FFCP PHASE1:Mm9::chr1:170362322..170362333,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18514|HGNC=|UniProt=P41778|association_with_transcript=-22bp_to_ENSMUST00000072863_5end|description=CAGE_peak_8_at_Pbx1_5end|id=chr1:170362322..170362333,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!2.57e-08!50;UBERON:0006238!2.57e-08!50;UBERON:0000033!2.62e-08!63;UBERON:0002346!7.06e-08!71;UBERON:0003075!7.06e-08!71;UBERON:0007284!7.06e-08!71;UBERON:0002616!7.65e-08!49;UBERON:0004121!4.23e-07!102;UBERON:0000924!4.23e-07!102;UBERON:0006601!4.23e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.58e-10,92;UBERON:0000073,4.46e-07,54|phase1_expression=2.5623815536767,0.348975407639361,0.454999239389536,0.90739263392049,0,1.6787927191189,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,1.11994695955385,0.68822784320151,0,0.86152399231815,0.215471232685889,1.52018735565099,1.26015064879965,0.443461021310609,0,0,0,1.44425809875637,0.997407872150954,1.83752420636132,5.4409111995798,0.7813353445238,7.32933241563318,9.99993529652724,8.87959130445979,6.311634589405,4.15459499319405,2.93993100536592,2.75320128242522,4.69434806608824,0.436050312760893,1.31811709640683,1.1665793944457,1.25987779462826,1.43752564364972,0,0,0,0.771778308107841,2.0057340795713,3.6097046459421,2.83243045203437,5.28990979272033,4.43681982454325,1.0165335962074,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,1.8664130215526,3.64516033495565,2.3135745748652,2.85650984403804,0.883474163806454,3.79721477566358,2.87536413054709,6.43453150627015,4.40463523997555,4.72443150915195,3.84016333140609,2.1101806036831,2.10421580285542,2.6045668527838,0.837548997004143,2.8138130501584,2.59757021220577,1.76777151284201,1.85083185038834,1.3047961207771,0.151452386666368,0.377857800533928,3.47837386442013,0,0,0,0,0,1.82577746171277,1.1930122580464,0.519572009205738,0.35333957451034,2.11265129665021,1.28326477414318,0,0,1.29894624606728,0.253359865475099,0.505524445014783,1.37020655662872,0.258937883647172,3.26572705942614,2.60227990149204,3.65358573974569,2.99800146432876,1.50722640552623,3.41007250693544,3.01599819191221,0.494389935468748,4.19338135067744,0,1.45590164952668,1.54589062922275,1.45462575940567,0,3.80615036115011,5.65506108396329,1.53274233125155,0.479260498023681,0,0.254140454146129,4.04434726393021,1.37250180845588,6.78533501409468,3.82413504423008,2.55715457330331,4.98691306942944,3.24482526135515,3.46253837091075,1.61729061793121,1.26361379216837,0.420883711772948,1.17108398666433,1.60931473103431,1.62055916824814,1.9591626318643,2.58538696775046,3.84341160854549,1.96773621575431,2.84573707812917,0.431135985865684,2.26927296201383,1.40760899331159,1.97276159184817,2.22437799380478,2.78601733217733,3.49829631893504,1.59227413454795,0,0.257347907114715,0.284163499395593,2.48550927042602,1.17263029990548,1.98068267607116,2.13070262026689,1.96764231747404,3.23960937063494,3.25547522650571,1.3413670069981,1.86824547787471,2.96207729844265,2.46251196118643,2.99954595319666,2.77779976108131,3.29325172936576,2.54992195644706,5.04695876553905,3.2929475961371,1.98251269790279,0.264450566663544,1.06644125267617,1.85789337488351,1.15980715189884,1.21010114774006,0.889512175379481,1.52180500890047,2.37264530772256,0.988193728344065,0.754005626400808,1.1937388322469,2.14460495831032,0,0.864552199498777,1.1948476395262,2.46568271239006,3.54170389090159,2.25415471346161,3.25842124552503,3.10323979468201,3.43665517462561,3.60448261608267,2.36176236767363,3.29697328466887,2.59134044235781,0,0.333690211432188,0.196558995113203,0.674586337154561,0,0.241177159752417,0.25462585178142,0.575392274901621,0.486405680325106,0.274561413188081,1.43768206527355,1.11642284300551,0.312037673114561,0.505157755894224,0.538192240565737,0.482443521363367,2.40179147216586,2.08440552947533,1.62964976442026,2.37643120085263,2.11221223459652,3.01511263395268,3.33261097240419,1.75620283072019,3.62560831444239,1.99318220683897,3.6674596791222,3.27726629431476,3.10832967358612,2.16973587872267,1.50791283939272,0,1.47529281905711,1.37968373152366,2.40825884981688,2.34423373184406,1.3114795630134,1.51482556322624,0.631016438832513,0.390438744296638,1.93881057959519,0.238968797952552,0.668396022247182,1.13230612315533,2.02405350837447,0.876767573733936,1.18586333383957,4.81981974632711,1.41940085208269,1.95872164033981,2.60619134965722,3.62934270539578,7.96470830039777,0.485561272309963,1.209294227859,1.32023555829129,1.77181135728464,2.45948118355142,1.29214146584111,1.45413491791002,4.27796854061666,2.21225730555071,2.10837217149998,3.09406629744561,3.40439605753788,2.34079422240703,1.16422815404479,2.14337035031592,2.48276327099183,2.49716344642899,2.96188237083818,1.522324745573,0.23467170806371,1.27099242518292,1.7642271844397,6.43056386471772,1.29171541356724,1.26657142349127,1.90995750405018,0.656563598980245,2.04036585640896,3.33765543618917,0.341741761595705,2.88941615148511,1.48155621895769,0.18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| ||
|EntrezGene=18514 | |||
|HGNC= | |||
|UniProt=P41778 | |||
|association_with_transcript=-22bp_to_ENSMUST00000072863_5end | |||
|description=CAGE_peak_8_at_Pbx1_5end | |||
|id=chr1:170362322..170362333,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!2.57e-08!50;UBERON:0006238!2.57e-08!50;UBERON:0000033!2.62e-08!63;UBERON:0002346!7.06e-08!71;UBERON:0003075!7.06e-08!71;UBERON:0007284!7.06e-08!71;UBERON:0002616!7.65e-08!49;UBERON:0004121!4.23e-07!102;UBERON:0000924!4.23e-07!102;UBERON:0006601!4.23e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.58e-10,92;UBERON:0000073,4.46e-07,54 | |||
|phase1_expression=2.5623815536767,0.348975407639361,0.454999239389536,0.90739263392049,0,1.6787927191189,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,1.11994695955385,0.68822784320151,0,0.86152399231815,0.215471232685889,1.52018735565099,1.26015064879965,0.443461021310609,0,0,0,1.44425809875637,0.997407872150954,1.83752420636132,5.4409111995798,0.7813353445238,7.32933241563318,9.99993529652724,8.87959130445979,6.311634589405,4.15459499319405,2.93993100536592,2.75320128242522,4.69434806608824,0.436050312760893,1.31811709640683,1.1665793944457,1.25987779462826,1.43752564364972,0,0,0,0.771778308107841,2.0057340795713,3.6097046459421,2.83243045203437,5.28990979272033,4.43681982454325,1.0165335962074,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,1.8664130215526,3.64516033495565,2.3135745748652,2.85650984403804,0.883474163806454,3.79721477566358,2.87536413054709,6.43453150627015,4.40463523997555,4.72443150915195,3.84016333140609,2.1101806036831,2.10421580285542,2.6045668527838,0.837548997004143,2.8138130501584,2.59757021220577,1.76777151284201,1.85083185038834,1.3047961207771,0.151452386666368,0.377857800533928,3.47837386442013,0,0,0,0,0,1.82577746171277,1.1930122580464,0.519572009205738,0.35333957451034,2.11265129665021,1.28326477414318,0,0,1.29894624606728,0.253359865475099,0.505524445014783,1.37020655662872,0.258937883647172,3.26572705942614,2.60227990149204,3.65358573974569,2.99800146432876,1.50722640552623,3.41007250693544,3.01599819191221,0.494389935468748,4.19338135067744,0,1.45590164952668,1.54589062922275,1.45462575940567,0,3.80615036115011,5.65506108396329,1.53274233125155,0.479260498023681,0,0.254140454146129,4.04434726393021,1.37250180845588,6.78533501409468,3.82413504423008,2.55715457330331,4.98691306942944,3.24482526135515,3.46253837091075,1.61729061793121,1.26361379216837,0.420883711772948,1.17108398666433,1.60931473103431,1.62055916824814,1.9591626318643,2.58538696775046,3.84341160854549,1.96773621575431,2.84573707812917,0.431135985865684,2.26927296201383,1.40760899331159,1.97276159184817,2.22437799380478,2.78601733217733,3.49829631893504,1.59227413454795,0,0.257347907114715,0.284163499395593,2.48550927042602,1.17263029990548,1.98068267607116,2.13070262026689,1.96764231747404,3.23960937063494,3.25547522650571,1.3413670069981,1.86824547787471,2.96207729844265,2.46251196118643,2.99954595319666,2.77779976108131,3.29325172936576,2.54992195644706,5.04695876553905,3.2929475961371,1.98251269790279,0.264450566663544,1.06644125267617,1.85789337488351,1.15980715189884,1.21010114774006,0.889512175379481,1.52180500890047,2.37264530772256,0.988193728344065,0.754005626400808,1.1937388322469,2.14460495831032,0,0.864552199498777,1.1948476395262,2.46568271239006,3.54170389090159,2.25415471346161,3.25842124552503,3.10323979468201,3.43665517462561,3.60448261608267,2.36176236767363,3.29697328466887,2.59134044235781,0,0.333690211432188,0.196558995113203,0.674586337154561,0,0.241177159752417,0.25462585178142,0.575392274901621,0.486405680325106,0.274561413188081,1.43768206527355,1.11642284300551,0.312037673114561,0.505157755894224,0.538192240565737,0.482443521363367,2.40179147216586,2.08440552947533,1.62964976442026,2.37643120085263,2.11221223459652,3.01511263395268,3.33261097240419,1.75620283072019,3.62560831444239,1.99318220683897,3.6674596791222,3.27726629431476,3.10832967358612,2.16973587872267,1.50791283939272,0,1.47529281905711,1.37968373152366,2.40825884981688,2.34423373184406,1.3114795630134,1.51482556322624,0.631016438832513,0.390438744296638,1.93881057959519,0.238968797952552,0.668396022247182,1.13230612315533,2.02405350837447,0.876767573733936,1.18586333383957,4.81981974632711,1.41940085208269,1.95872164033981,2.60619134965722,3.62934270539578,7.96470830039777,0.485561272309963,1.209294227859,1.32023555829129,1.77181135728464,2.45948118355142,1.29214146584111,1.45413491791002,4.27796854061666,2.21225730555071,2.10837217149998,3.09406629744561,3.40439605753788,2.34079422240703,1.16422815404479,2.14337035031592,2.48276327099183,2.49716344642899,2.96188237083818,1.522324745573,0.23467170806371,1.27099242518292,1.7642271844397,6.43056386471772,1.29171541356724,1.26657142349127,1.90995750405018,0.656563598980245,2.04036585640896,3.33765543618917,0.341741761595705,2.88941615148511,1.48155621895769,0.188368457004691,0.27338845544205,0.228778173206523,0.509935289981566,0.69975726161829,1.38199973804424,0,1.10717597753397,1.21991680276109,2.48412283890143,2.71814784818809,1.52853794622324,1.48350781023303,3.14083131756277,0.523511883968059,2.46268449254406,0,0,2.24274819065968,2.64733584731356,1.36115831840833,2.58319646955462,3.21016638432478,4.92900402312167,2.8644964665669,2.41176492179135,0.483168241652012,0.576060012515731,0,0.608175645870493,1.74608627180206,0.25984164595559,0.895133478337407,0,0.360586348559907,0.443068581523732,0.706765149637033,0.15241361331,0.201652370273681,0.682205165178267,0.481059208201647,0.233753804363138,2.72076460338254,0,0,0,1.54551675225752,1.87682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| |||
|short_description=p8@Pbx1 | |||
}} | |||
Revision as of 19:36, 13 September 2013
| Short description: | p8@Pbx1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_8_at_Pbx1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -22bp_to_ENSMUST00000072863_5end |
| EntrezGene: | Pbx1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| structure with developmental contribution from neural crest | 3.58e-10 | 92 |
| regional part of nervous system | 4.46e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
