FFCP PHASE1:Mm9::chr6:125263843..125263854,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17000|HGNC=|MCL_coexpression_id=436|UniProt=B2RRV3,P50284,Q8BJV0|association_with_transcript=33bp_to_NM_010736,uc009duj.1_5end|description=CAGE_peak_3_at_Ltbr_5end|id=chr6:125263843..125263854,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!8.58e-14!130;UBERON:0000925!8.58e-14!130;UBERON:0006595!8.58e-14!130;UBERON:0001007!1.27e-13!128;UBERON:0001555!1.27e-13!128;UBERON:0007026!1.27e-13!128;UBERON:0004921!1.02e-12!126;UBERON:0004185!1.02e-12!126;UBERON:0005409!4.17e-12!59;UBERON:0000160!1.09e-11!43;UBERON:0009569!1.49e-09!66;UBERON:0002100!2.09e-08!98;UBERON:0000344!3.72e-08!15;UBERON:0005256!5.64e-08!47;UBERON:0001242!3.81e-07!13;UBERON:0000060!3.81e-07!13;UBERON:0001262!3.81e-07!13;UBERON:0004786!3.81e-07!13;UBERON:0005177!4.42e-07!85;UBERON:0005172!4.99e-07!49;UBERON:0005173!4.99e-07!49;UBERON:0002417!4.99e-07!49;UBERON:0000916!4.99e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.19e-14,31;UBERON:0004119,4.81e-14,118;UBERON:0000925,4.81e-14,118;UBERON:0006595,4.81e-14,118;UBERON:0001007,7.02e-14,116;UBERON:0001555,7.02e-14,116;UBERON:0007026,7.02e-14,116;UBERON:0005409,2.32e-13,47;UBERON:0004921,6.21e-13,114;UBERON:0002100,3.46e-11,90;UBERON:0009569,1.41e-09,66;UBERON:0005256,3.16e-09,45;UBERON:0005177,4.46e-09,79;UBERON:0000344,1.53e-08,15;UBERON:0003104,5.57e-08,61;UBERON:0009142,5.57e-08,61;UBERON:0001242,1.79e-07,13;UBERON:0001262,1.79e-07,13;UBERON:0004786,1.79e-07,13;UBERON:0005172,3.84e-07,49;UBERON:0005173,3.84e-07,49;UBERON:0002417,3.84e-07,49;UBERON:0000916,3.84e-07,49;UBERON:0009854,8.47e-07,23;UBERON:0009856,8.47e-07,23|phase1_expression=0.80074423552397,14.3079917132138,14.1049764210756,9.37639055051173,9.01612313903425,4.70061961353291,2.80335168714631,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0,0,0.137114433605739,0,1.02051948181284,0.198581902401771,0,5.59973479776923,5.50582274561208,12.0588712464154,7.32295393470427,7.75696437669201,4.94060890586572,7.05684363327806,10.199603490144,0,0,0,1.73310971850765,4.3221007793208,2.04169356262369,2.09265815368454,4.6880120671428,2.09409497589519,1.76469446409304,0.683045484958446,3.39857247121808,2.14024590558481,3.34543873024398,3.67093504323363,12.5182615095686,1.52617609466313,2.19686182734472,1.94429899074283,2.09979632438044,1.43752564364972,0,0,0,3.8588915405392,4.01146815914259,2.06268836910977,0,0,0,7.79342423759004,3.55717918444456,6.29929802096979,3.9554654502679,4.9733608046227,3.29560121570245,3.84218305321555,0.207379224616955,0,0.210324961351382,0,0.662605622854841,0.244981598429908,0.287536413054709,0,0,0.127687338085188,0,0.131886287730194,0.274462930807229,0,0.279182999001381,0,0,0,0.284743361598206,0.372798891650601,1.81742863999642,1.36028808192214,2.02905142091174,6.88339101585109,4.0798280022465,4.85732872474035,2.59910566979068,2.68816132258401,3.23022166303029,5.79463096765396,3.37721805983729,4.94675404314476,0.563373679106722,5.13305909657271,0,0,1.08245520505607,2.02687892380079,2.02209778005913,4.5673551887624,0.258937883647172,1.03909497345377,1.73485326766136,2.13125834818499,1.61430848079241,2.11011696773672,2.93971767839262,2.63899841792318,3.21353458054686,1.01219549843938,0,1.61766849947409,0.441683036920787,0.969750506270444,5.59175283654366,0,0.209446706813455,6.64188343542338,0.718890747035522,1.79970819298022,1.27070227073065,0.149790639404823,0,0.376963056338593,0,0.255715457330331,0.41557608911912,0,1.93494791315601,1.99051152976149,2.52722758433675,0.631325567659422,0.520481771850815,1.37941262660084,0.900310649026746,0.90422890701429,0.612328492361951,0.896796041993948,0.749613796477831,0,0.862271971731369,0.378212160335639,0.879755620819744,1.31517439456545,0.278047249225598,1.74126083261083,1.23469281844766,0.995171334092466,0,1.28673953557358,2.27330799516474,1.44988040774851,1.40715635988658,0.720248245844059,1.42046841351126,0.590292695242212,0.771335564436891,0.465067889500816,0.536546802799238,1.86824547787471,1.31647879930784,1.31333971263276,1.29710095273369,0.438599962275997,0.658650345873152,1.07365135008297,0.841159794256509,0.411618449517138,8.92130714056255,11.9002754998595,1.2797295032114,0.464473343720877,2.57734922644187,5.24377164020691,3.55804870151792,4.56541502670142,9.01605216934572,8.23494773620054,8.29406189040889,5.37182474511107,4.874102177978,7.19055526923377,5.18731319699266,6.96994456390285,3.41402221715547,1.71372768914593,2.25415471346161,1.22190796707189,2.13347735884388,2.24434623649019,2.40298841072178,1.62371162777562,3.1399745568275,3.08492909804501,8.00422093135302,1.33476084572875,1.57247196090562,1.79889689907883,1.01430060694251,2.65294875727659,1.78238096246994,1.43848068725405,1.62135226775035,5.49122826376163,5.75072826109418,4.09355042435354,6.55279113540577,5.80931419278357,6.09951205974501,7.71909634181387,3.32555742299888,0.947457058852424,1.30371981153621,2.20668611507745,1.87752198630802,2.5125938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| ||
|EntrezGene=17000 | |||
|HGNC= | |||
|MCL_coexpression_id=436 | |||
|UniProt=B2RRV3,P50284,Q8BJV0 | |||
|association_with_transcript=33bp_to_NM_010736,uc009duj.1_5end | |||
|description=CAGE_peak_3_at_Ltbr_5end | |||
|id=chr6:125263843..125263854,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!8.58e-14!130;UBERON:0000925!8.58e-14!130;UBERON:0006595!8.58e-14!130;UBERON:0001007!1.27e-13!128;UBERON:0001555!1.27e-13!128;UBERON:0007026!1.27e-13!128;UBERON:0004921!1.02e-12!126;UBERON:0004185!1.02e-12!126;UBERON:0005409!4.17e-12!59;UBERON:0000160!1.09e-11!43;UBERON:0009569!1.49e-09!66;UBERON:0002100!2.09e-08!98;UBERON:0000344!3.72e-08!15;UBERON:0005256!5.64e-08!47;UBERON:0001242!3.81e-07!13;UBERON:0000060!3.81e-07!13;UBERON:0001262!3.81e-07!13;UBERON:0004786!3.81e-07!13;UBERON:0005177!4.42e-07!85;UBERON:0005172!4.99e-07!49;UBERON:0005173!4.99e-07!49;UBERON:0002417!4.99e-07!49;UBERON:0000916!4.99e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.19e-14,31;UBERON:0004119,4.81e-14,118;UBERON:0000925,4.81e-14,118;UBERON:0006595,4.81e-14,118;UBERON:0001007,7.02e-14,116;UBERON:0001555,7.02e-14,116;UBERON:0007026,7.02e-14,116;UBERON:0005409,2.32e-13,47;UBERON:0004921,6.21e-13,114;UBERON:0002100,3.46e-11,90;UBERON:0009569,1.41e-09,66;UBERON:0005256,3.16e-09,45;UBERON:0005177,4.46e-09,79;UBERON:0000344,1.53e-08,15;UBERON:0003104,5.57e-08,61;UBERON:0009142,5.57e-08,61;UBERON:0001242,1.79e-07,13;UBERON:0001262,1.79e-07,13;UBERON:0004786,1.79e-07,13;UBERON:0005172,3.84e-07,49;UBERON:0005173,3.84e-07,49;UBERON:0002417,3.84e-07,49;UBERON:0000916,3.84e-07,49;UBERON:0009854,8.47e-07,23;UBERON:0009856,8.47e-07,23 | |||
|phase1_expression=0.80074423552397,14.3079917132138,14.1049764210756,9.37639055051173,9.01612313903425,4.70061961353291,2.80335168714631,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0,0,0.137114433605739,0,1.02051948181284,0.198581902401771,0,5.59973479776923,5.50582274561208,12.0588712464154,7.32295393470427,7.75696437669201,4.94060890586572,7.05684363327806,10.199603490144,0,0,0,1.73310971850765,4.3221007793208,2.04169356262369,2.09265815368454,4.6880120671428,2.09409497589519,1.76469446409304,0.683045484958446,3.39857247121808,2.14024590558481,3.34543873024398,3.67093504323363,12.5182615095686,1.52617609466313,2.19686182734472,1.94429899074283,2.09979632438044,1.43752564364972,0,0,0,3.8588915405392,4.01146815914259,2.06268836910977,0,0,0,7.79342423759004,3.55717918444456,6.29929802096979,3.9554654502679,4.9733608046227,3.29560121570245,3.84218305321555,0.207379224616955,0,0.210324961351382,0,0.662605622854841,0.244981598429908,0.287536413054709,0,0,0.127687338085188,0,0.131886287730194,0.274462930807229,0,0.279182999001381,0,0,0,0.284743361598206,0.372798891650601,1.81742863999642,1.36028808192214,2.02905142091174,6.88339101585109,4.0798280022465,4.85732872474035,2.59910566979068,2.68816132258401,3.23022166303029,5.79463096765396,3.37721805983729,4.94675404314476,0.563373679106722,5.13305909657271,0,0,1.08245520505607,2.02687892380079,2.02209778005913,4.5673551887624,0.258937883647172,1.03909497345377,1.73485326766136,2.13125834818499,1.61430848079241,2.11011696773672,2.93971767839262,2.63899841792318,3.21353458054686,1.01219549843938,0,1.61766849947409,0.441683036920787,0.969750506270444,5.59175283654366,0,0.209446706813455,6.64188343542338,0.718890747035522,1.79970819298022,1.27070227073065,0.149790639404823,0,0.376963056338593,0,0.255715457330331,0.41557608911912,0,1.93494791315601,1.99051152976149,2.52722758433675,0.631325567659422,0.520481771850815,1.37941262660084,0.900310649026746,0.90422890701429,0.612328492361951,0.896796041993948,0.749613796477831,0,0.862271971731369,0.378212160335639,0.879755620819744,1.31517439456545,0.278047249225598,1.74126083261083,1.23469281844766,0.995171334092466,0,1.28673953557358,2.27330799516474,1.44988040774851,1.40715635988658,0.720248245844059,1.42046841351126,0.590292695242212,0.771335564436891,0.465067889500816,0.536546802799238,1.86824547787471,1.31647879930784,1.31333971263276,1.29710095273369,0.438599962275997,0.658650345873152,1.07365135008297,0.841159794256509,0.411618449517138,8.92130714056255,11.9002754998595,1.2797295032114,0.464473343720877,2.57734922644187,5.24377164020691,3.55804870151792,4.56541502670142,9.01605216934572,8.23494773620054,8.29406189040889,5.37182474511107,4.874102177978,7.19055526923377,5.18731319699266,6.96994456390285,3.41402221715547,1.71372768914593,2.25415471346161,1.22190796707189,2.13347735884388,2.24434623649019,2.40298841072178,1.62371162777562,3.1399745568275,3.08492909804501,8.00422093135302,1.33476084572875,1.57247196090562,1.79889689907883,1.01430060694251,2.65294875727659,1.78238096246994,1.43848068725405,1.62135226775035,5.49122826376163,5.75072826109418,4.09355042435354,6.55279113540577,5.80931419278357,6.09951205974501,7.71909634181387,3.32555742299888,0.947457058852424,1.30371981153621,2.20668611507745,1.87752198630802,2.51259386162724,3.09456733151818,3.90267295715598,2.52216230569906,2.6575762757853,4.30527875375215,2.62181303545181,3.62638461918381,3.47157740595628,0,1.63171705145613,0.983528546038072,0.827810238914197,0.160550589987792,0.234423373184406,2.62295912602681,0.504941854408746,0.315508219416257,1.95219372148319,2.15423397732799,2.62865677747807,1.78238939265915,2.54768877709949,2.02405350837447,2.33804686329049,1.58115111178609,0.321321316421807,2.98074178937364,1.78065603667255,1.46598263418218,2.47455184458803,1.32745138339963,0.971122544619926,0.604647113929502,0.754420319023592,1.18120757152309,2.76691633149535,3.10113951801865,1.45413491791002,2.13898427030833,1.58018378967908,1.05418608574999,3.09406629744561,1.02131881726136,0.36012218806262,1.29358683782755,1.50035924522115,1.24138163549592,0.891844088010353,0.987294123612726,3.04464949114599,2.11204537257339,1.48282449604674,0.220528398054962,1.15420377059036,1.77610869365496,1.26657142349127,1.90995750405018,2.1338316966858,6.70405924248657,0.370850604021019,0.683483523191411,2.47664241555867,1.85194527369712,1.13021074202815,0.546776910884101,1.60144721244566,0.509935289981566,0.559805809294632,1.79659965945751,5.72802370809068,0.790839983952838,0.609958401380546,2.37611749807963,2.92723614420256,2.62035076495413,4.18079473792944,4.3806331534428,2.35580347785627,3.88844919875379,1.24267862617385,0,1.04661582230785,1.65458490457098,0.583353565032143,1.93739735216597,0,0.821500670520278,1.3020438484395,0.314578033277133,0.483168241652012,0.288030006257865,1.26404448251271,2.8381530140623,1.33524244314275,0.909445760844565,1.43221356533985,0.79472541912506,0.600977247599844,1.03382669022204,0.504832249740738,0.685861259894999,0.5041309256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| |||
|short_description=p3@Ltbr | |||
}} |
Revision as of 08:55, 14 September 2013
Short description: | p3@Ltbr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ltbr_5end |
Coexpression cluster: | MCL_coexpression_mm9:436 |
Association with transcript: | 33bp_to_NM_010736, uc009duj.1_5end |
EntrezGene: | Ltbr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.19e-14 | 31 |
endoderm-derived structure | 4.81e-14 | 118 |
endoderm | 4.81e-14 | 118 |
presumptive endoderm | 4.81e-14 | 118 |
digestive system | 7.02e-14 | 116 |
digestive tract | 7.02e-14 | 116 |
primitive gut | 7.02e-14 | 116 |
gastrointestinal system | 2.32e-13 | 47 |
subdivision of digestive tract | 6.21e-13 | 114 |
trunk | 3.46e-11 | 90 |
subdivision of trunk | 1.41e-09 | 66 |
trunk mesenchyme | 3.16e-09 | 45 |
trunk region element | 4.46e-09 | 79 |
mucosa | 1.53e-08 | 15 |
mesenchyme | 5.57e-08 | 61 |
entire embryonic mesenchyme | 5.57e-08 | 61 |
intestinal mucosa | 1.79e-07 | 13 |
wall of intestine | 1.79e-07 | 13 |
gastrointestinal system mucosa | 1.79e-07 | 13 |
abdomen element | 3.84e-07 | 49 |
abdominal segment element | 3.84e-07 | 49 |
abdominal segment of trunk | 3.84e-07 | 49 |
abdomen | 3.84e-07 | 49 |
digestive tract diverticulum | 8.47e-07 | 23 |
sac | 8.47e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.