FFCP PHASE1:Mm9::chr8:96677906..96677921,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=176|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:96677906..96677921,-|id=chr8:96677906..96677921,-|ontology_enrichment_celltype=CL:0002453!4.29e-15!8;CL:0000333!8.15e-12!10;CL:0000095!8.15e-12!10;CL:0000243!8.15e-12!10;CL:0000123!8.15e-12!10;CL:0000125!8.15e-12!10;CL:0000030!8.15e-12!10;CL:0000339!8.15e-12!10;CL:0000221!2.12e-11!44;CL:0000133!2.12e-11!44;CL:0000128!1.19e-10!6;CL:0000126!1.19e-10!6;CL:0000127!1.19e-10!6;CL:0002319!2.15e-10!43;CL:0000055!2.11e-08!50;CL:0002610!2.24e-07!3|ontology_enrichment_celltype_v019_2=CL:0002453,1.09e-59,8;CL:0000333,8.65e-48,10;CL:0000095,8.65e-48,10;CL:0000243,8.65e-48,10;CL:0000123,8.65e-48,10;CL:0000125,8.65e-48,10;CL:0000030,8.65e-48,10;CL:0000339,8.65e-48,10;CL:0000128,7.27e-41,6;CL:0000126,7.27e-41,6;CL:0000127,7.27e-41,6;CL:0000878,1.01e-20,2;CL:0002605,1.01e-20,2;CL:0000129,1.01e-20,2;CL:0002604,1.01e-20,2;CL:0002319,4.15e-18,43;CL:0000221,1.08e-17,44;CL:0000133,1.08e-17,44;CL:0002321,4.95e-11,70;CL:0002194,7.23e-11,4;CL:0000766,7.23e-11,4;CL:0000234,7.23e-11,4;CL:0000576,7.23e-11,4;CL:0000235,7.23e-11,4;CL:0000864,7.23e-11,4;CL:0002009,7.23e-11,4;CL:0000040,7.23e-11,4;CL:0000559,7.23e-11,4;CL:0000219,8.80e-09,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.48e-25!73;UBERON:0005743!4.48e-25!73;UBERON:0000073!3.32e-24!75;UBERON:0001016!3.32e-24!75;UBERON:0000955!1.96e-20!50;UBERON:0006238!1.96e-20!50;UBERON:0001049!3.46e-19!52;UBERON:0005068!3.46e-19!52;UBERON:0006241!3.46e-19!52;UBERON:0007135!3.46e-19!52;UBERON:0002616!4.74e-19!49;UBERON:0004121!5.10e-17!102;UBERON:0000924!5.10e-17!102;UBERON:0006601!5.10e-17!102;UBERON:0000033!2.09e-16!63;UBERON:0002619!3.75e-14!17;UBERON:0002020!1.98e-13!34;UBERON:0000956!3.77e-13!21;UBERON:0001869!3.77e-13!21;UBERON:0000203!3.77e-13!21;UBERON:0002346!1.76e-12!71;UBERON:0003075!1.76e-12!71;UBERON:0007284!1.76e-12!71;UBERON:0003080!7.20e-11!40;UBERON:0002791!1.53e-10!29;UBERON:0003528!1.53e-10!29;UBERON:0001893!1.53e-10!29;UBERON:0007811!2.10e-10!86;UBERON:0003076!2.75e-10!12;UBERON:0003057!2.75e-10!12;UBERON:0002780!1.16e-09!39;UBERON:0001890!1.16e-09!39;UBERON:0006240!1.16e-09!39;UBERON:0000153!5.13e-09!94;UBERON:0003056!3.48e-08!49;UBERON:0001954!5.44e-08!7;UBERON:0003022!5.44e-08!7;UBERON:0002421!5.44e-08!7;UBERON:0000349!5.44e-08!7;UBERON:0002600!5.44e-08!7;UBERON:0002021!1.01e-07!10;UBERON:0000411!1.01e-07!10;UBERON:0001950!1.01e-07!10;UBERON:0004684!2.24e-07!3;UBERON:0002275!2.24e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.45e-10,73;UBERON:0001016,2.82e-10,75;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,8.50298109883741,3.95435128922049,7.97162586204562,2.51975558925653,2.87505128729943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79360176829448,7.30014780110954,0,0,0,0.571301968807607,0.220868540951614,0.122490799214954,0,0.919218786610021,1.10115880999389,0.383062014255563,0.307213066512487,0,0,0,0,0,1.37518422999129,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.599162557619291,0,0,0.347648640384553,0.255715457330331,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0|short_description=p@chr8:96677906..96677921,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:96677906..96677921,- | |||
|id=chr8:96677906..96677921,- | |||
|ontology_enrichment_celltype=CL:0002453!4.29e-15!8;CL:0000333!8.15e-12!10;CL:0000095!8.15e-12!10;CL:0000243!8.15e-12!10;CL:0000123!8.15e-12!10;CL:0000125!8.15e-12!10;CL:0000030!8.15e-12!10;CL:0000339!8.15e-12!10;CL:0000221!2.12e-11!44;CL:0000133!2.12e-11!44;CL:0000128!1.19e-10!6;CL:0000126!1.19e-10!6;CL:0000127!1.19e-10!6;CL:0002319!2.15e-10!43;CL:0000055!2.11e-08!50;CL:0002610!2.24e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.09e-59,8;CL:0000333,8.65e-48,10;CL:0000095,8.65e-48,10;CL:0000243,8.65e-48,10;CL:0000123,8.65e-48,10;CL:0000125,8.65e-48,10;CL:0000030,8.65e-48,10;CL:0000339,8.65e-48,10;CL:0000128,7.27e-41,6;CL:0000126,7.27e-41,6;CL:0000127,7.27e-41,6;CL:0000878,1.01e-20,2;CL:0002605,1.01e-20,2;CL:0000129,1.01e-20,2;CL:0002604,1.01e-20,2;CL:0002319,4.15e-18,43;CL:0000221,1.08e-17,44;CL:0000133,1.08e-17,44;CL:0002321,4.95e-11,70;CL:0002194,7.23e-11,4;CL:0000766,7.23e-11,4;CL:0000234,7.23e-11,4;CL:0000576,7.23e-11,4;CL:0000235,7.23e-11,4;CL:0000864,7.23e-11,4;CL:0002009,7.23e-11,4;CL:0000040,7.23e-11,4;CL:0000559,7.23e-11,4;CL:0000219,8.80e-09,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.48e-25!73;UBERON:0005743!4.48e-25!73;UBERON:0000073!3.32e-24!75;UBERON:0001016!3.32e-24!75;UBERON:0000955!1.96e-20!50;UBERON:0006238!1.96e-20!50;UBERON:0001049!3.46e-19!52;UBERON:0005068!3.46e-19!52;UBERON:0006241!3.46e-19!52;UBERON:0007135!3.46e-19!52;UBERON:0002616!4.74e-19!49;UBERON:0004121!5.10e-17!102;UBERON:0000924!5.10e-17!102;UBERON:0006601!5.10e-17!102;UBERON:0000033!2.09e-16!63;UBERON:0002619!3.75e-14!17;UBERON:0002020!1.98e-13!34;UBERON:0000956!3.77e-13!21;UBERON:0001869!3.77e-13!21;UBERON:0000203!3.77e-13!21;UBERON:0002346!1.76e-12!71;UBERON:0003075!1.76e-12!71;UBERON:0007284!1.76e-12!71;UBERON:0003080!7.20e-11!40;UBERON:0002791!1.53e-10!29;UBERON:0003528!1.53e-10!29;UBERON:0001893!1.53e-10!29;UBERON:0007811!2.10e-10!86;UBERON:0003076!2.75e-10!12;UBERON:0003057!2.75e-10!12;UBERON:0002780!1.16e-09!39;UBERON:0001890!1.16e-09!39;UBERON:0006240!1.16e-09!39;UBERON:0000153!5.13e-09!94;UBERON:0003056!3.48e-08!49;UBERON:0001954!5.44e-08!7;UBERON:0003022!5.44e-08!7;UBERON:0002421!5.44e-08!7;UBERON:0000349!5.44e-08!7;UBERON:0002600!5.44e-08!7;UBERON:0002021!1.01e-07!10;UBERON:0000411!1.01e-07!10;UBERON:0001950!1.01e-07!10;UBERON:0004684!2.24e-07!3;UBERON:0002275!2.24e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.45e-10,73;UBERON:0001016,2.82e-10,75;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,8.50298109883741,3.95435128922049,7.97162586204562,2.51975558925653,2.87505128729943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79360176829448,7.30014780110954,0,0,0,0.571301968807607,0.220868540951614,0.122490799214954,0,0.919218786610021,1.10115880999389,0.383062014255563,0.307213066512487,0,0,0,0,0,1.37518422999129,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.599162557619291,0,0,0.347648640384553,0.255715457330331,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr8:96677906..96677921,- | |||
}} |
Revision as of 16:30, 14 September 2013
Short description: | p@chr8:96677906..96677921, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:96677906..96677921, - |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.09e-59 | 8 |
migratory neural crest cell | 8.65e-48 | 10 |
neuron associated cell | 8.65e-48 | 10 |
glial cell (sensu Vertebrata) | 8.65e-48 | 10 |
neuron associated cell (sensu Vertebrata) | 8.65e-48 | 10 |
glial cell | 8.65e-48 | 10 |
glioblast | 8.65e-48 | 10 |
glioblast (sensu Vertebrata) | 8.65e-48 | 10 |
oligodendrocyte | 7.27e-41 | 6 |
macroglial cell | 7.27e-41 | 6 |
astrocyte | 7.27e-41 | 6 |
central nervous system macrophage | 1.01e-20 | 2 |
astrocyte of the cerebral cortex | 1.01e-20 | 2 |
microglial cell | 1.01e-20 | 2 |
astrocyte of the hippocampus | 1.01e-20 | 2 |
neural cell | 4.15e-18 | 43 |
ectodermal cell | 1.08e-17 | 44 |
neurectodermal cell | 1.08e-17 | 44 |
embryonic cell | 4.95e-11 | 70 |
monopoietic cell | 7.23e-11 | 4 |
myeloid leukocyte | 7.23e-11 | 4 |
phagocyte | 7.23e-11 | 4 |
monocyte | 7.23e-11 | 4 |
macrophage | 7.23e-11 | 4 |
tissue-resident macrophage | 7.23e-11 | 4 |
macrophage dendritic cell progenitor | 7.23e-11 | 4 |
monoblast | 7.23e-11 | 4 |
promonocyte | 7.23e-11 | 4 |
motile cell | 8.80e-09 | 54 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.45e-10 | 73 |
nervous system | 2.82e-10 | 75 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.