FFCP PHASE1:Mm9::chr1:156906688..156906705,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:156906688..156906705,-|id=chr1:156906688..156906705,-|ontology_enrichment_celltype=CL:0000838!3.66e-11!12;CL:0000988!7.07e-11!32;CL:0002032!7.07e-11!32;CL:0000037!7.07e-11!32;CL:0000566!7.07e-11!32;CL:0000837!7.07e-11!32;CL:0000542!3.44e-10!13;CL:0000051!3.44e-10!13;CL:0000084!2.77e-09!11;CL:0000827!2.77e-09!11;CL:0002031!4.94e-09!25;CL:0002320!9.09e-08!46;CL:0000134!9.09e-08!46;CL:0000738!1.89e-07!17;CL:0002087!1.89e-07!17|ontology_enrichment_celltype_v019_2=CL:0000838,3.88e-13,12;CL:0000542,3.69e-12,13;CL:0000051,3.69e-12,13;CL:0000945,3.65e-11,1;CL:0000236,3.65e-11,1;CL:0000826,3.65e-11,1;CL:0000738,2.18e-09,17;CL:0002087,2.18e-09,17;CL:0000084,2.14e-08,11;CL:0000827,2.14e-08,11|ontology_enrichment_disease=DOID:0060100!3.30e-08!3;DOID:4045!3.30e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,4.25e-14,3;DOID:4045,4.25e-14,3;DOID:0050686,1.63e-07,6|ontology_enrichment_uberon=UBERON:0002384!9.09e-08!46|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0.454999239389536,0,0,0,0.233612640595526,0.129123323441576,0.563154888606667,1.87251621057595,0.513653904676515,0.159544317990673,0,0,0,0,0,0.788655413395594,0.822686601634433,0.42438965179803,0,1.58865521921416,1.56719873483361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,0.7813353445238,2.09409497589519,36.4703522579229,5.46436387966757,1.94204141212461,0,0,0,0,0,0,0,0,0,3.18786951509699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0.69975726161829,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:156906688..156906705,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:156906688..156906705,- | |||
|id=chr1:156906688..156906705,- | |||
|ontology_enrichment_celltype=CL:0000838!3.66e-11!12;CL:0000988!7.07e-11!32;CL:0002032!7.07e-11!32;CL:0000037!7.07e-11!32;CL:0000566!7.07e-11!32;CL:0000837!7.07e-11!32;CL:0000542!3.44e-10!13;CL:0000051!3.44e-10!13;CL:0000084!2.77e-09!11;CL:0000827!2.77e-09!11;CL:0002031!4.94e-09!25;CL:0002320!9.09e-08!46;CL:0000134!9.09e-08!46;CL:0000738!1.89e-07!17;CL:0002087!1.89e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.88e-13,12;CL:0000542,3.69e-12,13;CL:0000051,3.69e-12,13;CL:0000945,3.65e-11,1;CL:0000236,3.65e-11,1;CL:0000826,3.65e-11,1;CL:0000738,2.18e-09,17;CL:0002087,2.18e-09,17;CL:0000084,2.14e-08,11;CL:0000827,2.14e-08,11 | |||
|ontology_enrichment_disease=DOID:0060100!3.30e-08!3;DOID:4045!3.30e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.25e-14,3;DOID:4045,4.25e-14,3;DOID:0050686,1.63e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!9.09e-08!46 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0.233612640595526,0.129123323441576,0.563154888606667,1.87251621057595,0.513653904676515,0.159544317990673,0,0,0,0,0,0.788655413395594,0.822686601634433,0.42438965179803,0,1.58865521921416,1.56719873483361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,0.7813353445238,2.09409497589519,36.4703522579229,5.46436387966757,1.94204141212461,0,0,0,0,0,0,0,0,0,3.18786951509699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0.69975726161829,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:156906688..156906705,- | |||
}} |
Revision as of 19:18, 13 September 2013
Short description: | p@chr1:156906688..156906705, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:156906688..156906705, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.88e-13 | 12 |
lymphocyte | 3.69e-12 | 13 |
common lymphoid progenitor | 3.69e-12 | 13 |
lymphocyte of B lineage | 3.65e-11 | 1 |
B cell | 3.65e-11 | 1 |
pro-B cell | 3.65e-11 | 1 |
leukocyte | 2.18e-09 | 17 |
nongranular leukocyte | 2.18e-09 | 17 |
T cell | 2.14e-08 | 11 |
pro-T cell | 2.14e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.25e-14 | 3 |
muscle cancer | 4.25e-14 | 3 |
organ system cancer | 1.63e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.