FFCP PHASE1:Mm9::chrX:39504205..39504245,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20843|HGNC=|MCL_coexpression_id=1145|UniProt=B7ZCD2|association_with_transcript=14bp_to_ENSMUST00000123245_5end|description=CAGE_peak_2_at_Stag2_5end|id=chrX:39504205..39504245,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.72e-08!29;UBERON:0001048!9.16e-08!147;UBERON:0003081!1.04e-07!88;UBERON:0002390!2.71e-07!45;UBERON:0003061!2.71e-07!45;UBERON:0000926!3.89e-07!193;UBERON:0004120!3.89e-07!193;UBERON:0006603!3.89e-07!193;UBERON:0005057!4.52e-07!51;UBERON:0002193!5.20e-07!48;UBERON:0002405!7.26e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0001048,3.91e-09,134;UBERON:0004177,2.99e-08,29;UBERON:0005057,2.99e-08,29;UBERON:0000153,1.00e-07,43;UBERON:0001041,1.23e-07,80;UBERON:0003081,2.06e-07,87;UBERON:0002390,2.14e-07,45;UBERON:0003061,2.14e-07,45;UBERON:0002193,4.15e-07,48;UBERON:0002405,4.15e-07,48|phase1_expression=3.84357233051505,1.04692622291808,0.454999239389536,0.30246421130683,0,0.671517087647559,0.700837921786577,5.68142623142936,18.4433226018683,22.7042590532334,3.25314139628459,3.27065851880879,3.93761678841773,4.63328132820686,13.3243904726265,25.1069331563384,27.2829132469977,12.4607555316504,16.1795031654772,12.3072999021429,2.89147186513637,21.1489726057886,21.1571829202538,2.71987118748791,2.2940928106717,1.14846392823004,0.430761996159075,1.29282739611533,2.09025761402011,1.26015064879965,0.886922042621219,10.1604907753541,7.99584223859941,0,3.46621943701529,5.65197794218874,5.10423390655923,10.4632907684227,7.813353445238,10.9939986234498,5.88231488031014,4.09827290975067,5.82612423637384,2.64383317748712,2.23029248682932,3.48738829107195,0,1.52617609466313,0.439372365468944,0.777719596297134,1.25987779462826,0,8.22134769682908,6.5282592781021,9.74672017513146,8.2323019531503,3.43840127926508,2.57836046138721,1.21389876515759,0.528990979272033,0.633831403506179,0.677689064138264,0.889294796111139,0,0.988866362566974,0,0.599200221036809,1.15265491596466,4.45865332926454,1.4850653216486,2.52389953621658,0.571301968807607,0.441737081903227,4.16468717330844,1.34183659425531,4.5960939330501,2.20231761998777,1.78762273319263,0.921639199537461,0.527545150920775,0.0914876436024097,1.56274011167028,0.279182999001381,0.56276261003168,1.22238598221448,1.76777151284201,3.13217697758026,0.559198337475902,1.74170244666323,6.42358260907677,8.40607017234866,0.860423876981386,0,0,1.29955283489534,3.13618820968135,3.08977724289854,5.11290967734173,2.85764605063156,3.88673531961374,3.80277233397037,1.28326477414318,2.54805239706646,0,1.94841936910093,1.01343946190039,1.01104889002957,4.79572294820052,25.1169747137757,2.3750742250372,10.7560902595004,7.61163695780353,5.07354093963329,5.87818298155228,8.81915303517786,2.38766523526383,1.23597483867187,3.47038456607788,12.3845477272982,9.38247729694973,13.9130156630048,14.0613823409214,0,2.92780797011547,1.67557365450764,2.04365644166873,31.1519323715393,17.9970819298022,28.2095904102204,1.79748767285787,1.37250180845588,2.38743269014442,0.869121600961382,0.767146371990992,1.24672826735736,1.78465389374533,9.980257657331,12.6895110022295,2.52722758433675,0.841767423545896,14.4433691688601,12.644615743841,16.0255295526761,17.1803492332715,17.8935992767992,21.0106501267154,8.90166383317424,2.06962696591213,14.2274875335676,24.3946843416487,20.4103304030181,9.64461222681329,23.0779216857246,15.6713474934975,16.4625709126355,12.7381930763836,29.4929538671559,21.3598762905214,19.6072814582959,14.9130556225561,17.12040237862,12.244220179349,13.2577051927718,9.83821158737019,8.79322543458056,8.60375595576509,5.90201483079162,7.00592054203017,6.58239399653922,6.56669856316381,3.24275238183423,2.63159977365598,3.51280184465681,3.08674763148855,2.52347938276953,3.49875682089567,0.991256348951394,2.64450566663544,15.9966187901425,16.4888037020911,13.0156135935314,11.2942773789072,7.56085349072559,6.27744566171445,3.32170343081158,5.27036655116835,6.28338022000674,4.77495532898762,5.06906626509712,0.898819408654221,3.8904848977445,2.98711909881551,1.70701110857774,16.2232887905815,9.01661885384643,11.8117770150282,14.3524840504043,7.78507600782536,5.12215950706484,2.36176236767363,1.41298855057237,2.71473760627961,2.37162101669719,28.1968228660199,22.9974024282448,25.8591429242582,30.0232979654984,22.1882986972223,18.8423130318251,16.686375972147,15.8892522239535,10.7078951143352,12.9391385874619,10.7920874823866,2.49630138491648,4.04126204715379,2.69096120282868,3.37710464954357,6.09685527549795,16.1067700004912,19.8817271259272,21.5576258934489,22.7649540839847,19.4307258632506,12.8543566078447,6.43941037930736,18.9162172927429,14.8381342064679,8.77001227616179,5.73521601505083,5.00786447411097,7.37710198765709,6.03165135757089,3.26343410291226,0.983528546038072,2.48343071674259,1.76605648986571,1.64096361229084,4.91804836130026,4.03953483526997,10.0962630213202,15.2271110275689,7.75524231838076,6.69112634267146,4.67877215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| ||
|EntrezGene=20843 | |||
|HGNC= | |||
|MCL_coexpression_id=1145 | |||
|UniProt=B7ZCD2 | |||
|association_with_transcript=14bp_to_ENSMUST00000123245_5end | |||
|description=CAGE_peak_2_at_Stag2_5end | |||
|id=chrX:39504205..39504245,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.72e-08!29;UBERON:0001048!9.16e-08!147;UBERON:0003081!1.04e-07!88;UBERON:0002390!2.71e-07!45;UBERON:0003061!2.71e-07!45;UBERON:0000926!3.89e-07!193;UBERON:0004120!3.89e-07!193;UBERON:0006603!3.89e-07!193;UBERON:0005057!4.52e-07!51;UBERON:0002193!5.20e-07!48;UBERON:0002405!7.26e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,3.91e-09,134;UBERON:0004177,2.99e-08,29;UBERON:0005057,2.99e-08,29;UBERON:0000153,1.00e-07,43;UBERON:0001041,1.23e-07,80;UBERON:0003081,2.06e-07,87;UBERON:0002390,2.14e-07,45;UBERON:0003061,2.14e-07,45;UBERON:0002193,4.15e-07,48;UBERON:0002405,4.15e-07,48 | |||
|phase1_expression=3.84357233051505,1.04692622291808,0.454999239389536,0.30246421130683,0,0.671517087647559,0.700837921786577,5.68142623142936,18.4433226018683,22.7042590532334,3.25314139628459,3.27065851880879,3.93761678841773,4.63328132820686,13.3243904726265,25.1069331563384,27.2829132469977,12.4607555316504,16.1795031654772,12.3072999021429,2.89147186513637,21.1489726057886,21.1571829202538,2.71987118748791,2.2940928106717,1.14846392823004,0.430761996159075,1.29282739611533,2.09025761402011,1.26015064879965,0.886922042621219,10.1604907753541,7.99584223859941,0,3.46621943701529,5.65197794218874,5.10423390655923,10.4632907684227,7.813353445238,10.9939986234498,5.88231488031014,4.09827290975067,5.82612423637384,2.64383317748712,2.23029248682932,3.48738829107195,0,1.52617609466313,0.439372365468944,0.777719596297134,1.25987779462826,0,8.22134769682908,6.5282592781021,9.74672017513146,8.2323019531503,3.43840127926508,2.57836046138721,1.21389876515759,0.528990979272033,0.633831403506179,0.677689064138264,0.889294796111139,0,0.988866362566974,0,0.599200221036809,1.15265491596466,4.45865332926454,1.4850653216486,2.52389953621658,0.571301968807607,0.441737081903227,4.16468717330844,1.34183659425531,4.5960939330501,2.20231761998777,1.78762273319263,0.921639199537461,0.527545150920775,0.0914876436024097,1.56274011167028,0.279182999001381,0.56276261003168,1.22238598221448,1.76777151284201,3.13217697758026,0.559198337475902,1.74170244666323,6.42358260907677,8.40607017234866,0.860423876981386,0,0,1.29955283489534,3.13618820968135,3.08977724289854,5.11290967734173,2.85764605063156,3.88673531961374,3.80277233397037,1.28326477414318,2.54805239706646,0,1.94841936910093,1.01343946190039,1.01104889002957,4.79572294820052,25.1169747137757,2.3750742250372,10.7560902595004,7.61163695780353,5.07354093963329,5.87818298155228,8.81915303517786,2.38766523526383,1.23597483867187,3.47038456607788,12.3845477272982,9.38247729694973,13.9130156630048,14.0613823409214,0,2.92780797011547,1.67557365450764,2.04365644166873,31.1519323715393,17.9970819298022,28.2095904102204,1.79748767285787,1.37250180845588,2.38743269014442,0.869121600961382,0.767146371990992,1.24672826735736,1.78465389374533,9.980257657331,12.6895110022295,2.52722758433675,0.841767423545896,14.4433691688601,12.644615743841,16.0255295526761,17.1803492332715,17.8935992767992,21.0106501267154,8.90166383317424,2.06962696591213,14.2274875335676,24.3946843416487,20.4103304030181,9.64461222681329,23.0779216857246,15.6713474934975,16.4625709126355,12.7381930763836,29.4929538671559,21.3598762905214,19.6072814582959,14.9130556225561,17.12040237862,12.244220179349,13.2577051927718,9.83821158737019,8.79322543458056,8.60375595576509,5.90201483079162,7.00592054203017,6.58239399653922,6.56669856316381,3.24275238183423,2.63159977365598,3.51280184465681,3.08674763148855,2.52347938276953,3.49875682089567,0.991256348951394,2.64450566663544,15.9966187901425,16.4888037020911,13.0156135935314,11.2942773789072,7.56085349072559,6.27744566171445,3.32170343081158,5.27036655116835,6.28338022000674,4.77495532898762,5.06906626509712,0.898819408654221,3.8904848977445,2.98711909881551,1.70701110857774,16.2232887905815,9.01661885384643,11.8117770150282,14.3524840504043,7.78507600782536,5.12215950706484,2.36176236767363,1.41298855057237,2.71473760627961,2.37162101669719,28.1968228660199,22.9974024282448,25.8591429242582,30.0232979654984,22.1882986972223,18.8423130318251,16.686375972147,15.8892522239535,10.7078951143352,12.9391385874619,10.7920874823866,2.49630138491648,4.04126204715379,2.69096120282868,3.37710464954357,6.09685527549795,16.1067700004912,19.8817271259272,21.5576258934489,22.7649540839847,19.4307258632506,12.8543566078447,6.43941037930736,18.9162172927429,14.8381342064679,8.77001227616179,5.73521601505083,5.00786447411097,7.37710198765709,6.03165135757089,3.26343410291226,0.983528546038072,2.48343071674259,1.76605648986571,1.64096361229084,4.91804836130026,4.03953483526997,10.0962630213202,15.2271110275689,7.75524231838076,6.69112634267146,4.67877215573028,4.24614796183249,10.9298889452221,6.72188473196017,7.11518000303742,2.57057053137446,7.80670468645477,5.52003371368491,9.93610452056814,8.24850614862677,1.32745138339963,10.4395673546642,5.44182402536552,5.09233715340925,1.47650946440386,10.1453598821496,5.94385074286909,3.63533729477506,5.34746067577082,3.47640433729398,0,0,2.04263763452273,14.2248264284735,1.16422815404479,5.5727629108214,10.4630737848941,5.17269571046005,5.26556865926787,1.8267896946876,3.52007562095566,1.69465656691056,0.882113592219848,3.62749756471256,14.2088695492397,11.3388298864933,8.35606408021955,5.9090723908222,4.08073171281791,2.78137953015765,14.3531539870196,14.6534676253888,21.4825651748866,27.5017947226849,25.4251263561107,16.0144721244566,20.5673900292565,23.7917468950219,21.9737958349034,0,14.3932877079417,15.8589184358942,10.8005340821801,8.57262013659322,11.3548533148012,7.95699643670442,6.61227645802687,1.30877970992015,4.01806417204558,3.1066965654346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| |||
|short_description=p2@Stag2 | |||
}} |
Revision as of 19:48, 14 September 2013
Short description: | p2@Stag2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Stag2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1145 |
Association with transcript: | 14bp_to_ENSMUST00000123245_5end |
EntrezGene: | Stag2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primordium | 3.91e-09 | 134 |
hemopoietic organ | 2.99e-08 | 29 |
immune organ | 2.99e-08 | 29 |
anterior region of body | 1.00e-07 | 43 |
foregut | 1.23e-07 | 80 |
lateral plate mesoderm | 2.06e-07 | 87 |
hematopoietic system | 2.14e-07 | 45 |
blood island | 2.14e-07 | 45 |
hemolymphoid system | 4.15e-07 | 48 |
immune system | 4.15e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.