FFCP PHASE1:Mm9::chr11:66771440..66771478,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=44bp_to_ENSMUST00000127166_5end|description=CAGE_peak_1_at_ENSMUST00000127166_5end|id=chr11:66771440..66771478,+|ontology_enrichment_celltype=CL:0002563!2.36e-20!9;CL:0002251!2.36e-20!9;CL:0000239!7.88e-15!6;CL:0000677!7.88e-15!6;CL:0000212!7.88e-15!6;CL:0000584!7.88e-15!6;CL:0000075!1.35e-12!7;CL:0000066!8.84e-12!25;CL:0002076!1.72e-11!15;CL:0000473!9.12e-09!3;CL:0000627!9.12e-09!3;CL:0000682!9.12e-09!3;CL:0000223!3.52e-08!20;CL:0002250!4.04e-07!3|ontology_enrichment_celltype_v019_2=CL:0002563,9.30e-23,9;CL:0002251,9.30e-23,9;CL:0000239,1.97e-20,6;CL:0000677,1.97e-20,6;CL:0000584,1.97e-20,6;CL:0000075,1.96e-17,7;CL:0000066,1.02e-14,25;CL:0002076,3.45e-13,15;CL:0000682,8.29e-12,3;CL:0000223,1.35e-09,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.18e-34!15;UBERON:0000160!7.77e-34!43;UBERON:0001242!1.69e-29!13;UBERON:0000060!1.69e-29!13;UBERON:0001262!1.69e-29!13;UBERON:0004786!1.69e-29!13;UBERON:0005409!6.24e-29!59;UBERON:0003350!2.36e-20!9;UBERON:0004808!2.36e-20!9;UBERON:0001277!2.36e-20!9;UBERON:0004923!8.37e-20!24;UBERON:0000485!2.53e-16!11;UBERON:0001007!1.11e-12!128;UBERON:0001555!1.11e-12!128;UBERON:0007026!1.11e-12!128;UBERON:0004119!2.26e-12!130;UBERON:0000925!2.26e-12!130;UBERON:0006595!2.26e-12!130;UBERON:0004921!8.70e-11!126;UBERON:0004185!8.70e-11!126;UBERON:0000331!1.79e-08!3;UBERON:0002116!1.79e-08!3;UBERON:0001204!1.79e-08!3;UBERON:0001168!1.79e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.11e-42,15;UBERON:0000160,2.36e-39,31;UBERON:0001242,1.35e-35,13;UBERON:0001262,1.35e-35,13;UBERON:0004786,1.35e-35,13;UBERON:0005409,2.74e-27,47;UBERON:0004923,3.82e-25,24;UBERON:0003350,9.30e-23,9;UBERON:0004808,9.30e-23,9;UBERON:0001277,9.30e-23,9;UBERON:0000485,2.07e-18,11;UBERON:0002108,3.65e-14,4;UBERON:0000331,2.16e-11,3;UBERON:0002116,2.16e-11,3;UBERON:0001204,2.16e-11,3;UBERON:0001168,2.16e-11,3;UBERON:0001007,5.42e-11,116;UBERON:0001555,5.42e-11,116;UBERON:0007026,5.42e-11,116;UBERON:0004119,9.88e-11,118;UBERON:0000925,9.88e-11,118;UBERON:0006595,9.88e-11,118;UBERON:0004921,7.19e-09,114;UBERON:0001962,9.86e-08,2;UBERON:0001961,9.86e-08,2;UBERON:0001744,9.86e-08,2;UBERON:0001155,1.96e-07,2;UBERON:0000059,1.96e-07,2|phase1_expression=0,27.9180326111489,21.8399634906977,13.3084252975005,12.5223932486587,8.72972213941827,8.64366770203445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,12.6394014006791,10.782236210157,29.860062133981,27.5687677541808,20.0388246397877,18.812318526181,19.4063199915147,15.5211357458713,0,0,0,2.3108129580102,1.32987716286794,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,12.517395705221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9038198384653,14.8092317331585,0,0,0,0.201683524623343,0.22237804384487,0,8.54152310780121,0.329397909448022,0,0.198956472041151,0.19496408711912,2.69645822596266,10.59076444386,7.36822711041159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0.26175594198403,1.68499465279331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000127166}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt= | |||
|association_with_transcript=44bp_to_ENSMUST00000127166_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000127166_5end | |||
|id=chr11:66771440..66771478,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.36e-20!9;CL:0002251!2.36e-20!9;CL:0000239!7.88e-15!6;CL:0000677!7.88e-15!6;CL:0000212!7.88e-15!6;CL:0000584!7.88e-15!6;CL:0000075!1.35e-12!7;CL:0000066!8.84e-12!25;CL:0002076!1.72e-11!15;CL:0000473!9.12e-09!3;CL:0000627!9.12e-09!3;CL:0000682!9.12e-09!3;CL:0000223!3.52e-08!20;CL:0002250!4.04e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.30e-23,9;CL:0002251,9.30e-23,9;CL:0000239,1.97e-20,6;CL:0000677,1.97e-20,6;CL:0000584,1.97e-20,6;CL:0000075,1.96e-17,7;CL:0000066,1.02e-14,25;CL:0002076,3.45e-13,15;CL:0000682,8.29e-12,3;CL:0000223,1.35e-09,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.18e-34!15;UBERON:0000160!7.77e-34!43;UBERON:0001242!1.69e-29!13;UBERON:0000060!1.69e-29!13;UBERON:0001262!1.69e-29!13;UBERON:0004786!1.69e-29!13;UBERON:0005409!6.24e-29!59;UBERON:0003350!2.36e-20!9;UBERON:0004808!2.36e-20!9;UBERON:0001277!2.36e-20!9;UBERON:0004923!8.37e-20!24;UBERON:0000485!2.53e-16!11;UBERON:0001007!1.11e-12!128;UBERON:0001555!1.11e-12!128;UBERON:0007026!1.11e-12!128;UBERON:0004119!2.26e-12!130;UBERON:0000925!2.26e-12!130;UBERON:0006595!2.26e-12!130;UBERON:0004921!8.70e-11!126;UBERON:0004185!8.70e-11!126;UBERON:0000331!1.79e-08!3;UBERON:0002116!1.79e-08!3;UBERON:0001204!1.79e-08!3;UBERON:0001168!1.79e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.11e-42,15;UBERON:0000160,2.36e-39,31;UBERON:0001242,1.35e-35,13;UBERON:0001262,1.35e-35,13;UBERON:0004786,1.35e-35,13;UBERON:0005409,2.74e-27,47;UBERON:0004923,3.82e-25,24;UBERON:0003350,9.30e-23,9;UBERON:0004808,9.30e-23,9;UBERON:0001277,9.30e-23,9;UBERON:0000485,2.07e-18,11;UBERON:0002108,3.65e-14,4;UBERON:0000331,2.16e-11,3;UBERON:0002116,2.16e-11,3;UBERON:0001204,2.16e-11,3;UBERON:0001168,2.16e-11,3;UBERON:0001007,5.42e-11,116;UBERON:0001555,5.42e-11,116;UBERON:0007026,5.42e-11,116;UBERON:0004119,9.88e-11,118;UBERON:0000925,9.88e-11,118;UBERON:0006595,9.88e-11,118;UBERON:0004921,7.19e-09,114;UBERON:0001962,9.86e-08,2;UBERON:0001961,9.86e-08,2;UBERON:0001744,9.86e-08,2;UBERON:0001155,1.96e-07,2;UBERON:0000059,1.96e-07,2 | |||
|phase1_expression=0,27.9180326111489,21.8399634906977,13.3084252975005,12.5223932486587,8.72972213941827,8.64366770203445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,12.6394014006791,10.782236210157,29.860062133981,27.5687677541808,20.0388246397877,18.812318526181,19.4063199915147,15.5211357458713,0,0,0,2.3108129580102,1.32987716286794,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,12.517395705221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9038198384653,14.8092317331585,0,0,0,0.201683524623343,0.22237804384487,0,8.54152310780121,0.329397909448022,0,0.198956472041151,0.19496408711912,2.69645822596266,10.59076444386,7.36822711041159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0.26175594198403,1.68499465279331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000127166 | |||
}} |
Revision as of 20:24, 12 September 2013
Short description: | p1@ENSMUST00000127166 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000127166_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 44bp_to_ENSMUST00000127166_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.30e-23 | 9 |
epithelial cell of alimentary canal | 9.30e-23 | 9 |
brush border epithelial cell | 1.97e-20 | 6 |
gut absorptive cell | 1.97e-20 | 6 |
enterocyte | 1.97e-20 | 6 |
columnar/cuboidal epithelial cell | 1.96e-17 | 7 |
epithelial cell | 1.02e-14 | 25 |
endo-epithelial cell | 3.45e-13 | 15 |
M cell of gut | 8.29e-12 | 3 |
endodermal cell | 1.35e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 7.11e-42 | 15 |
intestine | 2.36e-39 | 31 |
intestinal mucosa | 1.35e-35 | 13 |
wall of intestine | 1.35e-35 | 13 |
gastrointestinal system mucosa | 1.35e-35 | 13 |
gastrointestinal system | 2.74e-27 | 47 |
organ component layer | 3.82e-25 | 24 |
epithelium of mucosa | 9.30e-23 | 9 |
gastrointestinal system epithelium | 9.30e-23 | 9 |
intestinal epithelium | 9.30e-23 | 9 |
simple columnar epithelium | 2.07e-18 | 11 |
small intestine | 3.65e-14 | 4 |
ileal mucosa | 2.16e-11 | 3 |
ileum | 2.16e-11 | 3 |
mucosa of small intestine | 2.16e-11 | 3 |
wall of small intestine | 2.16e-11 | 3 |
digestive system | 5.42e-11 | 116 |
digestive tract | 5.42e-11 | 116 |
primitive gut | 5.42e-11 | 116 |
endoderm-derived structure | 9.88e-11 | 118 |
endoderm | 9.88e-11 | 118 |
presumptive endoderm | 9.88e-11 | 118 |
subdivision of digestive tract | 7.19e-09 | 114 |
gut-associated lymphoid tissue | 9.86e-08 | 2 |
mucosa-associated lymphoid tissue | 9.86e-08 | 2 |
lymphoid tissue | 9.86e-08 | 2 |
colon | 1.96e-07 | 2 |
large intestine | 1.96e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.