FFCP PHASE1:Mm9::chr5:124315471..124315482,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=80885|HGNC=|MCL_coexpression_id=6|UniProt=Q9EP66,Q0VBA6|association_with_transcript=35bp_to_ENSMUST00000057145,uc008zop.2_5end|description=CAGE_peak_2_at_Niacr1_5end|id=chr5:124315471..124315482,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,2.08e-09,3;CL:0002202,2.08e-09,3;CL:0000069,2.08e-09,3;CL:0002632,2.08e-09,3;CL:0002368,2.08e-09,3;CL:0000307,2.08e-09,3;CL:0000377,2.08e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!3.66e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000014,8.56e-14,5;UBERON:0001003,8.56e-14,5;UBERON:0002097,8.56e-14,5;UBERON:0002199,8.56e-14,5;UBERON:0007029,8.56e-14,5;UBERON:0007376,8.56e-14,5;UBERON:0002416,8.56e-14,5;UBERON:0007383,8.56e-14,5;UBERON:0003126,2.08e-09,3;UBERON:0001005,2.08e-09,3;UBERON:0007196,2.08e-09,3;UBERON:0001558,2.08e-09,3;UBERON:0003102,6.02e-09,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0.42438965179803,0,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,5.02237956884289,3.1253413780952,0,35.8821207698919,17.7591826089196,3.88408282424923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,1.72084775396277,2.719885334831,0,0,0,0.140444420131752,0,0,0,0,0,0,0,2.59789249213457,2.02687892380079,2.52762222507392,0.22836775943812,0,0,0,0,0,0,0,0.251333182659351,0,0.289198713839823,0,0,0,0,0,0,0,0,2.63593273913025,3.59941638596045,2.28726408731516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.834141747676794,1.0447564995665,1.85203922767149,0,2.80885274925294,0.772043721344145,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.318909537314974,0,0.863424909329478,0.723245292907558,0,0.54390568381871,0,0.275936746304732,0,0,0,0.757412781613119,0,0,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0.220528398054962,2.80306630000516,1.29171541356724,1.93001359770099,1.55184047204077,1.31312719796049,0,0,0.170870880797853,0,0,0,0,0.228778173206523,1.5298058699447,3.21888340344413,2.62579950228405,0.954670618015114,0,0.203319467126849,0.540026704109006,1.67270636811575,2.40198820120795,1.61837215661785,1.07449492442937,0.785267825952089,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0,0.116876902181569,3.85441652145859,0,0,0,0.579568782096571,0,0.183151624267265,2.57242054894879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0.385813221962283,0,0,0.859484216193193,0.57386499620653,0,0|short_description=p2@Niacr1}} | ||
|EntrezGene=80885 | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=Q9EP66,Q0VBA6 | |||
|association_with_transcript=35bp_to_ENSMUST00000057145,uc008zop.2_5end | |||
|description=CAGE_peak_2_at_Niacr1_5end | |||
|id=chr5:124315471..124315482,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.08e-09,3;CL:0002202,2.08e-09,3;CL:0000069,2.08e-09,3;CL:0002632,2.08e-09,3;CL:0002368,2.08e-09,3;CL:0000307,2.08e-09,3;CL:0000377,2.08e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.66e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,8.56e-14,5;UBERON:0001003,8.56e-14,5;UBERON:0002097,8.56e-14,5;UBERON:0002199,8.56e-14,5;UBERON:0007029,8.56e-14,5;UBERON:0007376,8.56e-14,5;UBERON:0002416,8.56e-14,5;UBERON:0007383,8.56e-14,5;UBERON:0003126,2.08e-09,3;UBERON:0001005,2.08e-09,3;UBERON:0007196,2.08e-09,3;UBERON:0001558,2.08e-09,3;UBERON:0003102,6.02e-09,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0.42438965179803,0,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,5.02237956884289,3.1253413780952,0,35.8821207698919,17.7591826089196,3.88408282424923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,1.72084775396277,2.719885334831,0,0,0,0.140444420131752,0,0,0,0,0,0,0,2.59789249213457,2.02687892380079,2.52762222507392,0.22836775943812,0,0,0,0,0,0,0,0.251333182659351,0,0.289198713839823,0,0,0,0,0,0,0,0,2.63593273913025,3.59941638596045,2.28726408731516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.834141747676794,1.0447564995665,1.85203922767149,0,2.80885274925294,0.772043721344145,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.318909537314974,0,0.863424909329478,0.723245292907558,0,0.54390568381871,0,0.275936746304732,0,0,0,0.757412781613119,0,0,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0.220528398054962,2.80306630000516,1.29171541356724,1.93001359770099,1.55184047204077,1.31312719796049,0,0,0.170870880797853,0,0,0,0,0.228778173206523,1.5298058699447,3.21888340344413,2.62579950228405,0.954670618015114,0,0.203319467126849,0.540026704109006,1.67270636811575,2.40198820120795,1.61837215661785,1.07449492442937,0.785267825952089,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0,0.116876902181569,3.85441652145859,0,0,0,0.579568782096571,0,0.183151624267265,2.57242054894879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0.385813221962283,0,0,0.859484216193193,0.57386499620653,0,0 | |||
|short_description=p2@Niacr1 | |||
}} |
Revision as of 06:25, 14 September 2013
Short description: | p2@Niacr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Niacr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | 35bp_to_ENSMUST00000057145, uc008zop.2_5end |
EntrezGene: | Niacr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.08e-09 | 3 |
epithelial cell of tracheobronchial tree | 2.08e-09 | 3 |
branched duct epithelial cell | 2.08e-09 | 3 |
epithelial cell of lower respiratory tract | 2.08e-09 | 3 |
respiratory epithelial cell | 2.08e-09 | 3 |
tracheal epithelial cell | 2.08e-09 | 3 |
tracheoblast | 2.08e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 8.56e-14 | 5 |
skin epidermis | 8.56e-14 | 5 |
skin of body | 8.56e-14 | 5 |
integument | 8.56e-14 | 5 |
surface | 8.56e-14 | 5 |
outer epithelium | 8.56e-14 | 5 |
integumental system | 8.56e-14 | 5 |
enveloping layer of ectoderm | 8.56e-14 | 5 |
trachea | 2.08e-09 | 3 |
respiratory airway | 2.08e-09 | 3 |
tracheobronchial tree | 2.08e-09 | 3 |
lower respiratory tract | 2.08e-09 | 3 |
surface structure | 6.02e-09 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.