FFCP PHASE1:Mm9::chr19:6105774..6105789,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=381204|HGNC=|MCL_coexpression_id=126|UniProt=Q7M758|association_with_transcript=0bp_to_ENSMUST00000044451_5end|description=CAGE_peak_1_at_Naaladl1_5end|id=chr19:6105774..6105789,+|ontology_enrichment_celltype=CL:0002563!8.67e-09!9;CL:0002251!8.67e-09!9;CL:0000239!2.82e-07!6;CL:0000677!2.82e-07!6;CL:0000212!2.82e-07!6;CL:0000584!2.82e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,1.50e-10,9;CL:0002251,1.50e-10,9;CL:0000239,1.13e-08,6;CL:0000677,1.13e-08,6;CL:0000584,1.13e-08,6;CL:0000075,3.05e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.95e-20!43;UBERON:0005409!8.08e-15!59;UBERON:0000344!9.93e-15!15;UBERON:0001242!7.93e-13!13;UBERON:0000060!7.93e-13!13;UBERON:0001262!7.93e-13!13;UBERON:0004786!7.93e-13!13;UBERON:0004923!4.77e-09!24;UBERON:0003350!8.67e-09!9;UBERON:0004808!8.67e-09!9;UBERON:0001277!8.67e-09!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.21e-31,31;UBERON:0005409,2.36e-19,47;UBERON:0000344,6.11e-18,15;UBERON:0001242,1.42e-15,13;UBERON:0001262,1.42e-15,13;UBERON:0004786,1.42e-15,13;UBERON:0003350,1.50e-10,9;UBERON:0004808,1.50e-10,9;UBERON:0001277,1.50e-10,9;UBERON:0004923,1.63e-10,24;UBERON:0000485,3.33e-08,11;UBERON:0004119,4.55e-07,118;UBERON:0000925,4.55e-07,118;UBERON:0006595,4.55e-07,118;UBERON:0001007,6.80e-07,116;UBERON:0001555,6.80e-07,116;UBERON:0007026,6.80e-07,116;UBERON:0002108,9.93e-07,4|phase1_expression=0,1333.78400799764,1126.57811672849,921.910916063218,1171.59511234451,160.660463219679,172.639741400093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,532.774767902044,830.232188182088,1305.80348639756,930.876673699761,792.5031938187,5187.06928090064,2310.8642597688,1297.12348733353,0,0,0,9.24325183204079,14.9611180822643,6.94175811292055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,38.9031043764953,0,0,0,0,0,0,0,0,0,0,98.6548720772678,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,78.2845397116113,0,0,1122.98921469697,0,0,0,0,0.457500602818626,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,221.711003382128,170.306164931323,0.213288250535234,0.464473343720877,9.665059599157,110.320887968968,253.066213895462,397.191107323024,762.093672840486,621.244457218969,382.78352300281,419.400243062746,422.292212700014,901.515866880184,596.324879604281,571.336312966779,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.738050739898011,0.156998727841375,0.740382983530803,0,1.16791574001266,4.32429789249047,2.9232074610031,5.27436315610108,5.06472035480075,3.56476192493988,1.72617682470486,1.13494658742525,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0.614870295887855,15.247269296925,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,1.17335854031855,0.63549621259146,0,0,0,0,0,0,792.536394796564,0,0,0,0,0,0,0,0,0,0,0,0,0,0.972048067396211,0.418176592028937,4.14888871117737,0,0,0,7.12882353104861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,2.43106717068294,1.04806581313991,3.12533964365024,14.446037307105,17.1009097508282,15.4041220604071,13.1402550117175,18.5039888919875,14.5242282867279,11.7051884337353,12.22880410933,13.3250287977023,13.3362233559261,13.6743504614929,11.9603716687497,13.1867488257058,11.481515770483,11.3146853287187,11.0034999818789,14.7830437767339,14.2439488299682,12.3283288344083,12.6921911837515,14.6342378298218,9.99664903463803,12.765586701511,16.8342681497322,11.3889617399207,15.0711858034612,12.6861623382604,11.6202630889474,10.0311437710194,0,23.8610240614317,28.3629791343754,0,0,0|short_description=p1@Naaladl1}} | ||
|EntrezGene=381204 | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|UniProt=Q7M758 | |||
|association_with_transcript=0bp_to_ENSMUST00000044451_5end | |||
|description=CAGE_peak_1_at_Naaladl1_5end | |||
|id=chr19:6105774..6105789,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.67e-09!9;CL:0002251!8.67e-09!9;CL:0000239!2.82e-07!6;CL:0000677!2.82e-07!6;CL:0000212!2.82e-07!6;CL:0000584!2.82e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.50e-10,9;CL:0002251,1.50e-10,9;CL:0000239,1.13e-08,6;CL:0000677,1.13e-08,6;CL:0000584,1.13e-08,6;CL:0000075,3.05e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.95e-20!43;UBERON:0005409!8.08e-15!59;UBERON:0000344!9.93e-15!15;UBERON:0001242!7.93e-13!13;UBERON:0000060!7.93e-13!13;UBERON:0001262!7.93e-13!13;UBERON:0004786!7.93e-13!13;UBERON:0004923!4.77e-09!24;UBERON:0003350!8.67e-09!9;UBERON:0004808!8.67e-09!9;UBERON:0001277!8.67e-09!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.21e-31,31;UBERON:0005409,2.36e-19,47;UBERON:0000344,6.11e-18,15;UBERON:0001242,1.42e-15,13;UBERON:0001262,1.42e-15,13;UBERON:0004786,1.42e-15,13;UBERON:0003350,1.50e-10,9;UBERON:0004808,1.50e-10,9;UBERON:0001277,1.50e-10,9;UBERON:0004923,1.63e-10,24;UBERON:0000485,3.33e-08,11;UBERON:0004119,4.55e-07,118;UBERON:0000925,4.55e-07,118;UBERON:0006595,4.55e-07,118;UBERON:0001007,6.80e-07,116;UBERON:0001555,6.80e-07,116;UBERON:0007026,6.80e-07,116;UBERON:0002108,9.93e-07,4 | |||
|phase1_expression=0,1333.78400799764,1126.57811672849,921.910916063218,1171.59511234451,160.660463219679,172.639741400093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,532.774767902044,830.232188182088,1305.80348639756,930.876673699761,792.5031938187,5187.06928090064,2310.8642597688,1297.12348733353,0,0,0,9.24325183204079,14.9611180822643,6.94175811292055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,38.9031043764953,0,0,0,0,0,0,0,0,0,0,98.6548720772678,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,78.2845397116113,0,0,1122.98921469697,0,0,0,0,0.457500602818626,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,221.711003382128,170.306164931323,0.213288250535234,0.464473343720877,9.665059599157,110.320887968968,253.066213895462,397.191107323024,762.093672840486,621.244457218969,382.78352300281,419.400243062746,422.292212700014,901.515866880184,596.324879604281,571.336312966779,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.738050739898011,0.156998727841375,0.740382983530803,0,1.16791574001266,4.32429789249047,2.9232074610031,5.27436315610108,5.06472035480075,3.56476192493988,1.72617682470486,1.13494658742525,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0.614870295887855,15.247269296925,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,1.17335854031855,0.63549621259146,0,0,0,0,0,0,792.536394796564,0,0,0,0,0,0,0,0,0,0,0,0,0,0.972048067396211,0.418176592028937,4.14888871117737,0,0,0,7.12882353104861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,2.43106717068294,1.04806581313991,3.12533964365024,14.446037307105,17.1009097508282,15.4041220604071,13.1402550117175,18.5039888919875,14.5242282867279,11.7051884337353,12.22880410933,13.3250287977023,13.3362233559261,13.6743504614929,11.9603716687497,13.1867488257058,11.481515770483,11.3146853287187,11.0034999818789,14.7830437767339,14.2439488299682,12.3283288344083,12.6921911837515,14.6342378298218,9.99664903463803,12.765586701511,16.8342681497322,11.3889617399207,15.0711858034612,12.6861623382604,11.6202630889474,10.0311437710194,0,23.8610240614317,28.3629791343754,0,0,0 | |||
|short_description=p1@Naaladl1 | |||
}} |
Revision as of 18:19, 13 September 2013
Short description: | p1@Naaladl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Naaladl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | 0bp_to_ENSMUST00000044451_5end |
EntrezGene: | Naaladl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.50e-10 | 9 |
epithelial cell of alimentary canal | 1.50e-10 | 9 |
brush border epithelial cell | 1.13e-08 | 6 |
gut absorptive cell | 1.13e-08 | 6 |
enterocyte | 1.13e-08 | 6 |
columnar/cuboidal epithelial cell | 3.05e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.21e-31 | 31 |
gastrointestinal system | 2.36e-19 | 47 |
mucosa | 6.11e-18 | 15 |
intestinal mucosa | 1.42e-15 | 13 |
wall of intestine | 1.42e-15 | 13 |
gastrointestinal system mucosa | 1.42e-15 | 13 |
epithelium of mucosa | 1.50e-10 | 9 |
gastrointestinal system epithelium | 1.50e-10 | 9 |
intestinal epithelium | 1.50e-10 | 9 |
organ component layer | 1.63e-10 | 24 |
simple columnar epithelium | 3.33e-08 | 11 |
endoderm-derived structure | 4.55e-07 | 118 |
endoderm | 4.55e-07 | 118 |
presumptive endoderm | 4.55e-07 | 118 |
digestive system | 6.80e-07 | 116 |
digestive tract | 6.80e-07 | 116 |
primitive gut | 6.80e-07 | 116 |
small intestine | 9.93e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.