FFCP PHASE1:Mm9::chr2:25978289..25978358,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67991|HGNC=|MCL_coexpression_id=303|UniProt=Q9DCM7,A2ARL3,A2ARL2|association_with_transcript=0bp_to_ENSMUST00000028300,ENSMUST00000140993,ENSMUST00000149408,NM_026495,uc008iuc.1_5end|description=CAGE_peak_1_at_Nacc2_5end|id=chr2:25978289..25978358,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003076!3.13e-07!12;UBERON:0003057!3.13e-07!12;UBERON:0007023!7.93e-07!51;UBERON:0004111!8.90e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0003076,3.04e-07,12;UBERON:0003057,3.04e-07,12;UBERON:0007023,7.72e-07,51|phase1_expression=3.52327463630547,10.1202868215415,11.8299802241279,11.7961042409664,9.01612313903425,6.04365378882803,4.90586545250604,0,0,0,0,0,0.171200729931206,0,2.6648780945253,0.202475267389826,0.699561878128147,0.315462165358238,0.411343300817216,1.27316895539409,9.26971862646661,0.0992909512008853,0,3.67982572424835,5.73523202667925,7.46501553349526,7.32295393470427,5.817723282519,6.08074942260396,7.05684363327806,4.21287970245079,4.44521471421742,4.30545351309199,0,1.44425809875637,2.99222361645286,3.47087905646027,0,0,0,0,0,0,10.7012295279241,14.5982780956101,13.7660064121261,25.0365230191373,30.9595722060234,46.7931569224425,35.3862416315196,17.358316281545,28.7505128729943,0,0,0,4.11615097657515,11.747871037489,10.3134418455488,1.82084814773638,1.05798195854407,1.26766280701236,7.45457970552091,14.2287167377782,26.0970918011606,34.6103226898441,28.419204597844,46.7376172408711,62.2433654620918,0.518448061542388,0.945041568321835,0.420649922702764,25.4229376119385,23.6329338818226,0.979926393719632,0.575072826109418,2.75765635983006,31.9336054898227,37.9231394113008,32.2573719838111,2.1101806036831,1.46380229763855,1.04182674111352,39.0856198601933,16.3201156909187,26.586895113165,11.1958862479994,10.3931326983345,5.77838282058432,3.02904773332736,5.51672388779534,8.11620568364698,3.44169550792555,1.3599426674155,8.63525106620507,11.695975514058,8.96053774194671,6.17955448579708,25.9054090318648,16.8860902991865,15.1936017039446,7.46470124816407,15.3991772897181,20.3844191765317,14.2213340630666,2.38140145112336,5.57391704045217,3.53867111510348,6.62266502370548,2.33044095282455,14.6957717674177,1.38788261412909,1.82679286987285,2.99800146432876,3.76806601381556,5.64425794251383,11.0586600370114,5.43828929015623,13.013942122792,3.5384422077995,5.82360659810673,4.41683036920787,4.84875253135222,3.72783522436244,21.958559775866,25.1336048176146,7.40825460104915,0.359445373517761,0,0.127070227073065,21.8694333531041,8.23501085073528,2.76439574648302,8.69121600961382,6.64860189058859,18.4931359658008,13.4660248346239,4.88828946481518,6.59356944233493,5.30717792710717,8.20723237957248,0.910843100738926,2.29902104433473,3.06105620669094,2.26057226753573,3.12967896096108,3.33095672740609,2.71735001223214,8.01980449290949,0.646703978798527,1.32374256117473,2.81521798662318,0.43839146485515,1.11218899690239,3.1342694986995,2.46938563689532,2.58744546864041,0,0,0.852490498186778,2.27838349789052,1.17263029990548,3.24111710629827,4.97163944728941,3.54175617145327,2.77680803197281,4.88321283975857,4.56064782379353,3.50296027101508,5.75959474697182,4.59668899421467,6.64764238276017,7.30999937126662,7.68425403518677,6.30770168173747,6.72927835405207,1.23485534855141,9.58214470653014,11.9002754998595,1.91959425481711,2.32236671860439,3.99489130098489,7.05892336181699,7.56085349072559,7.98947629672748,12.3377556001573,6.58795818896044,7.79139147280835,6.76452004939913,9.74820435595601,12.5834717211591,9.07779809473716,6.96994456390285,1.70701110857774,2.74196430263349,4.50830942692322,3.66572390121566,3.49114476901726,4.97964321221262,9.73842671713562,10.0374900626129,10.3619160375307,10.2419646055094,7.11486305009157,0.667380422864376,1.76903095601883,3.14806957338795,3.44862206360455,4.3411888755435,2.5462585178142,3.16465751195892,2.7562988551756,3.56929837144506,5.75072826109418,6.69853705803306,5.92871578917665,6.31447194867779,8.43167843552987,4.82443521363367,7.20537441649758,1.89491411770485,2.28150967018836,3.05541154395339,2.34690248288502,4.18765643604539,3.33261097240419,7.02481132288076,4.88668946729192,5.75808193086815,9.72674088810671,7.04612253277673,6.90739927463582,7.23245292907558,7.53956419696361,17.9488875660174,4.91764273019036,3.86311444826625,29.0596567877903,24.6144541843627,4.26230857979356,10.6037789425837,2.2085575359138,1.56175497718655,1.29254038639679,3.34556317133573,3.56477878531831,5.94460714656548,1.61924280669958,2.92255857911312,2.76701444562566,17.9939937196212,11.639086987078,3.73937767701236,4.23506094319298,16.9919226661712,7.96470830039777,1.45668381692989,3.93020624054176,2.82907619633847,3.83892460745005,4.30409207121498,4.13485269069154,6.18007340111759,3.56497378384721,5.37262488490887,5.27093042874994,3.09406629744561,5.10659408630682,2.16073312837572,1.68166288917581,3.85806663056866,2.12808280370728,3.92411398724555,5.265568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| ||
|EntrezGene=67991 | |||
|HGNC= | |||
|MCL_coexpression_id=303 | |||
|UniProt=Q9DCM7,A2ARL3,A2ARL2 | |||
|association_with_transcript=0bp_to_ENSMUST00000028300,ENSMUST00000140993,ENSMUST00000149408,NM_026495,uc008iuc.1_5end | |||
|description=CAGE_peak_1_at_Nacc2_5end | |||
|id=chr2:25978289..25978358,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!3.13e-07!12;UBERON:0003057!3.13e-07!12;UBERON:0007023!7.93e-07!51;UBERON:0004111!8.90e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,3.04e-07,12;UBERON:0003057,3.04e-07,12;UBERON:0007023,7.72e-07,51 | |||
|phase1_expression=3.52327463630547,10.1202868215415,11.8299802241279,11.7961042409664,9.01612313903425,6.04365378882803,4.90586545250604,0,0,0,0,0,0.171200729931206,0,2.6648780945253,0.202475267389826,0.699561878128147,0.315462165358238,0.411343300817216,1.27316895539409,9.26971862646661,0.0992909512008853,0,3.67982572424835,5.73523202667925,7.46501553349526,7.32295393470427,5.817723282519,6.08074942260396,7.05684363327806,4.21287970245079,4.44521471421742,4.30545351309199,0,1.44425809875637,2.99222361645286,3.47087905646027,0,0,0,0,0,0,10.7012295279241,14.5982780956101,13.7660064121261,25.0365230191373,30.9595722060234,46.7931569224425,35.3862416315196,17.358316281545,28.7505128729943,0,0,0,4.11615097657515,11.747871037489,10.3134418455488,1.82084814773638,1.05798195854407,1.26766280701236,7.45457970552091,14.2287167377782,26.0970918011606,34.6103226898441,28.419204597844,46.7376172408711,62.2433654620918,0.518448061542388,0.945041568321835,0.420649922702764,25.4229376119385,23.6329338818226,0.979926393719632,0.575072826109418,2.75765635983006,31.9336054898227,37.9231394113008,32.2573719838111,2.1101806036831,1.46380229763855,1.04182674111352,39.0856198601933,16.3201156909187,26.586895113165,11.1958862479994,10.3931326983345,5.77838282058432,3.02904773332736,5.51672388779534,8.11620568364698,3.44169550792555,1.3599426674155,8.63525106620507,11.695975514058,8.96053774194671,6.17955448579708,25.9054090318648,16.8860902991865,15.1936017039446,7.46470124816407,15.3991772897181,20.3844191765317,14.2213340630666,2.38140145112336,5.57391704045217,3.53867111510348,6.62266502370548,2.33044095282455,14.6957717674177,1.38788261412909,1.82679286987285,2.99800146432876,3.76806601381556,5.64425794251383,11.0586600370114,5.43828929015623,13.013942122792,3.5384422077995,5.82360659810673,4.41683036920787,4.84875253135222,3.72783522436244,21.958559775866,25.1336048176146,7.40825460104915,0.359445373517761,0,0.127070227073065,21.8694333531041,8.23501085073528,2.76439574648302,8.69121600961382,6.64860189058859,18.4931359658008,13.4660248346239,4.88828946481518,6.59356944233493,5.30717792710717,8.20723237957248,0.910843100738926,2.29902104433473,3.06105620669094,2.26057226753573,3.12967896096108,3.33095672740609,2.71735001223214,8.01980449290949,0.646703978798527,1.32374256117473,2.81521798662318,0.43839146485515,1.11218899690239,3.1342694986995,2.46938563689532,2.58744546864041,0,0,0.852490498186778,2.27838349789052,1.17263029990548,3.24111710629827,4.97163944728941,3.54175617145327,2.77680803197281,4.88321283975857,4.56064782379353,3.50296027101508,5.75959474697182,4.59668899421467,6.64764238276017,7.30999937126662,7.68425403518677,6.30770168173747,6.72927835405207,1.23485534855141,9.58214470653014,11.9002754998595,1.91959425481711,2.32236671860439,3.99489130098489,7.05892336181699,7.56085349072559,7.98947629672748,12.3377556001573,6.58795818896044,7.79139147280835,6.76452004939913,9.74820435595601,12.5834717211591,9.07779809473716,6.96994456390285,1.70701110857774,2.74196430263349,4.50830942692322,3.66572390121566,3.49114476901726,4.97964321221262,9.73842671713562,10.0374900626129,10.3619160375307,10.2419646055094,7.11486305009157,0.667380422864376,1.76903095601883,3.14806957338795,3.44862206360455,4.3411888755435,2.5462585178142,3.16465751195892,2.7562988551756,3.56929837144506,5.75072826109418,6.69853705803306,5.92871578917665,6.31447194867779,8.43167843552987,4.82443521363367,7.20537441649758,1.89491411770485,2.28150967018836,3.05541154395339,2.34690248288502,4.18765643604539,3.33261097240419,7.02481132288076,4.88668946729192,5.75808193086815,9.72674088810671,7.04612253277673,6.90739927463582,7.23245292907558,7.53956419696361,17.9488875660174,4.91764273019036,3.86311444826625,29.0596567877903,24.6144541843627,4.26230857979356,10.6037789425837,2.2085575359138,1.56175497718655,1.29254038639679,3.34556317133573,3.56477878531831,5.94460714656548,1.61924280669958,2.92255857911312,2.76701444562566,17.9939937196212,11.639086987078,3.73937767701236,4.23506094319298,16.9919226661712,7.96470830039777,1.45668381692989,3.93020624054176,2.82907619633847,3.83892460745005,4.30409207121498,4.13485269069154,6.18007340111759,3.56497378384721,5.37262488490887,5.27093042874994,3.09406629744561,5.10659408630682,2.16073312837572,1.68166288917581,3.85806663056866,2.12808280370728,3.92411398724555,5.26556865926787,3.95804433848979,1.17335854031855,2.96564899209348,5.07215315526412,4.45192882941996,4.19807509409354,5.97097956788743,4.29740438411291,2.79039529566604,9.91034844541493,34.3036808719443,2.05045056957423,3.09580301944834,1.48155621895769,2.0720530270516,1.6403307326523,2.28778173206523,1.01987057996313,0,0.829199842826543,8.59203556213602,1.10717597753397,5.69294507955176,4.10420295122845,5.85447228840512,5.8957892211468,9.44050424693745,10.1663750542163,10.2084817373772,11.4061176496778,12.4267862617385,3.94585057078933,3.73791365109947,3.14371131868485,7.38914515707381,6.19967152693109,6.42033276864957,6.21993364822496,11.978803405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| |||
|short_description=p1@Nacc2 | |||
}} | |||
Revision as of 23:30, 13 September 2013
| Short description: | p1@Nacc2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Nacc2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:303 |
| Association with transcript: | 0bp_to_ENSMUST00000028300, ENSMUST00000140993, ENSMUST00000149408, NM_026495, uc008iuc.1_5end |
| EntrezGene: | Nacc2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| posterior neural tube | 3.04e-07 | 12 |
| chordal neural plate | 3.04e-07 | 12 |
| adult organism | 7.72e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
