FFCP PHASE1:Mm9::chr1:74063339..74063352,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=591|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:74063339..74063352,-|id=chr1:74063339..74063352,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,4.61e-11,3;CL:0000737,4.61e-11,3;CL:0000746,4.61e-11,3;CL:0000513,4.61e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!3.14e-12!18;UBERON:0000948!3.14e-12!18;UBERON:0005498!3.14e-12!18;UBERON:0004140!3.14e-12!18;UBERON:0009881!3.14e-12!18;UBERON:0004141!3.14e-12!18;UBERON:0003084!3.14e-12!18;UBERON:0007005!3.14e-12!18;UBERON:0004139!3.14e-12!18;UBERON:0004291!3.14e-12!18;UBERON:0004535!5.18e-12!23;UBERON:0001009!5.18e-12!23;UBERON:0005153!6.93e-11!17;UBERON:0004872!4.61e-08!33;UBERON:0002048!6.35e-08!14;UBERON:0000117!6.35e-08!14;UBERON:0000171!6.35e-08!14;UBERON:0000170!6.35e-08!14;UBERON:0005597!6.35e-08!14;UBERON:0000118!6.35e-08!14;UBERON:0004111!8.31e-08!122;UBERON:0003914!9.38e-08!47;UBERON:0005157!1.22e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.05e-25,18;UBERON:0000948,1.05e-25,18;UBERON:0005498,1.05e-25,18;UBERON:0004140,1.05e-25,18;UBERON:0009881,1.05e-25,18;UBERON:0004141,1.05e-25,18;UBERON:0003084,1.05e-25,18;UBERON:0007005,1.05e-25,18;UBERON:0004139,1.05e-25,18;UBERON:0004291,1.05e-25,18;UBERON:0004535,1.84e-25,23;UBERON:0001009,1.84e-25,23;UBERON:0004872,1.49e-17,33;UBERON:0003914,4.13e-12,47;UBERON:0003103,1.95e-10,43;UBERON:0000025,7.27e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.09843091367236,0.388859798148567,0.139986421625363,0,0,0,0,0,2.57880095944881,2.57836046138721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0.539703191637817,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0,0,0,0,0.125666591329675,0.741584903203122,6.2177723475562,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473489471170421,0,0.154267112887378,0.465067889500816,0.536546802799238,1.16765342367169,0.658239399653922,1.14917224855367,1.78351381000883,1.75439984910399,1.75640092232841,3.75777972529041,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.397912944082302,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0.147610147979602,0,0.370191491765402,0.889357881261447,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.554259570499814,0,0.162964976442026,0,0,0.335012514883631,0.476087281772027,0.390267295715598,0.157635144106191,0,0.318909537314974,0.81931657357869,0.518054945597687,1.01254341007058,0,0,0.491764273019036,0.827810238914197,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.98931751764888,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0.579568782096571,0.563047426353546,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,1.53030665655075,0,0.231867835620421|short_description=p@chr1:74063339..74063352,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=591 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:74063339..74063352,- | |||
|id=chr1:74063339..74063352,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,4.61e-11,3;CL:0000737,4.61e-11,3;CL:0000746,4.61e-11,3;CL:0000513,4.61e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!3.14e-12!18;UBERON:0000948!3.14e-12!18;UBERON:0005498!3.14e-12!18;UBERON:0004140!3.14e-12!18;UBERON:0009881!3.14e-12!18;UBERON:0004141!3.14e-12!18;UBERON:0003084!3.14e-12!18;UBERON:0007005!3.14e-12!18;UBERON:0004139!3.14e-12!18;UBERON:0004291!3.14e-12!18;UBERON:0004535!5.18e-12!23;UBERON:0001009!5.18e-12!23;UBERON:0005153!6.93e-11!17;UBERON:0004872!4.61e-08!33;UBERON:0002048!6.35e-08!14;UBERON:0000117!6.35e-08!14;UBERON:0000171!6.35e-08!14;UBERON:0000170!6.35e-08!14;UBERON:0005597!6.35e-08!14;UBERON:0000118!6.35e-08!14;UBERON:0004111!8.31e-08!122;UBERON:0003914!9.38e-08!47;UBERON:0005157!1.22e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.05e-25,18;UBERON:0000948,1.05e-25,18;UBERON:0005498,1.05e-25,18;UBERON:0004140,1.05e-25,18;UBERON:0009881,1.05e-25,18;UBERON:0004141,1.05e-25,18;UBERON:0003084,1.05e-25,18;UBERON:0007005,1.05e-25,18;UBERON:0004139,1.05e-25,18;UBERON:0004291,1.05e-25,18;UBERON:0004535,1.84e-25,23;UBERON:0001009,1.84e-25,23;UBERON:0004872,1.49e-17,33;UBERON:0003914,4.13e-12,47;UBERON:0003103,1.95e-10,43;UBERON:0000025,7.27e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.09843091367236,0.388859798148567,0.139986421625363,0,0,0,0,0,2.57880095944881,2.57836046138721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0.539703191637817,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0,0,0,0,0.125666591329675,0.741584903203122,6.2177723475562,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473489471170421,0,0.154267112887378,0.465067889500816,0.536546802799238,1.16765342367169,0.658239399653922,1.14917224855367,1.78351381000883,1.75439984910399,1.75640092232841,3.75777972529041,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.397912944082302,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0.147610147979602,0,0.370191491765402,0.889357881261447,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.554259570499814,0,0.162964976442026,0,0,0.335012514883631,0.476087281772027,0.390267295715598,0.157635144106191,0,0.318909537314974,0.81931657357869,0.518054945597687,1.01254341007058,0,0,0.491764273019036,0.827810238914197,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.98931751764888,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0.579568782096571,0.563047426353546,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,1.53030665655075,0,0.231867835620421 | |||
|short_description=p@chr1:74063339..74063352,- | |||
}} |
Revision as of 20:54, 13 September 2013
Short description: | p@chr1:74063339..74063352, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:74063339..74063352, - |
Coexpression cluster: | MCL_coexpression_mm9:591 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 4.61e-11 | 3 |
striated muscle cell | 4.61e-11 | 3 |
cardiac muscle cell | 4.61e-11 | 3 |
cardiac muscle myoblast | 4.61e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.05e-25 | 18 |
heart | 1.05e-25 | 18 |
primitive heart tube | 1.05e-25 | 18 |
primary heart field | 1.05e-25 | 18 |
anterior lateral plate mesoderm | 1.05e-25 | 18 |
heart tube | 1.05e-25 | 18 |
heart primordium | 1.05e-25 | 18 |
cardiac mesoderm | 1.05e-25 | 18 |
cardiogenic plate | 1.05e-25 | 18 |
heart rudiment | 1.05e-25 | 18 |
cardiovascular system | 1.84e-25 | 23 |
circulatory system | 1.84e-25 | 23 |
splanchnic layer of lateral plate mesoderm | 1.49e-17 | 33 |
epithelial tube | 4.13e-12 | 47 |
compound organ | 1.95e-10 | 43 |
tube | 7.27e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.