FFCP PHASE1:Mm9::chr5:113642392..113642425,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=171|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:113642392..113642425,-|id=chr5:113642392..113642425,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000481!6.86e-10!230;UBERON:0001007!1.07e-08!128;UBERON:0001555!1.07e-08!128;UBERON:0007026!1.07e-08!128;UBERON:0004119!1.86e-08!130;UBERON:0000925!1.86e-08!130;UBERON:0006595!1.86e-08!130;UBERON:0005409!3.88e-08!59;UBERON:0004921!4.74e-08!126;UBERON:0004185!4.74e-08!126;UBERON:0000922!6.51e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.45e-11,47;UBERON:0000160,8.04e-10,31;UBERON:0004921,2.43e-08,114;UBERON:0001007,4.40e-08,116;UBERON:0001555,4.40e-08,116;UBERON:0007026,4.40e-08,116;UBERON:0004119,7.80e-08,118;UBERON:0000925,7.80e-08,118;UBERON:0006595,7.80e-08,118|phase1_expression=0,0.348975407639361,0,0.60492842261366,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.95995453676044,0.68822784320151,0,0,0.646413698057667,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0,0,0.148442139064825,0,0,0,0.452167921657868,0.705532242814229,0.376999773989026,0.741584903203122,0.433798070759735,0,0.647067399789637,0.662524555381181,0,3.72783522436244,0.585561594023094,0,4.59822699375465,0,0,0,0.299581278809645,0,0,0,0,0,0.324482526135515,0.916554274652847,0.124406970610093,0.505445516867349,0.210441855886474,0.390361328888111,0,0.180062129805349,0.452114453507145,0.95251098811859,0.640568601424249,0.281105173679186,0.517406741478031,0.215567992932842,0,0,0,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.621377317606506,0,0,0.23674473558521,0.590292695242212,0.308534225774757,0.465067889500816,1.07309360559848,0.934122738937356,0,3.2833492815819,1.21603214318784,0.730999937126662,0.439100230582101,0.805238512562231,0.210289948564127,0.411618449517138,4.95628174475697,1.32225283331772,0.426576501070468,0.232236671860439,0.38660238396628,0.605050573870028,1.33426826306922,0,2.84717436926707,0.988193728344065,5.02670417600539,1.59165177632921,1.55971269695296,4.49409704327111,7.13255564586491,6.77080329064848,0,0.456994050438915,1.1270773567308,0.610953983535943,2.13347735884388,1.61312385747733,1.51767689098217,1.62371162777562,1.56998727841375,0.863780147452604,0.592905254174298,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0,0.575392274901621,0.162135226775035,0.549122826376163,4.31304619582064,0.372140947668503,1.24815069245824,2.02063102357689,1.4351793081753,0.964887042726734,0.184753190166605,0,0.488894929326078,0.509235257325564,1.17345124144251,0.167506257441816,0.952174563544055,1.56106918286239,0.315270288212382,0.221464689648775,1.91345722388985,1.3109065177259,0.863424909329478,1.15719246865209,0,1.08781136763742,0,0,0.160550589987792,0.117211686592203,0,1.00988370881749,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0.395287777946524,0,0,0.178065603667255,1.30309567482861,0.494910368917606,1.32745138339963,0,0,0.754420319023592,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0.712994756769443,0.632073515871632,0,0,1.02131881726136,0.36012218806262,0.258717367565509,0,0.354680467284547,1.96205699362278,0.658196082408484,0,0,0.21183207086382,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.477489376012546,0,4.95517422270746,0.18542530201051,0.170870880797853,0,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0,0.158167996790568,0.609958401380546,0.540026704109006,1.04544148007234,1.52853794622324,1.34864346384821,0.495920734352016,1.30877970992015,3.11075935900303,0,0,0.448549638131936,0,0.388902376688095,0.129159823477731,0,0.469428954583016,1.17183946359555,0.314578033277133,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0,0.147689527174577,0,0.228620419965,0.201652370273681,0.292373642219257,0.0962118416403295,0,0.226730383615211,0.221985953374065,0.269141569828427,0,0.19318959403219,0.563047426353546,0.36630324853453,1.07184189539533,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.468207537349412,0.128050304809739,0.229741875822453,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0,0,0.0846146078916765,0.73171189149109,0,0.679020569229309,0.561142271657738,0.355905054372522,0.29551344712669,0,0.619747364743864,0.192906610981141,0.499621155875892,0.233931608445408,0,0,0,0.231867835620421|short_description=p@chr5:113642392..113642425,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=171 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:113642392..113642425,- | |||
|id=chr5:113642392..113642425,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!6.86e-10!230;UBERON:0001007!1.07e-08!128;UBERON:0001555!1.07e-08!128;UBERON:0007026!1.07e-08!128;UBERON:0004119!1.86e-08!130;UBERON:0000925!1.86e-08!130;UBERON:0006595!1.86e-08!130;UBERON:0005409!3.88e-08!59;UBERON:0004921!4.74e-08!126;UBERON:0004185!4.74e-08!126;UBERON:0000922!6.51e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.45e-11,47;UBERON:0000160,8.04e-10,31;UBERON:0004921,2.43e-08,114;UBERON:0001007,4.40e-08,116;UBERON:0001555,4.40e-08,116;UBERON:0007026,4.40e-08,116;UBERON:0004119,7.80e-08,118;UBERON:0000925,7.80e-08,118;UBERON:0006595,7.80e-08,118 | |||
|phase1_expression=0,0.348975407639361,0,0.60492842261366,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.95995453676044,0.68822784320151,0,0,0.646413698057667,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0,0,0.148442139064825,0,0,0,0.452167921657868,0.705532242814229,0.376999773989026,0.741584903203122,0.433798070759735,0,0.647067399789637,0.662524555381181,0,3.72783522436244,0.585561594023094,0,4.59822699375465,0,0,0,0.299581278809645,0,0,0,0,0,0.324482526135515,0.916554274652847,0.124406970610093,0.505445516867349,0.210441855886474,0.390361328888111,0,0.180062129805349,0.452114453507145,0.95251098811859,0.640568601424249,0.281105173679186,0.517406741478031,0.215567992932842,0,0,0,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.621377317606506,0,0,0.23674473558521,0.590292695242212,0.308534225774757,0.465067889500816,1.07309360559848,0.934122738937356,0,3.2833492815819,1.21603214318784,0.730999937126662,0.439100230582101,0.805238512562231,0.210289948564127,0.411618449517138,4.95628174475697,1.32225283331772,0.426576501070468,0.232236671860439,0.38660238396628,0.605050573870028,1.33426826306922,0,2.84717436926707,0.988193728344065,5.02670417600539,1.59165177632921,1.55971269695296,4.49409704327111,7.13255564586491,6.77080329064848,0,0.456994050438915,1.1270773567308,0.610953983535943,2.13347735884388,1.61312385747733,1.51767689098217,1.62371162777562,1.56998727841375,0.863780147452604,0.592905254174298,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0,0.575392274901621,0.162135226775035,0.549122826376163,4.31304619582064,0.372140947668503,1.24815069245824,2.02063102357689,1.4351793081753,0.964887042726734,0.184753190166605,0,0.488894929326078,0.509235257325564,1.17345124144251,0.167506257441816,0.952174563544055,1.56106918286239,0.315270288212382,0.221464689648775,1.91345722388985,1.3109065177259,0.863424909329478,1.15719246865209,0,1.08781136763742,0,0,0.160550589987792,0.117211686592203,0,1.00988370881749,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0.395287777946524,0,0,0.178065603667255,1.30309567482861,0.494910368917606,1.32745138339963,0,0,0.754420319023592,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0.712994756769443,0.632073515871632,0,0,1.02131881726136,0.36012218806262,0.258717367565509,0,0.354680467284547,1.96205699362278,0.658196082408484,0,0,0.21183207086382,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.477489376012546,0,4.95517422270746,0.18542530201051,0.170870880797853,0,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0,0.158167996790568,0.609958401380546,0.540026704109006,1.04544148007234,1.52853794622324,1.34864346384821,0.495920734352016,1.30877970992015,3.11075935900303,0,0,0.448549638131936,0,0.388902376688095,0.129159823477731,0,0.469428954583016,1.17183946359555,0.314578033277133,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0,0.147689527174577,0,0.228620419965,0.201652370273681,0.292373642219257,0.0962118416403295,0,0.226730383615211,0.221985953374065,0.269141569828427,0,0.19318959403219,0.563047426353546,0.36630324853453,1.07184189539533,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.468207537349412,0.128050304809739,0.229741875822453,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0,0,0.0846146078916765,0.73171189149109,0,0.679020569229309,0.561142271657738,0.355905054372522,0.29551344712669,0,0.619747364743864,0.192906610981141,0.499621155875892,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p@chr5:113642392..113642425,- | |||
}} |
Revision as of 06:00, 14 September 2013
Short description: | p@chr5:113642392..113642425, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:113642392..113642425, - |
Coexpression cluster: | MCL_coexpression_mm9:171 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.45e-11 | 47 |
intestine | 8.04e-10 | 31 |
subdivision of digestive tract | 2.43e-08 | 114 |
digestive system | 4.40e-08 | 116 |
digestive tract | 4.40e-08 | 116 |
primitive gut | 4.40e-08 | 116 |
endoderm-derived structure | 7.80e-08 | 118 |
endoderm | 7.80e-08 | 118 |
presumptive endoderm | 7.80e-08 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.