FFCP PHASE1:Mm9::chr12:111724389..111724400,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:111724389..111724400,-|id=chr12:111724389..111724400,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000945,4.10e-08,1;CL:0000236,4.10e-08,1;CL:0000826,4.10e-08,1;CL:0000815,6.57e-08,1;CL:0000792,6.57e-08,1;CL:0000355,1.38e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.30e-21,3;DOID:4045,1.30e-21,3;DOID:0050686,4.04e-11,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.38e-07,9;UBERON:0002036,1.38e-07,9;UBERON:0002385,1.38e-07,9;UBERON:0000486,1.38e-07,9;UBERON:0007503,1.38e-07,9;UBERON:0001015,1.38e-07,9;UBERON:0002329,1.38e-07,9;UBERON:0003082,1.38e-07,9;UBERON:0003059,1.38e-07,9;UBERON:0007282,1.38e-07,9;UBERON:0004290,1.38e-07,9;UBERON:0009618,1.38e-07,9;UBERON:0000383,7.08e-07,10|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.29123323441576,0.84473233291,0.468129052643987,0,0.159544317990673,0.513602189793617,1.04904482902797,0,0,0,0.315462165358238,0,1.27316895539409,0.0850432901510698,0.198581902401771,0.522399578277871,0,0,0,0,0,0,0,0.221730510655305,0,0.61506478758457,0,0,0.498703936075477,0.408338712524738,1.67412652294763,1.5626706890476,1.57057123192139,9.41170380849623,1.36609096991689,2.91306211818692,0,0.101376931219515,0,0,0.218025156380447,0,0,0.139986421625363,0,1.51004345451963,0,0.336093799142464,0.257259436035947,0.286533439938757,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.0914876436024097,0,0,0,0,0,0,0.372798891650601,0.075726193333184,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0.258937883647172,0,0,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,1.55759661857696,0,0.508280908292259,0.149790639404823,0,0.251308704225729,0,0.255715457330331,0,0.162241263067758,0.101839363850316,0.248813941220186,0.252722758433675,0,0,0.229902104433473,0,0.30140963567143,0,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0,0,0.257347907114715,0.852490498186778,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0,0,0.162137619091711,0,0,0.134206418760372,0.210289948564127,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0,0.228497025219458,0,0,0.387904974335251,0,0.0632365371242573,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0.221464689648775,0,0.327726629431476,0,0.289298117163023,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,1.03135543248187,0.340439605753788,0,0.129358683782755,0.857348140126369,0,0.178368817602071,0,0.304464949114599,0,0,0,0.16488625294148,0.484393280087717,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0,0,0.228778173206523,0.339956859987711,0.979660166265606,0.829199842826543,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0,0.0826534557253359,0.523511883968059,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0.25984164595559,0.358053391334963,0.39736270956253,0.360586348559907,0,0.908698049533329,0.304827226619999,0.604957110821043,0.292373642219257,0.481059208201647,1.40252282617883,0,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0.256100609619477,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0.263069711437843,0,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr12:111724389..111724400,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:111724389..111724400,- | |||
|id=chr12:111724389..111724400,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.10e-08,1;CL:0000236,4.10e-08,1;CL:0000826,4.10e-08,1;CL:0000815,6.57e-08,1;CL:0000792,6.57e-08,1;CL:0000355,1.38e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.30e-21,3;DOID:4045,1.30e-21,3;DOID:0050686,4.04e-11,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.38e-07,9;UBERON:0002036,1.38e-07,9;UBERON:0002385,1.38e-07,9;UBERON:0000486,1.38e-07,9;UBERON:0007503,1.38e-07,9;UBERON:0001015,1.38e-07,9;UBERON:0002329,1.38e-07,9;UBERON:0003082,1.38e-07,9;UBERON:0003059,1.38e-07,9;UBERON:0007282,1.38e-07,9;UBERON:0004290,1.38e-07,9;UBERON:0009618,1.38e-07,9;UBERON:0000383,7.08e-07,10 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.29123323441576,0.84473233291,0.468129052643987,0,0.159544317990673,0.513602189793617,1.04904482902797,0,0,0,0.315462165358238,0,1.27316895539409,0.0850432901510698,0.198581902401771,0.522399578277871,0,0,0,0,0,0,0,0.221730510655305,0,0.61506478758457,0,0,0.498703936075477,0.408338712524738,1.67412652294763,1.5626706890476,1.57057123192139,9.41170380849623,1.36609096991689,2.91306211818692,0,0.101376931219515,0,0,0.218025156380447,0,0,0.139986421625363,0,1.51004345451963,0,0.336093799142464,0.257259436035947,0.286533439938757,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.0914876436024097,0,0,0,0,0,0,0.372798891650601,0.075726193333184,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0.258937883647172,0,0,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,1.55759661857696,0,0.508280908292259,0.149790639404823,0,0.251308704225729,0,0.255715457330331,0,0.162241263067758,0.101839363850316,0.248813941220186,0.252722758433675,0,0,0.229902104433473,0,0.30140963567143,0,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0,0,0.257347907114715,0.852490498186778,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0,0,0.162137619091711,0,0,0.134206418760372,0.210289948564127,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0,0.228497025219458,0,0,0.387904974335251,0,0.0632365371242573,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0.221464689648775,0,0.327726629431476,0,0.289298117163023,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,1.03135543248187,0.340439605753788,0,0.129358683782755,0.857348140126369,0,0.178368817602071,0,0.304464949114599,0,0,0,0.16488625294148,0.484393280087717,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0,0,0.228778173206523,0.339956859987711,0.979660166265606,0.829199842826543,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0,0.0826534557253359,0.523511883968059,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0.25984164595559,0.358053391334963,0.39736270956253,0.360586348559907,0,0.908698049533329,0.304827226619999,0.604957110821043,0.292373642219257,0.481059208201647,1.40252282617883,0,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0.256100609619477,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0.263069711437843,0,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr12:111724389..111724400,- | |||
}} |
Revision as of 22:17, 12 September 2013
Short description: | p@chr12:111724389..111724400, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:111724389..111724400, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.10e-08 | 1 |
B cell | 4.10e-08 | 1 |
pro-B cell | 4.10e-08 | 1 |
regulatory T cell | 6.57e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.57e-08 | 1 |
multi-potent skeletal muscle stem cell | 1.38e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.38e-07 | 9 |
striated muscle tissue | 1.38e-07 | 9 |
muscle tissue | 1.38e-07 | 9 |
multilaminar epithelium | 1.38e-07 | 9 |
epithelial vesicle | 1.38e-07 | 9 |
musculature | 1.38e-07 | 9 |
somite | 1.38e-07 | 9 |
myotome | 1.38e-07 | 9 |
presomitic mesoderm | 1.38e-07 | 9 |
presumptive segmental plate | 1.38e-07 | 9 |
dermomyotome | 1.38e-07 | 9 |
trunk paraxial mesoderm | 1.38e-07 | 9 |
musculature of body | 7.08e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.30e-21 | 3 |
muscle cancer | 1.30e-21 | 3 |
organ system cancer | 4.04e-11 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.