FFCP PHASE1:Mm9::chr19:25580226..25580261,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=50796|HGNC=|MCL_coexpression_id=77|UniProt=|association_with_transcript=29bp_to_ENSMUST00000160814_5end|description=CAGE_peak_2_at_Dmrt1_5end|id=chr19:25580226..25580261,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000473!1.74e-38!14;UBERON:0003135!8.89e-36!15;UBERON:0000991!1.43e-34!18;UBERON:0005564!1.43e-34!18;UBERON:0003101!2.08e-33!16;UBERON:0000079!2.08e-33!16;UBERON:0004176!2.57e-31!17;UBERON:0009196!2.57e-31!17;UBERON:0009117!2.57e-31!17;UBERON:0003133!2.58e-29!24;UBERON:0005156!7.32e-27!26;UBERON:0000990!7.32e-27!26;UBERON:0002323!1.39e-15!37;UBERON:0004458!1.39e-15!37;UBERON:0003886!4.14e-15!38;UBERON:0002553!1.17e-14!39;UBERON:0000464!2.94e-09!57|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.43e-62,14;UBERON:0003135,2.30e-58,15;UBERON:0003101,1.11e-54,16;UBERON:0000079,1.11e-54,16;UBERON:0004176,1.97e-51,17;UBERON:0009196,1.97e-51,17;UBERON:0009117,1.97e-51,17;UBERON:0000991,1.53e-48,18;UBERON:0005564,1.53e-48,18;UBERON:0003133,3.01e-36,24;UBERON:0005156,2.09e-33,26;UBERON:0000990,2.09e-33,26;UBERON:0002323,2.94e-23,37;UBERON:0004458,2.94e-23,37;UBERON:0003886,1.26e-22,38;UBERON:0002553,5.03e-22,39|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.705532242814229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.596869416123452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,7.89170114157866,4.03694674318743,2.97825282822776,6.02798683866548,4.00395452780966,9.12363077650202,11.1489376713466,31.379256747392,48.5498764691041,12.5623742829523,8.92893019399383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p2@Dmrt1}} | ||
|EntrezGene=50796 | |||
|HGNC= | |||
|MCL_coexpression_id=77 | |||
|UniProt= | |||
|association_with_transcript=29bp_to_ENSMUST00000160814_5end | |||
|description=CAGE_peak_2_at_Dmrt1_5end | |||
|id=chr19:25580226..25580261,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.74e-38!14;UBERON:0003135!8.89e-36!15;UBERON:0000991!1.43e-34!18;UBERON:0005564!1.43e-34!18;UBERON:0003101!2.08e-33!16;UBERON:0000079!2.08e-33!16;UBERON:0004176!2.57e-31!17;UBERON:0009196!2.57e-31!17;UBERON:0009117!2.57e-31!17;UBERON:0003133!2.58e-29!24;UBERON:0005156!7.32e-27!26;UBERON:0000990!7.32e-27!26;UBERON:0002323!1.39e-15!37;UBERON:0004458!1.39e-15!37;UBERON:0003886!4.14e-15!38;UBERON:0002553!1.17e-14!39;UBERON:0000464!2.94e-09!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.43e-62,14;UBERON:0003135,2.30e-58,15;UBERON:0003101,1.11e-54,16;UBERON:0000079,1.11e-54,16;UBERON:0004176,1.97e-51,17;UBERON:0009196,1.97e-51,17;UBERON:0009117,1.97e-51,17;UBERON:0000991,1.53e-48,18;UBERON:0005564,1.53e-48,18;UBERON:0003133,3.01e-36,24;UBERON:0005156,2.09e-33,26;UBERON:0000990,2.09e-33,26;UBERON:0002323,2.94e-23,37;UBERON:0004458,2.94e-23,37;UBERON:0003886,1.26e-22,38;UBERON:0002553,5.03e-22,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.705532242814229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.596869416123452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,7.89170114157866,4.03694674318743,2.97825282822776,6.02798683866548,4.00395452780966,9.12363077650202,11.1489376713466,31.379256747392,48.5498764691041,12.5623742829523,8.92893019399383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p2@Dmrt1 | |||
}} |
Revision as of 17:16, 13 September 2013
Short description: | p2@Dmrt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dmrt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:77 |
Association with transcript: | 29bp_to_ENSMUST00000160814_5end |
EntrezGene: | Dmrt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.43e-62 | 14 |
male reproductive organ | 2.30e-58 | 15 |
male organism | 1.11e-54 | 16 |
male reproductive system | 1.11e-54 | 16 |
external genitalia | 1.97e-51 | 17 |
indifferent external genitalia | 1.97e-51 | 17 |
indifferent gonad | 1.97e-51 | 17 |
gonad | 1.53e-48 | 18 |
gonad primordium | 1.53e-48 | 18 |
reproductive organ | 3.01e-36 | 24 |
reproductive structure | 2.09e-33 | 26 |
reproductive system | 2.09e-33 | 26 |
body cavity | 2.94e-23 | 37 |
body cavity or lining | 2.94e-23 | 37 |
body cavity precursor | 1.26e-22 | 38 |
anatomical cavity | 5.03e-22 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.