FFCP PHASE1:Mm9::chr11:106349732..106349749,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=56|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:106349732..106349749,-|id=chr11:106349732..106349749,-|ontology_enrichment_celltype=CL:0000181!3.16e-13!5;CL:0000417!3.16e-13!5;CL:0000668!3.16e-13!5;CL:0000412!3.16e-13!5;CL:0000182!3.16e-13!5|ontology_enrichment_celltype_v019_2=CL:0000182,1.92e-31,5;CL:0000223,3.51e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!2.59e-08!3;UBERON:0000478!2.59e-08!3;UBERON:0000158!2.59e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0005795,1.54e-22,4;UBERON:0000995,1.54e-22,4;UBERON:0001987,2.00e-20,2;UBERON:0003124,2.00e-20,2;UBERON:0004340,2.00e-20,2;UBERON:0003975,3.46e-18,5;UBERON:0005631,5.73e-14,3;UBERON:0000478,5.73e-14,3;UBERON:0000158,5.73e-14,3;UBERON:0003134,1.25e-11,8;UBERON:0002107,3.30e-11,22;UBERON:0007499,3.30e-11,22;UBERON:0006925,3.30e-11,22;UBERON:0009497,3.30e-11,22;UBERON:0000015,3.30e-11,22;UBERON:0002423,3.30e-11,22;UBERON:0006235,3.30e-11,22;UBERON:0008835,3.30e-11,22;UBERON:0003894,3.30e-11,22;UBERON:0004161,3.30e-11,22;UBERON:0008836,3.30e-11,22;UBERON:0006834,4.58e-11,1;UBERON:0009854,9.99e-11,23;UBERON:0009856,9.99e-11,23;UBERON:0004175,2.07e-10,9;UBERON:0000474,2.07e-10,9;UBERON:0002365,7.03e-10,25;UBERON:0002330,7.03e-10,25;UBERON:0003100,1.25e-08,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0.289864488701678,0,3.39985666853875,1.07940638327563,1.29955283489534,1.34408066129201,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.29688427812965,0.346970653532272,0,0.230615497256059,0,0,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0.395287777946524,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,2.7235168460303,0,0,0,0,0,0,0.608929898229199,5.16277757740163,1.0591603543191,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0.509935289981566,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,1.31377732815827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:106349732..106349749,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:106349732..106349749,- | |||
|id=chr11:106349732..106349749,- | |||
|ontology_enrichment_celltype=CL:0000181!3.16e-13!5;CL:0000417!3.16e-13!5;CL:0000668!3.16e-13!5;CL:0000412!3.16e-13!5;CL:0000182!3.16e-13!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.92e-31,5;CL:0000223,3.51e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.59e-08!3;UBERON:0000478!2.59e-08!3;UBERON:0000158!2.59e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005795,1.54e-22,4;UBERON:0000995,1.54e-22,4;UBERON:0001987,2.00e-20,2;UBERON:0003124,2.00e-20,2;UBERON:0004340,2.00e-20,2;UBERON:0003975,3.46e-18,5;UBERON:0005631,5.73e-14,3;UBERON:0000478,5.73e-14,3;UBERON:0000158,5.73e-14,3;UBERON:0003134,1.25e-11,8;UBERON:0002107,3.30e-11,22;UBERON:0007499,3.30e-11,22;UBERON:0006925,3.30e-11,22;UBERON:0009497,3.30e-11,22;UBERON:0000015,3.30e-11,22;UBERON:0002423,3.30e-11,22;UBERON:0006235,3.30e-11,22;UBERON:0008835,3.30e-11,22;UBERON:0003894,3.30e-11,22;UBERON:0004161,3.30e-11,22;UBERON:0008836,3.30e-11,22;UBERON:0006834,4.58e-11,1;UBERON:0009854,9.99e-11,23;UBERON:0009856,9.99e-11,23;UBERON:0004175,2.07e-10,9;UBERON:0000474,2.07e-10,9;UBERON:0002365,7.03e-10,25;UBERON:0002330,7.03e-10,25;UBERON:0003100,1.25e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0.289864488701678,0,3.39985666853875,1.07940638327563,1.29955283489534,1.34408066129201,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.29688427812965,0.346970653532272,0,0.230615497256059,0,0,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0.395287777946524,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,2.7235168460303,0,0,0,0,0,0,0.608929898229199,5.16277757740163,1.0591603543191,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0.509935289981566,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,1.31377732815827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:106349732..106349749,- | |||
}} |
Revision as of 18:32, 12 September 2013
Short description: | p@chr11:106349732..106349749, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:106349732..106349749, - |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.92e-31 | 5 |
endodermal cell | 3.51e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
embryonic uterus | 1.54e-22 | 4 |
uterus | 1.54e-22 | 4 |
placenta | 2.00e-20 | 2 |
chorion | 2.00e-20 | 2 |
allantois | 2.00e-20 | 2 |
internal female genitalia | 3.46e-18 | 5 |
extraembryonic membrane | 5.73e-14 | 3 |
extraembryonic structure | 5.73e-14 | 3 |
membranous layer | 5.73e-14 | 3 |
female reproductive organ | 1.25e-11 | 8 |
liver | 3.30e-11 | 22 |
epithelial sac | 3.30e-11 | 22 |
digestive gland | 3.30e-11 | 22 |
epithelium of foregut-midgut junction | 3.30e-11 | 22 |
anatomical boundary | 3.30e-11 | 22 |
hepatobiliary system | 3.30e-11 | 22 |
foregut-midgut junction | 3.30e-11 | 22 |
hepatic diverticulum | 3.30e-11 | 22 |
liver primordium | 3.30e-11 | 22 |
septum transversum | 3.30e-11 | 22 |
liver bud | 3.30e-11 | 22 |
uterus or analog | 4.58e-11 | 1 |
digestive tract diverticulum | 9.99e-11 | 23 |
sac | 9.99e-11 | 23 |
internal genitalia | 2.07e-10 | 9 |
female reproductive system | 2.07e-10 | 9 |
exocrine gland | 7.03e-10 | 25 |
exocrine system | 7.03e-10 | 25 |
female organism | 1.25e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.