FFCP PHASE1:Mm9::chr2:71367605..71367621,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13390|HGNC=|MCL_coexpression_id=845|UniProt=A2ATU7,Q64317|association_with_transcript=103bp_to_NM_010053,uc008kau.1,uc008kav.1_5end|description=CAGE_peak_9_at_Dlx1_5end|id=chr2:71367605..71367621,+|ontology_enrichment_celltype=CL:0000107!6.53e-14!9;CL:0000540!2.70e-11!33;CL:0000047!2.70e-11!33;CL:0000031!2.70e-11!33;CL:0000404!2.70e-11!33;CL:0000221!3.15e-09!44;CL:0000133!3.15e-09!44;CL:0002609!4.59e-09!6;CL:0000393!9.85e-09!39;CL:0000211!9.85e-09!39;CL:0002319!1.99e-08!43|ontology_enrichment_celltype_v019_2=CL:0000107,5.98e-44,9;CL:0000540,2.69e-26,33;CL:0000047,2.69e-26,33;CL:0000031,2.69e-26,33;CL:0000404,2.69e-26,33;CL:0000393,4.54e-22,39;CL:0000211,4.54e-22,39;CL:0002608,4.00e-20,3;CL:0002319,6.65e-20,43;CL:0000221,2.01e-19,44;CL:0000133,2.01e-19,44;CL:0002321,1.00e-11,70;CL:0002609,2.32e-10,6;CL:0000723,1.07e-08,91;CL:0000048,1.07e-08,91;CL:0000034,4.55e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!6.53e-14!9;UBERON:0000010!6.30e-11!11;UBERON:0001017!5.40e-09!73;UBERON:0005743!5.40e-09!73;UBERON:0000073!1.52e-08!75;UBERON:0001016!1.52e-08!75|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.98e-44,9;UBERON:0000010,7.27e-36,11;UBERON:0000013,1.91e-20,3;UBERON:0000011,5.44e-19,3;UBERON:0001017,1.24e-15,73;UBERON:0001016,3.51e-15,75;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0010313,3.86e-09,3;UBERON:0002342,3.86e-09,3;UBERON:0002005,3.86e-09,3;UBERON:0005428,3.86e-09,3;UBERON:0005062,3.86e-09,3;UBERON:0001954,5.89e-09,7;UBERON:0003022,5.89e-09,7;UBERON:0002421,5.89e-09,7;UBERON:0000349,5.89e-09,7;UBERON:0002600,5.89e-09,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,0,0,2.44981598429908,2.49198224647415,4.5960939330501,0,0,0,0.395658863190582,0.823388792421687,1.04182674111352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0.422530259330042,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88481528169297,0.347648640384553,0,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0.360124259610698,0,0.136072998302656,0,0,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617427674275707,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89304931649754,1.17131623288992,0.215423397732799,2.15071918157297,1.33679204449436,1.13230612315533,3.23848561339915,2.92255857911312,2.76701444562566,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0,0,0.128050304809739,0.17230640686684,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.197008964751127,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0|short_description=p9@Dlx1}} | ||
|EntrezGene=13390 | |||
|HGNC= | |||
|MCL_coexpression_id=845 | |||
|UniProt=A2ATU7,Q64317 | |||
|association_with_transcript=103bp_to_NM_010053,uc008kau.1,uc008kav.1_5end | |||
|description=CAGE_peak_9_at_Dlx1_5end | |||
|id=chr2:71367605..71367621,+ | |||
|ontology_enrichment_celltype=CL:0000107!6.53e-14!9;CL:0000540!2.70e-11!33;CL:0000047!2.70e-11!33;CL:0000031!2.70e-11!33;CL:0000404!2.70e-11!33;CL:0000221!3.15e-09!44;CL:0000133!3.15e-09!44;CL:0002609!4.59e-09!6;CL:0000393!9.85e-09!39;CL:0000211!9.85e-09!39;CL:0002319!1.99e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,5.98e-44,9;CL:0000540,2.69e-26,33;CL:0000047,2.69e-26,33;CL:0000031,2.69e-26,33;CL:0000404,2.69e-26,33;CL:0000393,4.54e-22,39;CL:0000211,4.54e-22,39;CL:0002608,4.00e-20,3;CL:0002319,6.65e-20,43;CL:0000221,2.01e-19,44;CL:0000133,2.01e-19,44;CL:0002321,1.00e-11,70;CL:0002609,2.32e-10,6;CL:0000723,1.07e-08,91;CL:0000048,1.07e-08,91;CL:0000034,4.55e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!6.53e-14!9;UBERON:0000010!6.30e-11!11;UBERON:0001017!5.40e-09!73;UBERON:0005743!5.40e-09!73;UBERON:0000073!1.52e-08!75;UBERON:0001016!1.52e-08!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.98e-44,9;UBERON:0000010,7.27e-36,11;UBERON:0000013,1.91e-20,3;UBERON:0000011,5.44e-19,3;UBERON:0001017,1.24e-15,73;UBERON:0001016,3.51e-15,75;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0010313,3.86e-09,3;UBERON:0002342,3.86e-09,3;UBERON:0002005,3.86e-09,3;UBERON:0005428,3.86e-09,3;UBERON:0005062,3.86e-09,3;UBERON:0001954,5.89e-09,7;UBERON:0003022,5.89e-09,7;UBERON:0002421,5.89e-09,7;UBERON:0000349,5.89e-09,7;UBERON:0002600,5.89e-09,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,0,0,2.44981598429908,2.49198224647415,4.5960939330501,0,0,0,0.395658863190582,0.823388792421687,1.04182674111352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0.422530259330042,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88481528169297,0.347648640384553,0,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0.360124259610698,0,0.136072998302656,0,0,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617427674275707,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89304931649754,1.17131623288992,0.215423397732799,2.15071918157297,1.33679204449436,1.13230612315533,3.23848561339915,2.92255857911312,2.76701444562566,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0,0,0.128050304809739,0.17230640686684,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.197008964751127,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p9@Dlx1 | |||
}} |
Revision as of 00:26, 14 September 2013
Short description: | p9@Dlx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Dlx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:845 |
Association with transcript: | 103bp_to_NM_010053, uc008kau.1, uc008kav.1_5end |
EntrezGene: | Dlx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 5.98e-44 | 9 |
neuron | 2.69e-26 | 33 |
neuronal stem cell | 2.69e-26 | 33 |
neuroblast | 2.69e-26 | 33 |
electrically signaling cell | 2.69e-26 | 33 |
electrically responsive cell | 4.54e-22 | 39 |
electrically active cell | 4.54e-22 | 39 |
hippocampal neuron | 4.00e-20 | 3 |
neural cell | 6.65e-20 | 43 |
ectodermal cell | 2.01e-19 | 44 |
neurectodermal cell | 2.01e-19 | 44 |
embryonic cell | 1.00e-11 | 70 |
neuron of cerebral cortex | 2.32e-10 | 6 |
somatic stem cell | 1.07e-08 | 91 |
multi fate stem cell | 1.07e-08 | 91 |
stem cell | 4.55e-08 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 5.98e-44 | 9 |
peripheral nervous system | 7.27e-36 | 11 |
sympathetic nervous system | 1.91e-20 | 3 |
parasympathetic nervous system | 5.44e-19 | 3 |
central nervous system | 1.24e-15 | 73 |
nervous system | 3.51e-15 | 75 |
ectoderm-derived structure | 1.10e-11 | 95 |
ectoderm | 1.10e-11 | 95 |
presumptive ectoderm | 1.10e-11 | 95 |
neural crest-derived structure | 3.86e-09 | 3 |
neural crest | 3.86e-09 | 3 |
enteric nervous system | 3.86e-09 | 3 |
vagal neural crest | 3.86e-09 | 3 |
neural fold | 3.86e-09 | 3 |
Ammon's horn | 5.89e-09 | 7 |
lobe parts of cerebral cortex | 5.89e-09 | 7 |
hippocampal formation | 5.89e-09 | 7 |
limbic system | 5.89e-09 | 7 |
limbic lobe | 5.89e-09 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.