FFCP PHASE1:Mm9::chr17:37035264..37035284,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=224762|HGNC=|MCL_coexpression_id=58|UniProt=Q8R0K2|association_with_transcript=189bp_to_NM_146077,uc008cll.1_5end|description=CAGE_peak_2_at_Trim31_5end|id=chr17:37035264..37035284,+|ontology_enrichment_celltype=CL:0002563!2.39e-16!9;CL:0002251!2.39e-16!9;CL:0000239!4.33e-12!6;CL:0000677!4.33e-12!6;CL:0000212!4.33e-12!6;CL:0000584!4.33e-12!6;CL:0000075!3.21e-10!7;CL:0002076!5.33e-09!15;CL:0000066!5.46e-09!25;CL:0000473!2.64e-07!3;CL:0000627!2.64e-07!3;CL:0000682!2.64e-07!3|ontology_enrichment_celltype_v019_2=CL:0002563,1.52e-19,9;CL:0002251,1.52e-19,9;CL:0000239,1.18e-17,6;CL:0000677,1.18e-17,6;CL:0000584,1.18e-17,6;CL:0000075,4.89e-15,7;CL:0000066,2.30e-12,25;CL:0002076,3.30e-11,15;CL:0000682,2.40e-10,3;CL:0000223,4.39e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.14e-35!43;UBERON:0005409!1.52e-32!59;UBERON:0000344!4.62e-27!15;UBERON:0001242!2.11e-23!13;UBERON:0000060!2.11e-23!13;UBERON:0001262!2.11e-23!13;UBERON:0004786!2.11e-23!13;UBERON:0003350!2.39e-16!9;UBERON:0004808!2.39e-16!9;UBERON:0001277!2.39e-16!9;UBERON:0004923!2.47e-15!24;UBERON:0001007!9.33e-15!128;UBERON:0001555!9.33e-15!128;UBERON:0007026!9.33e-15!128;UBERON:0004119!2.25e-14!130;UBERON:0000925!2.25e-14!130;UBERON:0006595!2.25e-14!130;UBERON:0000485!5.31e-13!11;UBERON:0004921!6.89e-13!126;UBERON:0004185!6.89e-13!126;UBERON:0000331!7.35e-07!3;UBERON:0002116!7.35e-07!3;UBERON:0001204!7.35e-07!3;UBERON:0001168!7.35e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.55e-56,31;UBERON:0005409,2.10e-38,47;UBERON:0000344,9.26e-36,15;UBERON:0001242,3.30e-30,13;UBERON:0001262,3.30e-30,13;UBERON:0004786,3.30e-30,13;UBERON:0004923,3.33e-21,24;UBERON:0003350,1.52e-19,9;UBERON:0004808,1.52e-19,9;UBERON:0001277,1.52e-19,9;UBERON:0000485,9.34e-16,11;UBERON:0001007,4.81e-15,116;UBERON:0001555,4.81e-15,116;UBERON:0007026,4.81e-15,116;UBERON:0004119,1.08e-14,118;UBERON:0000925,1.08e-14,118;UBERON:0006595,1.08e-14,118;UBERON:0004921,1.18e-12,114;UBERON:0002108,4.13e-12,4;UBERON:0000331,1.14e-09,3;UBERON:0002116,1.14e-09,3;UBERON:0001204,1.14e-09,3;UBERON:0001168,1.14e-09,3;UBERON:0001962,4.73e-07,2;UBERON:0001961,4.73e-07,2;UBERON:0001744,4.73e-07,2|phase1_expression=0,6.63053274514786,9.09998478779072,1.51232105653415,2.00358291978539,6.5472916045637,9.81173090501208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67982572424835,5.27641346454491,9.18771142584032,8.61523992318149,9.9116767035509,3.04037471130198,3.52842181663903,7.98229838359097,0,0,0,1.44425809875637,1.49611180822643,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,2.3800550999719,0,0.232236671860439,1.67527699718721,1.4117846723634,1.11189021922435,1.14135375667535,3.32170343081158,1.31759163779209,2.76468729680296,1.98956472041151,0.779856348476481,3.59527763461689,2.59365659849633,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0,0,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.240390899039938,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.38581844092741,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Trim31}} | ||
|EntrezGene=224762 | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=Q8R0K2 | |||
|association_with_transcript=189bp_to_NM_146077,uc008cll.1_5end | |||
|description=CAGE_peak_2_at_Trim31_5end | |||
|id=chr17:37035264..37035284,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.39e-16!9;CL:0002251!2.39e-16!9;CL:0000239!4.33e-12!6;CL:0000677!4.33e-12!6;CL:0000212!4.33e-12!6;CL:0000584!4.33e-12!6;CL:0000075!3.21e-10!7;CL:0002076!5.33e-09!15;CL:0000066!5.46e-09!25;CL:0000473!2.64e-07!3;CL:0000627!2.64e-07!3;CL:0000682!2.64e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.52e-19,9;CL:0002251,1.52e-19,9;CL:0000239,1.18e-17,6;CL:0000677,1.18e-17,6;CL:0000584,1.18e-17,6;CL:0000075,4.89e-15,7;CL:0000066,2.30e-12,25;CL:0002076,3.30e-11,15;CL:0000682,2.40e-10,3;CL:0000223,4.39e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.14e-35!43;UBERON:0005409!1.52e-32!59;UBERON:0000344!4.62e-27!15;UBERON:0001242!2.11e-23!13;UBERON:0000060!2.11e-23!13;UBERON:0001262!2.11e-23!13;UBERON:0004786!2.11e-23!13;UBERON:0003350!2.39e-16!9;UBERON:0004808!2.39e-16!9;UBERON:0001277!2.39e-16!9;UBERON:0004923!2.47e-15!24;UBERON:0001007!9.33e-15!128;UBERON:0001555!9.33e-15!128;UBERON:0007026!9.33e-15!128;UBERON:0004119!2.25e-14!130;UBERON:0000925!2.25e-14!130;UBERON:0006595!2.25e-14!130;UBERON:0000485!5.31e-13!11;UBERON:0004921!6.89e-13!126;UBERON:0004185!6.89e-13!126;UBERON:0000331!7.35e-07!3;UBERON:0002116!7.35e-07!3;UBERON:0001204!7.35e-07!3;UBERON:0001168!7.35e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.55e-56,31;UBERON:0005409,2.10e-38,47;UBERON:0000344,9.26e-36,15;UBERON:0001242,3.30e-30,13;UBERON:0001262,3.30e-30,13;UBERON:0004786,3.30e-30,13;UBERON:0004923,3.33e-21,24;UBERON:0003350,1.52e-19,9;UBERON:0004808,1.52e-19,9;UBERON:0001277,1.52e-19,9;UBERON:0000485,9.34e-16,11;UBERON:0001007,4.81e-15,116;UBERON:0001555,4.81e-15,116;UBERON:0007026,4.81e-15,116;UBERON:0004119,1.08e-14,118;UBERON:0000925,1.08e-14,118;UBERON:0006595,1.08e-14,118;UBERON:0004921,1.18e-12,114;UBERON:0002108,4.13e-12,4;UBERON:0000331,1.14e-09,3;UBERON:0002116,1.14e-09,3;UBERON:0001204,1.14e-09,3;UBERON:0001168,1.14e-09,3;UBERON:0001962,4.73e-07,2;UBERON:0001961,4.73e-07,2;UBERON:0001744,4.73e-07,2 | |||
|phase1_expression=0,6.63053274514786,9.09998478779072,1.51232105653415,2.00358291978539,6.5472916045637,9.81173090501208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67982572424835,5.27641346454491,9.18771142584032,8.61523992318149,9.9116767035509,3.04037471130198,3.52842181663903,7.98229838359097,0,0,0,1.44425809875637,1.49611180822643,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,2.3800550999719,0,0.232236671860439,1.67527699718721,1.4117846723634,1.11189021922435,1.14135375667535,3.32170343081158,1.31759163779209,2.76468729680296,1.98956472041151,0.779856348476481,3.59527763461689,2.59365659849633,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0,0,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.240390899039938,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.38581844092741,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Trim31 | |||
}} |
Revision as of 14:29, 13 September 2013
Short description: | p2@Trim31 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Trim31_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | 189bp_to_NM_146077, uc008cll.1_5end |
EntrezGene: | Trim31 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.52e-19 | 9 |
epithelial cell of alimentary canal | 1.52e-19 | 9 |
brush border epithelial cell | 1.18e-17 | 6 |
gut absorptive cell | 1.18e-17 | 6 |
enterocyte | 1.18e-17 | 6 |
columnar/cuboidal epithelial cell | 4.89e-15 | 7 |
epithelial cell | 2.30e-12 | 25 |
endo-epithelial cell | 3.30e-11 | 15 |
M cell of gut | 2.40e-10 | 3 |
endodermal cell | 4.39e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.55e-56 | 31 |
gastrointestinal system | 2.10e-38 | 47 |
mucosa | 9.26e-36 | 15 |
intestinal mucosa | 3.30e-30 | 13 |
wall of intestine | 3.30e-30 | 13 |
gastrointestinal system mucosa | 3.30e-30 | 13 |
organ component layer | 3.33e-21 | 24 |
epithelium of mucosa | 1.52e-19 | 9 |
gastrointestinal system epithelium | 1.52e-19 | 9 |
intestinal epithelium | 1.52e-19 | 9 |
simple columnar epithelium | 9.34e-16 | 11 |
digestive system | 4.81e-15 | 116 |
digestive tract | 4.81e-15 | 116 |
primitive gut | 4.81e-15 | 116 |
endoderm-derived structure | 1.08e-14 | 118 |
endoderm | 1.08e-14 | 118 |
presumptive endoderm | 1.08e-14 | 118 |
subdivision of digestive tract | 1.18e-12 | 114 |
small intestine | 4.13e-12 | 4 |
ileal mucosa | 1.14e-09 | 3 |
ileum | 1.14e-09 | 3 |
mucosa of small intestine | 1.14e-09 | 3 |
wall of small intestine | 1.14e-09 | 3 |
gut-associated lymphoid tissue | 4.73e-07 | 2 |
mucosa-associated lymphoid tissue | 4.73e-07 | 2 |
lymphoid tissue | 4.73e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.