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FFCP PHASE1:Mm9::chr1:129999889..129999937,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=226412|HGNC=|MCL_coexpression_id=1107|UniProt=Q3URW7|association_with_transcript=0bp_to_ENSMUST00000170793_5end|description=CAGE_peak_1_at_R3hdm1_5end|id=chr1:129999889..129999937,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!2.00e-11!94;UBERON:0007811!9.03e-11!86;UBERON:0000033!1.21e-08!63;UBERON:0000955!4.44e-08!50;UBERON:0006238!4.44e-08!50;UBERON:0003056!5.27e-08!49;UBERON:0002021!5.49e-08!10;UBERON:0000411!5.49e-08!10;UBERON:0001950!5.49e-08!10;UBERON:0001017!8.69e-08!73;UBERON:0005743!8.69e-08!73;UBERON:0002616!1.42e-07!49;UBERON:0000073!3.91e-07!75;UBERON:0001016!3.91e-07!75;UBERON:0002020!4.73e-07!34;UBERON:0001049!7.13e-07!52;UBERON:0005068!7.13e-07!52;UBERON:0006241!7.13e-07!52;UBERON:0007135!7.13e-07!52;UBERON:0002791!7.83e-07!29;UBERON:0003528!7.83e-07!29;UBERON:0001893!7.83e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.13e-08,64;UBERON:0003075,1.13e-08,64;UBERON:0007284,1.13e-08,64;UBERON:0003056,5.27e-08,49;UBERON:0002021,5.49e-08,10;UBERON:0000411,5.49e-08,10;UBERON:0001950,5.49e-08,10;UBERON:0004121,6.03e-08,95;UBERON:0000924,6.03e-08,95;UBERON:0006601,6.03e-08,95;UBERON:0000073,6.37e-08,54;UBERON:0001017,8.69e-08,73;UBERON:0010371,2.54e-07,73;UBERON:0001016,3.91e-07,75;UBERON:0002020,4.73e-07,34;UBERON:0000955,5.52e-07,47;UBERON:0006238,5.52e-07,47;UBERON:0001049,7.13e-07,52;UBERON:0005068,7.13e-07,52;UBERON:0006241,7.13e-07,52;UBERON:0007135,7.13e-07,52;UBERON:0003528,7.83e-07,29;UBERON:0002791,7.83e-07,29;UBERON:0001893,7.83e-07,29|phase1_expression=16.4953312517938,11.1672130444596,10.4649825059593,15.4256747766483,19.5349334679075,16.4521686473652,18.9226238882376,30.7313509790952,29.143265485395,33.4712272640451,34.0723756768755,32.9459016650739,38.5201642345213,34.268797748247,39.3069518942482,41.5074298149143,53.8662646158673,33.2812584452941,38.3920414096069,33.5267824920444,44.4776407490095,27.1064296778417,29.2543763835608,13.5993559374396,14.9116032693661,8.6134794617253,9.04600191934057,14.2211013572687,10.2612646506442,10.837295579677,10.199603490144,13.9706748161119,12.3012957516914,15.8481681015439,9.53210345179206,13.1325369833209,9.59595974433135,9.20769587621197,10.1573594788094,13.088093599345,12.3528612486513,13.6609096991689,13.5942898848723,19.3881099682389,20.5795170375615,24.778811541827,14.0830441982647,10.9012578190223,12.3024262331304,16.7209713203884,13.2987100544094,14.3752564364972,31.0397821206812,49.3246256567714,48.7336008756573,13.6347501099052,16.3324060765091,16.5015069528782,50.1744822931802,38.0873505075864,38.6637156138769,7.45457970552091,16.8966011261116,16.1981949110652,22.7439263390404,13.4991221839759,10.1864037576258,14.6002956022191,42.7201202710928,32.2664192612741,35.1242685456808,29.4220513935918,23.6329338818226,34.664896177832,30.3830143127809,32.1726575313507,44.0463523997555,48.265813796201,44.8531077108231,38.774568592677,30.0994347451928,39.068502791757,27.3599339021353,29.826418331679,37.7411672008721,42.1318877227345,47.9792564292977,39.5166825149637,17.4927506599655,25.8454735565206,40.5810284182349,14.6272059086836,8.83962733820076,11.3337670243942,29.2399387851451,41.6665005000522,23.5946625821343,42.7780109670925,25.718814455684,22.2603931941514,19.1547050896285,28.2318250311499,15.2883143823987,14.2213340630666,10.1750789275271,10.6411143499541,9.60496445528088,23.7502469815645,112.120103619225,30.8759649254836,19.9508125781056,14.0054120023585,20.0635482612771,24.1156224884196,28.3388784197049,19.729654838759,28.9218112249217,45.4041980728523,34.4998115260451,36.3975412381671,39.9723148413312,44.6085232884404,16.775258509631,65.290117733575,48.1727425670947,22.9911349687732,23.9630249011841,10.1983464268879,21.601938602421,48.5321671671626,57.6450759551469,47.7486538028885,86.738335775946,95.893296498874,42.8043371792694,66.1944353316451,25.76535905413,34.4607308589958,26.0304441186685,39.1421851948842,34.3517969421538,25.749035696549,35.4722395716538,39.1832526372859,42.5908484687312,44.9679158199823,37.4806898238915,46.0491999915448,37.2932627773817,43.6835045187662,35.0142737086258,24.769117764316,32.2534809101694,30.6461906539507,31.4846668704153,30.4522428232295,18.2575428701441,16.7276139624565,21.3122624546694,25.6835957944022,34.7098568772022,28.0896815879183,32.4340287751738,36.9916755685119,31.6247581419125,33.0198201545579,33.5341751749524,34.2122453135807,28.9625335847726,31.027650710949,39.31837262974,32.4563972084238,37.3235195994786,35.1620817152174,66.2413337977001,40.3386080526795,29.7376904685418,21.4204958997471,29.2204903233271,34.3710274353449,30.9281907173024,30.050845168878,19.1245117706588,22.0661726290569,16.1339880925134,16.4698954724011,17.3421294072186,19.4977342600328,25.3453313254856,31.4586793028978,24.2074615859658,25.490082976559,21.4324728076982,30.5043528667976,32.6852433451933,35.63898237293,31.614255408323,28.5452786953597,30.353537819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|EntrezGene=226412
|HGNC=
|MCL_coexpression_id=1107
|UniProt=Q3URW7
|association_with_transcript=0bp_to_ENSMUST00000170793_5end
|description=CAGE_peak_1_at_R3hdm1_5end
|id=chr1:129999889..129999937,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!2.00e-11!94;UBERON:0007811!9.03e-11!86;UBERON:0000033!1.21e-08!63;UBERON:0000955!4.44e-08!50;UBERON:0006238!4.44e-08!50;UBERON:0003056!5.27e-08!49;UBERON:0002021!5.49e-08!10;UBERON:0000411!5.49e-08!10;UBERON:0001950!5.49e-08!10;UBERON:0001017!8.69e-08!73;UBERON:0005743!8.69e-08!73;UBERON:0002616!1.42e-07!49;UBERON:0000073!3.91e-07!75;UBERON:0001016!3.91e-07!75;UBERON:0002020!4.73e-07!34;UBERON:0001049!7.13e-07!52;UBERON:0005068!7.13e-07!52;UBERON:0006241!7.13e-07!52;UBERON:0007135!7.13e-07!52;UBERON:0002791!7.83e-07!29;UBERON:0003528!7.83e-07!29;UBERON:0001893!7.83e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.13e-08,64;UBERON:0003075,1.13e-08,64;UBERON:0007284,1.13e-08,64;UBERON:0003056,5.27e-08,49;UBERON:0002021,5.49e-08,10;UBERON:0000411,5.49e-08,10;UBERON:0001950,5.49e-08,10;UBERON:0004121,6.03e-08,95;UBERON:0000924,6.03e-08,95;UBERON:0006601,6.03e-08,95;UBERON:0000073,6.37e-08,54;UBERON:0001017,8.69e-08,73;UBERON:0010371,2.54e-07,73;UBERON:0001016,3.91e-07,75;UBERON:0002020,4.73e-07,34;UBERON:0000955,5.52e-07,47;UBERON:0006238,5.52e-07,47;UBERON:0001049,7.13e-07,52;UBERON:0005068,7.13e-07,52;UBERON:0006241,7.13e-07,52;UBERON:0007135,7.13e-07,52;UBERON:0003528,7.83e-07,29;UBERON:0002791,7.83e-07,29;UBERON:0001893,7.83e-07,29
|phase1_expression=16.4953312517938,11.1672130444596,10.4649825059593,15.4256747766483,19.5349334679075,16.4521686473652,18.9226238882376,30.7313509790952,29.143265485395,33.4712272640451,34.0723756768755,32.9459016650739,38.5201642345213,34.268797748247,39.3069518942482,41.5074298149143,53.8662646158673,33.2812584452941,38.3920414096069,33.5267824920444,44.4776407490095,27.1064296778417,29.2543763835608,13.5993559374396,14.9116032693661,8.6134794617253,9.04600191934057,14.2211013572687,10.2612646506442,10.837295579677,10.199603490144,13.9706748161119,12.3012957516914,15.8481681015439,9.53210345179206,13.1325369833209,9.59595974433135,9.20769587621197,10.1573594788094,13.088093599345,12.3528612486513,13.6609096991689,13.5942898848723,19.3881099682389,20.5795170375615,24.778811541827,14.0830441982647,10.9012578190223,12.3024262331304,16.7209713203884,13.2987100544094,14.3752564364972,31.0397821206812,49.3246256567714,48.7336008756573,13.6347501099052,16.3324060765091,16.5015069528782,50.1744822931802,38.0873505075864,38.6637156138769,7.45457970552091,16.8966011261116,16.1981949110652,22.7439263390404,13.4991221839759,10.1864037576258,14.6002956022191,42.7201202710928,32.2664192612741,35.1242685456808,29.4220513935918,23.6329338818226,34.664896177832,30.3830143127809,32.1726575313507,44.0463523997555,48.265813796201,44.8531077108231,38.774568592677,30.0994347451928,39.068502791757,27.3599339021353,29.826418331679,37.7411672008721,42.1318877227345,47.9792564292977,39.5166825149637,17.4927506599655,25.8454735565206,40.5810284182349,14.6272059086836,8.83962733820076,11.3337670243942,29.2399387851451,41.6665005000522,23.5946625821343,42.7780109670925,25.718814455684,22.2603931941514,19.1547050896285,28.2318250311499,15.2883143823987,14.2213340630666,10.1750789275271,10.6411143499541,9.60496445528088,23.7502469815645,112.120103619225,30.8759649254836,19.9508125781056,14.0054120023585,20.0635482612771,24.1156224884196,28.3388784197049,19.729654838759,28.9218112249217,45.4041980728523,34.4998115260451,36.3975412381671,39.9723148413312,44.6085232884404,16.775258509631,65.290117733575,48.1727425670947,22.9911349687732,23.9630249011841,10.1983464268879,21.601938602421,48.5321671671626,57.6450759551469,47.7486538028885,86.738335775946,95.893296498874,42.8043371792694,66.1944353316451,25.76535905413,34.4607308589958,26.0304441186685,39.1421851948842,34.3517969421538,25.749035696549,35.4722395716538,39.1832526372859,42.5908484687312,44.9679158199823,37.4806898238915,46.0491999915448,37.2932627773817,43.6835045187662,35.0142737086258,24.769117764316,32.2534809101694,30.6461906539507,31.4846668704153,30.4522428232295,18.2575428701441,16.7276139624565,21.3122624546694,25.6835957944022,34.7098568772022,28.0896815879183,32.4340287751738,36.9916755685119,31.6247581419125,33.0198201545579,33.5341751749524,34.2122453135807,28.9625335847726,31.027650710949,39.31837262974,32.4563972084238,37.3235195994786,35.1620817152174,66.2413337977001,40.3386080526795,29.7376904685418,21.4204958997471,29.2204903233271,34.3710274353449,30.9281907173024,30.050845168878,19.1245117706588,22.0661726290569,16.1339880925134,16.4698954724011,17.3421294072186,19.4977342600328,25.3453313254856,31.4586793028978,24.2074615859658,25.490082976559,21.4324728076982,30.5043528667976,32.6852433451933,35.63898237293,31.614255408323,28.5452786953597,30.3535378196435,33.9503340353085,29.6727595620198,24.5560356204383,21.937494404449,41.0438960061591,41.8670659591122,38.45142121781,41.5863248846431,42.4471801164254,32.8467348798032,41.1405476554659,26.2659067375557,21.6903516418584,23.0029130443767,19.7234702264307,18.4102227137591,26.0156244285525,18.8367284198008,30.3939418458921,21.985629629826,22.3599865889172,27.8670109715864,28.3474293244564,28.6322102911973,29.983620082085,27.3750187018916,26.9284434043762,33.1033802623001,27.0186921371505,28.5424035896902,15.8947415274266,22.7944176062982,25.6028833689276,34.6819953060326,16.86107619838,29.5058563811422,37.8033342437484,34.8394780273509,40.5552435609023,32.4591191845817,45.1922959695828,33.4438712581232,35.9203644752907,39.637905182835,32.2607877235945,41.8861507274901,46.1414745185797,34.0040989406911,37.1164939547366,36.7617633490267,110.21321153268,46.2724677778956,22.2582004584069,30.1340874804116,31.1793532418092,45.1333470355874,21.1219153454834,23.5812374432506,31.3084432394791,21.8523400731772,34.7401717176638,28.6855405416725,32.7180356529755,36.3627325952416,45.1932563848217,27.4088382294997,37.1287955693473,47.6615448055303,31.8708136435419,15.1349660025823,26.792129378949,38.3054904667311,29.9659613571479,30.4415688113924,19.1812917942198,26.2832313031356,20.3358788029267,34.1819016985191,35.6154306353597,36.9753537133624,31.0008434130721,24.471330520643,22.9797259643086,20.4036585640896,33.9328302679233,36.9081102523362,24.7664241555867,30.7422915433721,46.5270088801587,60.8289313358562,43.0102965628263,26.5166350790414,28.6900477263499,27.5017947870803,11.4560474161814,28.6284074190927,34.3609899444374,31.7535702016096,26.763301889852,24.4566071395719,27.7820553552731,25.1266505405021,19.6316956488022,26.1822246049422,39.1443767244763,99.2099572084175,36.6315537807748,26.3078999826785,26.8342639914786,20.7947315799147,33.2843567216833,29.9260958546673,32.0302786716117,46.3478302361642,56.5306842732854,73.1596215894978,50.2457681798803,16.6234676537935,27.5265365201737,35.2085430269824,37.7746327858386,46.6901183735973,36.6596121035905,45.3406848425952,48.0600301753183,42.6758117267999,48.5982212359571,48.1441930854377,49.356674761489,49.9064372315299,31.7422537061296,19.7567498502918,25.2993075638721,19.4746154982331,23.9555096599916,25.3371341859096,26.7401371430207,28.5109944175158,32.1006146582633,94.3135577170501,94.3666734839713,103.694087932531,91.4258930068418,89.0607275701835,118.596841890183,96.5282175331482,99.0706647093285,94.7067634776988,98.8922195445976,34.7687614406992,35.9122386060928,30.7320490357442,36.9522209943807,30.3939085810574,25.738091183002,35.3372297204568,33.7897493871787,36.2638706838751,39.6734622469162,32.6988296858409,35.4617521805823,39.5167161522904,41.8084245203796,43.0191662477543,43.8190195980428,41.718357340148,42.2471192815514,39.1481605763141,35.7693375926586,32.9154482289999,34.6077822010708,38.1497903915714,35.3191792416558,40.8434711002535,35.1150622750457,42.2563617336105,41.0388749843035,42.0992752922172,28.0571135828869,36.4209505641215,40.5838467387321,31.1015592808964,43.6921892144424,39.3529486401528,28.9780270408017,31.1129039232393,35.0239818098726,36.7273597572179,30.0004330002541,28.7516116169323
|short_description=p1@R3hdm1
}}

Revision as of 18:42, 13 September 2013

Short description:p1@R3hdm1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_R3hdm1_5end
Coexpression cluster:MCL_coexpression_mm9:1107
Association with transcript: 0bp_to_ENSMUST00000170793_5end
EntrezGene:R3hdm1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@R3hdm1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.50
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I511.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I315.43
CD326+ enterocyte, pool2.CNhs13197.11849-124I419.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I716.45
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I818.92
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E930.73
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E729.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F233.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E634.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F132.95
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E438.52
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E834.27
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A139.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A341.51
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A553.87
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A233.28
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A438.39
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A633.53
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A344.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H227.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I929.25
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D113.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D214.91
GP2+ M cell, pool1.CNhs13228.11845-124H98.61
GP2+ M cell, pool2.CNhs13231.11846-124I19.05
GP2+ M cell, pool3.CNhs13240.11847-124I214.22
Ileum epithelium, pool1.CNhs13199.10252-104B910.26
Ileum epithelium, pool2.CNhs13232.10253-104C110.84
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.53
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.13
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G89.21
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H313.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H213.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H413.59
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D819.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.58
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B324.78
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.90
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C316.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A231.04
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I949.32
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A148.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.33
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C516.50
Mouse Granule cells, donor1.CNhs12131.11713-123C350.17
Mouse Granule cells, donor2.CNhs12357.11731-123E338.09
Mouse Granule cells, donor3.CNhs12108.11636-122C738.66
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C716.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E722.74
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D213.50
Mouse Microglia, donor1.CNhs12629.11718-123C810.19
Mouse Microglia, donor2.CNhs12634.11736-123E814.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D542.72
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F532.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D935.12
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F129.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D523.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D234.66
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F230.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D632.17
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D344.05
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F348.27
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D744.85
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D438.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F430.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D839.07
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E427.36
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E529.83
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I637.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D642.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F647.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E139.52
Mouse Schwann, donor1.CNhs12507.11728-123D917.49
Mouse Schwann, donor2.CNhs12573.11746-123F925.85
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G340.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F714.63
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C811.33
Mouse hepatocyte, donor6.CNhs13090.11822-124F429.24
Mouse hepatocyte, donor8.CNhs13091.11824-124F641.67
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A723.59
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I742.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E325.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I822.26
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.15
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H128.23
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G110.18
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.64
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.60
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B623.75
accessory axillary lymph node, adult.CNhs10475.1063-29H9112.12
adrenal gland, adult.CNhs10508.49-24D730.88
adrenal gland, embryo E14.CNhs11038.406-44C519.95
adrenal gland, embryo E16.CNhs11004.1254-43D614.01
adrenal gland, embryo E17.CNhs11043.1263-45I120.06
adrenal gland, embryo E18.CNhs11026.1262-18F524.12
adrenal gland, neonate N00.CNhs11191.1311-23C128.34
adrenal gland, neonate N25.CNhs11223.1377-27I319.73
amnion, adult pregnant day17.5.CNhs10488.583-22A828.92
aorta, adult.CNhs10498.46-23H145.40
bone (os femoris), adult.CNhs10483.56-12G234.50
bone (os femoris), neonate N02.CNhs11227.1985-43F536.40
bone (os femoris), neonate N16.CNhs11225.1525-43A639.97
bone (os femoris), neonate N20.CNhs11195.1350-25C344.61
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B265.29
cerebellum, neonate N30.CNhs11135.1395-42I248.17
colon, adult.CNhs10468.36-18H722.99
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C723.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D421.60
corpora quadrigemina, adult.CNhs10501.16-22A448.53
corpus striatum, adult.CNhs10487.19-21D857.65
corpus striatum, neonate N00.CNhs11226.630-43F147.75
cortex, adult.CNhs10473.12-14D586.74
cortex, neonate N30.CNhs11107.1392-42F295.89
diencephalon, adult.CNhs10482.20-12F242.80
diencephalon, neonate N30.CNhs11201.1388-42B266.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B125.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A234.46
epididymis, adult.CNhs10490.58-23B226.03
eyeball, adult.CNhs10484.31-12G439.14
eyeball, embryo E12.CNhs11016.345-16C634.35
eyeball, embryo E14.CNhs10521.399-16E225.75
eyeball, embryo E15.CNhs10593.426-16C935.47
eyeball, embryo E17.CNhs11023.1261-18D439.18
eyeball, neonate N00.CNhs11207.633-15C642.59
eyeball, neonate N01.CNhs11140.1532-43E744.97
eyeball, neonate N02.CNhs11205.1551-44G837.48
eyeball, neonate N16.CNhs11188.777-19A246.05
forelimb, embryo E11.CNhs10596.335-25E237.29
forelimb, embryo E12.CNhs10600.359-14H243.68
forelimb, embryo E13.CNhs10589.384-1E235.01
forelimb, embryo E14.CNhs10577.413-26A824.77
forelimb, embryo E15.CNhs11007.437-20E732.25
forelimb, embryo E17.CNhs10598.1517-43C430.65
forelimb, embryo E18.CNhs11008.1520-43B531.48
gonad, embryo E13.CNhs11044.1564-45I630.45
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.26
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D216.73
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D521.31
heart, embryo E11.CNhs10586.331-24E925.68
heart, embryo E12.CNhs11015.353-12F534.71
heart, embryo E13.CNhs11013.376-3I928.09
heart, embryo E14.CNhs10597.403-26D432.43
heart, embryo E15.CNhs11017.431-16C836.99
heart, embryo E16.CNhs11021.457-17C631.62
heart, embryo E17.CNhs11025.479-18E533.02
heart, embryo E18.CNhs11030.1283-20G333.53
heart, neonate N00.CNhs11213.639-21E334.21
heart, neonate N03.CNhs11221.1349-25I228.96
heart, neonate N10.CNhs11118.749-24G131.03
heart, neonate N16.CNhs11209.782-15G139.32
heart, neonate N20.CNhs11127.821-26I632.46
heart, neonate N25.CNhs11196.1351-25D337.32
heart, neonate N30.CNhs11202.1390-42D235.16
hippocampus, adult.CNhs10478.13-16E866.24
hippocampus, neonate N00.CNhs11228.627-43G140.34
intestinal mucosa, adult.CNhs10506.860-29I329.74
intestine, adult.CNhs10496.178-9A321.42
intestine, embryo E12.CNhs11019.1251-16I529.22
intestine, embryo E13.CNhs11010.381-16D534.37
intestine, embryo E15.CNhs10602.976-16D830.93
intestine, embryo E16.CNhs10585.463-22H430.05
intestine, embryo E17.CNhs10582.482-18D319.12
intestine, embryo E18.CNhs10526.1289-20F722.07
intestine, neonate N00.CNhs11126.644-26D116.13
intestine, neonate N01.CNhs11192.1322-23E916.47
intestine, neonate N06.CNhs11102.688-20B817.34
intestine, neonate N07.CNhs11095.720-20F219.50
intestine, neonate N10.CNhs11098.755-23A525.35
intestine, neonate N20.CNhs11187.827-18D131.46
intestine, neonate N25.CNhs11121.1352-25E324.21
intestine, neonate N30.CNhs11131.1384-42G125.49
kidney, embryo E14.CNhs10606.411-4I921.43
kidney, embryo E15.CNhs10997.434-16F830.50
kidney, embryo E16.CNhs10584.464-22A532.69
kidney, embryo E17.CNhs11028.483-18I235.64
kidney, embryo E18.CNhs11001.1288-20C731.61
kidney, neonate N00.CNhs11214.646-21G728.55
kidney, neonate N10.CNhs11206.758-6D530.35
kidney, neonate N20.CNhs11113.832-19I133.95
kidney, neonate N25.CNhs11122.1353-25F329.67
kidney, neonate N30.CNhs11203.1385-42H124.56
liver, adult pregnant day01.CNhs10466.508-5B221.94
liver, embryo E12.CNhs10601.355-15F841.04
liver, embryo E13.CNhs10524.378-3H641.87
liver, embryo E14.CNhs10594.409-16E138.45
liver, embryo E15.CNhs10520.433-16D741.59
liver, embryo E16.CNhs10523.462-17F542.45
liver, embryo E17.CNhs10510.481-18A332.85
liver, embryo E18.CNhs10579.499-43G441.14
liver, neonate N00.CNhs11117.641-24F426.27
liver, neonate N03.CNhs11123.1345-25G221.69
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H219.72
liver, neonate N10.CNhs11115.751-24B918.41
liver, neonate N20.CNhs11220.823-25A326.02
liver, neonate N25.CNhs11198.1368-26H118.84
liver, neonate N30.CNhs11106.1382-42D130.39
lung, adult.CNhs10474.28-22B121.99
lung, embryo E12.CNhs10522.354-16G222.36
lung, embryo E14.CNhs10604.404-26F827.87
lung, embryo E15.CNhs11020.432-17C528.35
lung, embryo E16.CNhs10998.458-17B628.63
lung, embryo E17.CNhs10605.480-44A629.98
lung, embryo E18.CNhs10583.1287-20I627.38
lung, neonate N00.CNhs11224.640-42C626.93
lung, neonate N06.CNhs11212.683-20E533.10
lung, neonate N07.CNhs11111.715-19A327.02
lung, neonate N10.CNhs11219.750-23E628.54
lung, neonate N20.CNhs11109.822-18A415.89
lung, neonate N25.CNhs11119.1359-25C722.79
lung, neonate N30.CNhs11133.1394-42H225.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A134.68
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A116.86
mammary gland, adult lactating day02.CNhs10480.595-22B629.51
mammary gland, adult pregnant day19.CNhs10476.588-5H237.80
medulla oblongata, adult.CNhs10477.17-12C234.84
medulla oblongata, neonate N30.CNhs11200.1396-42A340.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C732.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C245.19
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E133.44
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E235.92
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E339.64
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D732.26
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D841.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D946.14
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D434.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D537.12
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D636.76
olfactory brain, adult.CNhs10489.18-22I9110.21
ovary, adult.CNhs10507.91-2I746.27
ovary, embryo E18.CNhs11040.505-44H722.26
ovary, neonate N00.CNhs11217.1299-22I430.13
oviduct, adult pregnant day01.CNhs10500.988-6G631.18
pancreas, adult.CNhs10486.34-16E445.13
pancreas, embryo E14.CNhs11012.405-44F421.12
pancreas, embryo E15.CNhs11042.1556-45F223.58
pancreas, embryo E16.CNhs11003.460-26E531.31
pancreas, embryo E17.CNhs10599.1558-45G321.85
pancreas, embryo E18.CNhs10580.1535-43I734.74
pancreas, neonate N00.CNhs11105.645-26G928.69
pancreas, neonate N01.CNhs11138.1531-43D732.72
pancreas, neonate N02.CNhs11139.1539-43D836.36
pancreas, neonate N16.CNhs11136.787-43B645.19
pancreas, neonate N25.CNhs11094.1555-45E227.41
pancreas, neonate N30.CNhs11182.1548-44H537.13
pituitary gland, adult.CNhs10493.21-1G847.66
pituitary gland, embryo E12.CNhs11018.346-16E631.87
pituitary gland, embryo E13.CNhs11009.370-44C715.13
pituitary gland, embryo E14.CNhs11037.398-44A526.79
pituitary gland, embryo E15.CNhs10592.427-16B938.31
pituitary gland, embryo E16.CNhs11036.449-43F629.97
pituitary gland, embryo E17.CNhs11039.1265-44F530.44
pituitary gland, neonate N00.CNhs11190.1308-22E919.18
placenta, adult pregnant day10.CNhs10472.539-13I726.28
placenta, adult pregnant day17.CNhs10464.577-18G320.34
prostate, adult.CNhs10470.859-1F834.18
skin, adult.CNhs10492.30-1C335.62
skin, neonate N00.CNhs11124.650-25G436.98
skin, neonate N03.CNhs11215.662-22H331.00
skin, neonate N06.CNhs11097.693-20I524.47
skin, neonate N10.CNhs11108.762-6C422.98
small intestine, neonate N16.CNhs11114.790-21I120.40
spinal cord, adult.CNhs10505.24-13C933.93
spleen, adult.CNhs10465.25-2G236.91
spleen, embryo E16.CNhs11035.461-43C124.77
spleen, embryo E18.CNhs11011.1271-21F230.74
spleen, neonate N10.CNhs11116.752-24D146.53
spleen, neonate N20.CNhs11112.824-19H160.83
spleen, neonate N25.CNhs11099.1354-25G343.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C626.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C928.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D327.50
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E328.63
stomach, embryo E15.CNhs10603.1252-16G834.36
stomach, embryo E16.CNhs11022.459-17D431.75
stomach, embryo E17.CNhs11006.1035-18D526.76
stomach, embryo E18.CNhs10999.1286-20C624.46
stomach, neonate N03.CNhs11193.1340-24B827.78
stomach, neonate N07.CNhs11210.718-18A925.13
stomach, neonate N25.CNhs11104.1355-25E419.63
stomach, neonate N30.CNhs11134.1386-42I126.18
submandibular gland, adult.CNhs10469.59-29C139.14
testis, adult.CNhs10504.57-7G599.21
testis, embryo E13.CNhs11031.389-23F536.63
testis, embryo E15.CNhs11034.443-27C526.31
testis, embryo E16.CNhs11033.470-26G526.83
testis, embryo E17.CNhs11029.486-18I520.79
testis, embryo E18.CNhs11027.503-18G533.28
testis, neonate N00.CNhs11189.1300-22B729.93
testis, neonate N07.CNhs11222.726-26I432.03
testis, neonate N10.CNhs11204.763-44D946.35
testis, neonate N20.CNhs11110.839-18H356.53
testis, neonate N30.CNhs11130.1391-42E273.16
thymus, adult.CNhs10471.38-12B550.25
thymus, embryo E14.CNhs11041.402-44I416.62
thymus, embryo E15.CNhs11005.430-45I227.53
thymus, embryo E16.CNhs11002.456-26C535.21
thymus, embryo E17.CNhs10581.478-18C137.77
thymus, embryo E18.CNhs10595.1273-19G446.69
thymus, neonate N02.CNhs11181.1541-43F836.66
thymus, neonate N03.CNhs11137.2104-43C745.34
thymus, neonate N06.CNhs11197.681-26C448.06
thymus, neonate N07.CNhs11211.713-19D342.68
thymus, neonate N10.CNhs11194.748-24E448.60
thymus, neonate N20.CNhs11186.820-7A248.14
thymus, neonate N25.CNhs11125.1362-25G749.36
thymus, neonate N30.CNhs11132.1393-42G249.91
tongue, adult.CNhs10499.32-1B431.74
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F725.30
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G519.47
urinary bladder, adult.CNhs10481.879-12E423.96
uterus, adult pregnant day19.CNhs10497.590-15F525.34
uterus, adult.CNhs10509.92-27E526.74
vagina, adult.CNhs10502.89-27D528.51
vesicular gland, adult.CNhs10491.51-27F832.10
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A194.31
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A294.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3103.69
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D791.43
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A489.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5118.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A696.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A799.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A894.71
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A998.89
whole body, embryo E11.CNhs11014.324-5I834.77
whole body, embryo E12.CNhs10587.857-27C935.91
whole body, embryo E13.CNhs10512.372-23H230.73
whole body, embryo E14.5.CNhs10578.420-27D236.95
whole body, embryo E14.CNhs10519.395-14B130.39
whole body, embryo E16.CNhs10514.453-14F225.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G535.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G533.79
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G536.26
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G539.67
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G532.70
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G535.46
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G539.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G541.81
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G543.02
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G543.82
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G541.72
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G542.25
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G539.15
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G535.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G532.92
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G534.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G538.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G535.32
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G540.84
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G535.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G542.26
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G541.04
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G542.10
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G528.06
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G536.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G540.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G531.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G543.69
whole body, embryo E17.5.CNhs10513.490-9F939.35
whole body, embryo E17.CNhs10517.475-3I528.98
whole body, embryo E18.CNhs10516.493-3B331.11
whole body, neonate N00.CNhs10525.657-19C235.02
whole body, neonate N01.CNhs10576.659-23C636.73
whole body, neonate N06.CNhs10515.692-21D130.00
whole body, neonate N10.CNhs10518.761-6B428.75





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.13e-0864
neural plate1.13e-0864
presumptive neural plate1.13e-0864
pre-chordal neural plate5.27e-0849
occipital lobe5.49e-0810
visual cortex5.49e-0810
neocortex5.49e-0810
ectoderm-derived structure6.03e-0895
ectoderm6.03e-0895
presumptive ectoderm6.03e-0895
regional part of nervous system6.37e-0854
central nervous system8.69e-0873
ecto-epithelium2.54e-0773
nervous system3.91e-0775
gray matter4.73e-0734
brain5.52e-0747
future brain5.52e-0747
neural tube7.13e-0752
neural rod7.13e-0752
future spinal cord7.13e-0752
neural keel7.13e-0752
brain grey matter7.83e-0729
regional part of telencephalon7.83e-0729
telencephalon7.83e-0729







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