FFCP PHASE1:Mm9::chr5:124545758..124545829,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56325|HGNC=|MCL_coexpression_id=240|UniProt=Q9JJ59,D6RFD9|association_with_transcript=0bp_to_ENSMUST00000031354,ENSMUST00000126970,NM_019875,uc008zou.1,uc008zow.1_5end|description=CAGE_peak_1_at_Abcb9_5end|id=chr5:124545758..124545829,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.35e-10!52;UBERON:0005068!1.35e-10!52;UBERON:0006241!1.35e-10!52;UBERON:0007135!1.35e-10!52;UBERON:0000955!9.67e-10!50;UBERON:0006238!9.67e-10!50;UBERON:0002616!2.44e-09!49;UBERON:0001017!4.84e-09!73;UBERON:0005743!4.84e-09!73;UBERON:0000073!1.71e-08!75;UBERON:0001016!1.71e-08!75;UBERON:0002020!3.89e-08!34;UBERON:0007023!8.05e-08!51;UBERON:0002021!8.60e-08!10;UBERON:0000411!8.60e-08!10;UBERON:0001950!8.60e-08!10;UBERON:0000033!5.31e-07!63;UBERON:0003076!6.18e-07!12;UBERON:0003057!6.18e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.38e-11,54;UBERON:0001049,1.39e-10,52;UBERON:0005068,1.39e-10,52;UBERON:0006241,1.39e-10,52;UBERON:0007135,1.39e-10,52;UBERON:0001017,4.54e-09,73;UBERON:0001016,1.62e-08,75;UBERON:0002020,2.14e-08,34;UBERON:0000955,2.78e-08,47;UBERON:0006238,2.78e-08,47;UBERON:0007023,5.82e-08,51;UBERON:0002616,6.73e-08,46;UBERON:0002021,7.13e-08,10;UBERON:0000411,7.13e-08,10;UBERON:0001950,7.13e-08,10;UBERON:0002346,1.69e-07,64;UBERON:0003075,1.69e-07,64;UBERON:0007284,1.69e-07,64;UBERON:0010371,3.94e-07,73;UBERON:0004121,4.31e-07,95;UBERON:0000924,4.31e-07,95;UBERON:0006601,4.31e-07,95;UBERON:0003076,5.25e-07,12;UBERON:0003057,5.25e-07,12|phase1_expression=2.5623815536767,27.2200817958702,23.6599604482559,48.6967380203996,57.1021132138836,6.04365378882803,5.13947809310157,0.516493293766305,0.422366166455,0.70219357896598,0,0.0797721589953364,0.171200729931206,0.786783621770977,9.66018309265422,13.1608923803387,22.3859801001007,0.473193248037357,0.274228867211478,1.27316895539409,7.90902598404949,0.297872853602656,0,4.95976510659561,5.04700418347774,13.7815671387605,10.7690499039769,7.75696437669201,4.3705386474966,5.04060259519861,1.99557459589774,24.131165591466,17.8368788399525,0,2.02196133825892,0.997407872150954,0.408338712524738,2.92972141515835,0.7813353445238,1.57057123192139,0.588231488031014,2.04913645487534,0,2.01434908760924,2.63580021170738,1.46837401729345,17.2126095756569,5.45062890951116,7.46933021297204,6.22175677037707,5.17949760013841,0,2.34895648480831,5.07753499407941,3.02484419228218,2.57259436035947,1.71920063963254,1.54701627683233,6.67644320836673,8.46385566835253,14.5781222806421,5.76035704517525,7.11435836888911,1.7997994345628,2.96659908770092,4.2628806896766,4.79360176829448,6.53171119046643,0.207379224616955,0.405017814995072,0.420649922702764,23.9946826899195,25.6207507503872,1.34739879136449,1.24599112323707,1.83843757322004,37.4393995397922,21.8345348125671,25.4986845205364,4.74790635828698,4.7573574673253,2.6045668527838,32.943593882163,16.3201156909187,19.7109739632085,25.0434297652618,18.9354335462807,10.6247684120421,1.13589289999776,2.04043212288321,4.92769630792852,1.72084775396277,0,1.61910957491345,5.84798775702902,1.79210754838934,4.35377702408431,1.1930122580464,0.259786004602869,0.70667914902068,2.11265129665021,3.84979432242953,0,7.11066703153331,0,0.506719730950197,0.505524445014783,4.45317130904334,0.258937883647172,6.53145411885229,1.04091196059682,2.43572382649713,2.53677046981664,2.11011696773672,1.41106448562846,4.02133092254962,7.66304399976559,13.013942122792,10.6153266233985,2.26473589926373,5.52103796150984,5.33362778448744,9.31958806090611,11.1256702864388,15.4990563041957,11.7510245395952,0.359445373517761,0.599902730993408,0.254140454146129,34.601637702514,43.4625572677695,10.5549655774806,29.550134432687,31.1972857943003,26.5968697036237,29.5279098783319,0.81471491080253,8.33526703087623,5.05445516867349,6.10281382070775,0,0.459804208866946,1.26043490863744,1.20563854268572,1.97305847538851,1.15302348256365,2.24884138943349,7.24369438069244,0.646703978798527,0.189106080167819,0.703804496655795,0.876782929710299,0.556094498451196,1.0447564995665,0.823128545631774,0,0,0,0,2.27838349789052,0.703578179943289,1.08037236876609,0.23674473558521,0.787056926989615,1.54267112887378,1.16266972375204,1.3413670069981,1.63471479314037,1.15191894939436,3.11918181750281,5.26947262048062,7.01759939641595,8.56245449635098,7.64976586934119,15.7717461423095,2.88132914661996,18.8338706300765,11.9002754998595,0.853153002140936,0.232236671860439,0.644337306610467,2.01683524623343,0.889512175379481,5.51654315726422,5.69434873853414,5.76446341534038,4.02136334080431,4.17808591286417,3.31438948102504,6.29173586057955,6.48414149624083,10.9527700289902,0.758671603812327,0.913988100877831,1.1270773567308,1.01825663922657,1.16371492300575,2.59502533594179,3.41477300470989,5.01874503130647,4.86696056308262,5.30607804863742,2.66807364378434,4.00428253718626,7.66580080941492,5.17182858485164,8.72298521970563,8.92355491083942,8.911904812349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| ||
|EntrezGene=56325 | |||
|HGNC= | |||
|MCL_coexpression_id=240 | |||
|UniProt=Q9JJ59,D6RFD9 | |||
|association_with_transcript=0bp_to_ENSMUST00000031354,ENSMUST00000126970,NM_019875,uc008zou.1,uc008zow.1_5end | |||
|description=CAGE_peak_1_at_Abcb9_5end | |||
|id=chr5:124545758..124545829,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.35e-10!52;UBERON:0005068!1.35e-10!52;UBERON:0006241!1.35e-10!52;UBERON:0007135!1.35e-10!52;UBERON:0000955!9.67e-10!50;UBERON:0006238!9.67e-10!50;UBERON:0002616!2.44e-09!49;UBERON:0001017!4.84e-09!73;UBERON:0005743!4.84e-09!73;UBERON:0000073!1.71e-08!75;UBERON:0001016!1.71e-08!75;UBERON:0002020!3.89e-08!34;UBERON:0007023!8.05e-08!51;UBERON:0002021!8.60e-08!10;UBERON:0000411!8.60e-08!10;UBERON:0001950!8.60e-08!10;UBERON:0000033!5.31e-07!63;UBERON:0003076!6.18e-07!12;UBERON:0003057!6.18e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.38e-11,54;UBERON:0001049,1.39e-10,52;UBERON:0005068,1.39e-10,52;UBERON:0006241,1.39e-10,52;UBERON:0007135,1.39e-10,52;UBERON:0001017,4.54e-09,73;UBERON:0001016,1.62e-08,75;UBERON:0002020,2.14e-08,34;UBERON:0000955,2.78e-08,47;UBERON:0006238,2.78e-08,47;UBERON:0007023,5.82e-08,51;UBERON:0002616,6.73e-08,46;UBERON:0002021,7.13e-08,10;UBERON:0000411,7.13e-08,10;UBERON:0001950,7.13e-08,10;UBERON:0002346,1.69e-07,64;UBERON:0003075,1.69e-07,64;UBERON:0007284,1.69e-07,64;UBERON:0010371,3.94e-07,73;UBERON:0004121,4.31e-07,95;UBERON:0000924,4.31e-07,95;UBERON:0006601,4.31e-07,95;UBERON:0003076,5.25e-07,12;UBERON:0003057,5.25e-07,12 | |||
|phase1_expression=2.5623815536767,27.2200817958702,23.6599604482559,48.6967380203996,57.1021132138836,6.04365378882803,5.13947809310157,0.516493293766305,0.422366166455,0.70219357896598,0,0.0797721589953364,0.171200729931206,0.786783621770977,9.66018309265422,13.1608923803387,22.3859801001007,0.473193248037357,0.274228867211478,1.27316895539409,7.90902598404949,0.297872853602656,0,4.95976510659561,5.04700418347774,13.7815671387605,10.7690499039769,7.75696437669201,4.3705386474966,5.04060259519861,1.99557459589774,24.131165591466,17.8368788399525,0,2.02196133825892,0.997407872150954,0.408338712524738,2.92972141515835,0.7813353445238,1.57057123192139,0.588231488031014,2.04913645487534,0,2.01434908760924,2.63580021170738,1.46837401729345,17.2126095756569,5.45062890951116,7.46933021297204,6.22175677037707,5.17949760013841,0,2.34895648480831,5.07753499407941,3.02484419228218,2.57259436035947,1.71920063963254,1.54701627683233,6.67644320836673,8.46385566835253,14.5781222806421,5.76035704517525,7.11435836888911,1.7997994345628,2.96659908770092,4.2628806896766,4.79360176829448,6.53171119046643,0.207379224616955,0.405017814995072,0.420649922702764,23.9946826899195,25.6207507503872,1.34739879136449,1.24599112323707,1.83843757322004,37.4393995397922,21.8345348125671,25.4986845205364,4.74790635828698,4.7573574673253,2.6045668527838,32.943593882163,16.3201156909187,19.7109739632085,25.0434297652618,18.9354335462807,10.6247684120421,1.13589289999776,2.04043212288321,4.92769630792852,1.72084775396277,0,1.61910957491345,5.84798775702902,1.79210754838934,4.35377702408431,1.1930122580464,0.259786004602869,0.70667914902068,2.11265129665021,3.84979432242953,0,7.11066703153331,0,0.506719730950197,0.505524445014783,4.45317130904334,0.258937883647172,6.53145411885229,1.04091196059682,2.43572382649713,2.53677046981664,2.11011696773672,1.41106448562846,4.02133092254962,7.66304399976559,13.013942122792,10.6153266233985,2.26473589926373,5.52103796150984,5.33362778448744,9.31958806090611,11.1256702864388,15.4990563041957,11.7510245395952,0.359445373517761,0.599902730993408,0.254140454146129,34.601637702514,43.4625572677695,10.5549655774806,29.550134432687,31.1972857943003,26.5968697036237,29.5279098783319,0.81471491080253,8.33526703087623,5.05445516867349,6.10281382070775,0,0.459804208866946,1.26043490863744,1.20563854268572,1.97305847538851,1.15302348256365,2.24884138943349,7.24369438069244,0.646703978798527,0.189106080167819,0.703804496655795,0.876782929710299,0.556094498451196,1.0447564995665,0.823128545631774,0,0,0,0,2.27838349789052,0.703578179943289,1.08037236876609,0.23674473558521,0.787056926989615,1.54267112887378,1.16266972375204,1.3413670069981,1.63471479314037,1.15191894939436,3.11918181750281,5.26947262048062,7.01759939641595,8.56245449635098,7.64976586934119,15.7717461423095,2.88132914661996,18.8338706300765,11.9002754998595,0.853153002140936,0.232236671860439,0.644337306610467,2.01683524623343,0.889512175379481,5.51654315726422,5.69434873853414,5.76446341534038,4.02136334080431,4.17808591286417,3.31438948102504,6.29173586057955,6.48414149624083,10.9527700289902,0.758671603812327,0.913988100877831,1.1270773567308,1.01825663922657,1.16371492300575,2.59502533594179,3.41477300470989,5.01874503130647,4.86696056308262,5.30607804863742,2.66807364378434,4.00428253718626,7.66580080941492,5.17182858485164,8.72298521970563,8.92355491083942,8.91190481234969,8.63088412352432,3.89124544260085,2.74561413188081,5.75072826109418,2.60498663367952,4.36852742360385,4.04126204715379,1.07638448113147,2.41221760681684,5.72734889516475,0,0.488894929326078,0.509235257325564,0.938760993154008,1.84256883185997,0.952174563544055,2.34160377429359,1.7339865851681,1.7717175171902,2.23236676120482,4.09658286789345,3.10832967358612,6.50920763616802,0,0.54390568381871,2.45882136509518,3.03530420935206,32.431219177534,29.8889800810118,0.819674726883377,6.31177318010932,1.57754109708128,2.34263246577983,2.36965737506079,0.716906393857656,0,0.566153061577665,1.21443210502468,1.16902343164525,0.790575555893047,15.7447445046685,1.27746076687442,1.42452482933804,1.95464351224291,3.29940245945071,10.619611067197,3.64170954232472,3.02323556964751,3.96070667487386,8.26845300066164,3.99665692327106,5.42699415653264,5.08947221268508,6.41695281092498,2.52829406348653,6.32511651449993,3.09406629744561,6.46835250932197,0.900305470156551,0.776152102696527,0.643011105094777,2.30542303734956,3.21063871683727,2.96188237083818,7.61162372786498,2.81606049676452,4.87213762986786,3.52845436887939,3.2977250588296,3.87514624070173,3.37752379597673,4.77489376012546,5.74493149107714,11.0762717919343,31.1514507377656,10.423123728669,1.44470807574256,4.07427960213366,20.3437933565066,12.4391747226133,16.0144721244566,0.509935289981566,0.419854356970974,1.52019971184866,16.2294005062569,0.474503990371703,0.813277868507395,2.26811215725783,2.50905955217362,5.24070152990826,5.66430254816247,5.86839535649885,17.799404054914,9.20266310371729,2.4853572523477,16.3470952218415,0,0.4963754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| |||
|short_description=p1@Abcb9 | |||
}} |
Revision as of 06:26, 14 September 2013
Short description: | p1@Abcb9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Abcb9_5end |
Coexpression cluster: | MCL_coexpression_mm9:240 |
Association with transcript: | 0bp_to_ENSMUST00000031354, ENSMUST00000126970, NM_019875, uc008zou.1, uc008zow.1_5end |
EntrezGene: | Abcb9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.38e-11 | 54 |
neural tube | 1.39e-10 | 52 |
neural rod | 1.39e-10 | 52 |
future spinal cord | 1.39e-10 | 52 |
neural keel | 1.39e-10 | 52 |
central nervous system | 4.54e-09 | 73 |
nervous system | 1.62e-08 | 75 |
gray matter | 2.14e-08 | 34 |
brain | 2.78e-08 | 47 |
future brain | 2.78e-08 | 47 |
adult organism | 5.82e-08 | 51 |
regional part of brain | 6.73e-08 | 46 |
occipital lobe | 7.13e-08 | 10 |
visual cortex | 7.13e-08 | 10 |
neocortex | 7.13e-08 | 10 |
neurectoderm | 1.69e-07 | 64 |
neural plate | 1.69e-07 | 64 |
presumptive neural plate | 1.69e-07 | 64 |
ecto-epithelium | 3.94e-07 | 73 |
ectoderm-derived structure | 4.31e-07 | 95 |
ectoderm | 4.31e-07 | 95 |
presumptive ectoderm | 4.31e-07 | 95 |
posterior neural tube | 5.25e-07 | 12 |
chordal neural plate | 5.25e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.