FFCP PHASE1:Mm9::chr10:25949549..25949569,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=268288|HGNC=|MCL_coexpression_id=187|UniProt=E9Q3G4,Q8C4H2,E9Q2L9,B9EKF8|association_with_transcript=36bp_to_ENSMUST00000060716,ENSMUST00000095777,ENSMUST00000164660,NM_001013766,NM_001115154,uc007ery.1,uc011xbx.1_5end|description=CAGE_peak_1_at_Samd3_5end|id=chr10:25949549..25949569,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002613,3.86e-09,3;CL:0000625,5.41e-08,1;CL:0000815,2.05e-07,1;CL:0000792,2.05e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000029,4.65e-08,1;UBERON:0001097,4.65e-08,1;UBERON:0003968,4.65e-08,1;UBERON:0001467,4.65e-08,1;UBERON:0000007,6.37e-08,8;UBERON:0003296,6.37e-08,8;UBERON:0010133,6.37e-08,8;UBERON:0000998,3.16e-07,1;UBERON:0007194,3.16e-07,1;UBERON:0006868,3.16e-07,1|phase1_expression=0,0,0,0,0,0,0,1.42035655785734,0,0,0,0,0.342401459862411,0.174840804837995,0,0.202475267389826,0,1.57731082679119,2.74228867211478,0,0.17008658030214,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4189077734164,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0.191690942036473,0,0,0,0,1.84640802822271,1.28082701043374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,12.9468941823586,0.445326417194474,0,0,0,0,0,0,0,0.289198713839823,0,0,0.662524555381181,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0.457500602818626,0.376963056338593,0.173824320192276,0,0.62336413367868,0,0,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0.219550115291051,0,0.210289948564127,0.411618449517138,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,1.47802552133284,0.189491411770485,0,0,0.234690248288502,0,0,0,0.315270288212382,0,0.318909537314974,0.655453258862952,0.345369963731791,0.144649058581512,0,0,0.983528546038072,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0.532020700926821,3.21063871683727,6.41741180348272,2.74018454203139,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,2.22132145037209,0,0.185194527369712,0.753473828018764,0.956859594047176,1.37266903923914,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.948033361884535,0.608175645870493,0.102710957164827,0.129920822977795,0.179026695667481,0.39736270956253,0,0,0.201932899896295,0.304827226619999,0,0.292373642219257,0.192423683280659,0.116876902181569,0,0,0,0,0,0.93841237725591,0.915758121336325,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.486213434136588,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0,0,0.29551344712669,0.409231043169689,0,0,0.499621155875892,0.467863216890817,0.214871054048298,0,0,0.231867835620421|short_description=p1@Samd3}} | ||
|EntrezGene=268288 | |||
|HGNC= | |||
|MCL_coexpression_id=187 | |||
|UniProt=E9Q3G4,Q8C4H2,E9Q2L9,B9EKF8 | |||
|association_with_transcript=36bp_to_ENSMUST00000060716,ENSMUST00000095777,ENSMUST00000164660,NM_001013766,NM_001115154,uc007ery.1,uc011xbx.1_5end | |||
|description=CAGE_peak_1_at_Samd3_5end | |||
|id=chr10:25949549..25949569,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,3.86e-09,3;CL:0000625,5.41e-08,1;CL:0000815,2.05e-07,1;CL:0000792,2.05e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,4.65e-08,1;UBERON:0001097,4.65e-08,1;UBERON:0003968,4.65e-08,1;UBERON:0001467,4.65e-08,1;UBERON:0000007,6.37e-08,8;UBERON:0003296,6.37e-08,8;UBERON:0010133,6.37e-08,8;UBERON:0000998,3.16e-07,1;UBERON:0007194,3.16e-07,1;UBERON:0006868,3.16e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,1.42035655785734,0,0,0,0,0.342401459862411,0.174840804837995,0,0.202475267389826,0,1.57731082679119,2.74228867211478,0,0.17008658030214,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4189077734164,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0.191690942036473,0,0,0,0,1.84640802822271,1.28082701043374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,12.9468941823586,0.445326417194474,0,0,0,0,0,0,0,0.289198713839823,0,0,0.662524555381181,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0.457500602818626,0.376963056338593,0.173824320192276,0,0.62336413367868,0,0,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0.219550115291051,0,0.210289948564127,0.411618449517138,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,1.47802552133284,0.189491411770485,0,0,0.234690248288502,0,0,0,0.315270288212382,0,0.318909537314974,0.655453258862952,0.345369963731791,0.144649058581512,0,0,0.983528546038072,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0.532020700926821,3.21063871683727,6.41741180348272,2.74018454203139,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,2.22132145037209,0,0.185194527369712,0.753473828018764,0.956859594047176,1.37266903923914,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.948033361884535,0.608175645870493,0.102710957164827,0.129920822977795,0.179026695667481,0.39736270956253,0,0,0.201932899896295,0.304827226619999,0,0.292373642219257,0.192423683280659,0.116876902181569,0,0,0,0,0,0.93841237725591,0.915758121336325,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.486213434136588,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0,0,0.29551344712669,0.409231043169689,0,0,0.499621155875892,0.467863216890817,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p1@Samd3 | |||
}} |
Revision as of 16:30, 12 September 2013
Short description: | p1@Samd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Samd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:187 |
Association with transcript: | 36bp_to_ENSMUST00000060716, ENSMUST00000095777, ENSMUST00000164660, NM_001013766, NM_001115154, uc007ery.1, uc011xbx.1_5end |
EntrezGene: | Samd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 3.86e-09 | 3 |
CD8-positive, alpha-beta T cell | 5.41e-08 | 1 |
regulatory T cell | 2.05e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.05e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymph node | 4.65e-08 | 1 |
axillary lymph node | 4.65e-08 | 1 |
peripheral lymph node | 4.65e-08 | 1 |
shoulder | 4.65e-08 | 1 |
pituitary gland | 6.37e-08 | 8 |
gland of diencephalon | 6.37e-08 | 8 |
neuroendocrine gland | 6.37e-08 | 8 |
seminal vesicle | 3.16e-07 | 1 |
vesicular gland | 3.16e-07 | 1 |
seminal fluid secreting gland | 3.16e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.