FFCP PHASE1:Mm9::chr9:60181894..60181932,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=312|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:60181894..60181932,+|id=chr9:60181894..60181932,+|ontology_enrichment_celltype=CL:0002563!2.42e-10!9;CL:0002251!2.42e-10!9;CL:0000239!1.02e-09!6;CL:0000677!1.02e-09!6;CL:0000212!1.02e-09!6;CL:0000584!1.02e-09!6;CL:0000075!3.38e-08!7|ontology_enrichment_celltype_v019_2=CL:0000682,1.44e-10,3;CL:0000239,1.24e-09,6;CL:0000677,1.24e-09,6;CL:0000584,1.24e-09,6;CL:0000075,2.88e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.82e-23!43;UBERON:0005409!9.40e-19!59;UBERON:0000344!4.22e-18!15;UBERON:0001242!1.70e-15!13;UBERON:0000060!1.70e-15!13;UBERON:0001262!1.70e-15!13;UBERON:0004786!1.70e-15!13;UBERON:0003350!2.42e-10!9;UBERON:0004808!2.42e-10!9;UBERON:0001277!2.42e-10!9;UBERON:0004923!6.02e-10!24;UBERON:0000485!3.57e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.70e-34,31;UBERON:0005409,1.40e-26,47;UBERON:0004921,1.07e-08,114;UBERON:0001007,1.76e-08,116;UBERON:0001555,1.76e-08,116;UBERON:0007026,1.76e-08,116;UBERON:0004119,2.85e-08,118;UBERON:0000925,2.85e-08,118;UBERON:0006595,2.85e-08,118;UBERON:0001242,9.63e-07,13;UBERON:0001262,9.63e-07,13;UBERON:0004786,9.63e-07,13|phase1_expression=0,6.2815573375085,3.63999391511629,5.74682001482977,7.01254021924886,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.45881856213434,5.7423196411502,1.7230479846363,1.939241094173,0.380046838912748,0.756090389279792,0.221730510655305,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4859645449955,1.85115396664481,0,0,0,0.403367049246685,1.55664630691409,5.89699440948933,7.59246498471219,18.2815839743652,10.0534083520108,12.9321706826748,9.55324026883689,1.79763881730844,6.48414149624083,5.97423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9101375701962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09181281873089,0,0.0826534557253359,0,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735374033800057,0,0.412070114477788,0.320919209591815,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.423073039458382,0.548783918618318,0.263069711437843,0,0,0,0.394017929502254,0,0.309873682371932,0,0,0.467863216890817,1.50409737833809,0,0,0|short_description=p@chr9:60181894..60181932,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=312 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:60181894..60181932,+ | |||
|id=chr9:60181894..60181932,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.42e-10!9;CL:0002251!2.42e-10!9;CL:0000239!1.02e-09!6;CL:0000677!1.02e-09!6;CL:0000212!1.02e-09!6;CL:0000584!1.02e-09!6;CL:0000075!3.38e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.44e-10,3;CL:0000239,1.24e-09,6;CL:0000677,1.24e-09,6;CL:0000584,1.24e-09,6;CL:0000075,2.88e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.82e-23!43;UBERON:0005409!9.40e-19!59;UBERON:0000344!4.22e-18!15;UBERON:0001242!1.70e-15!13;UBERON:0000060!1.70e-15!13;UBERON:0001262!1.70e-15!13;UBERON:0004786!1.70e-15!13;UBERON:0003350!2.42e-10!9;UBERON:0004808!2.42e-10!9;UBERON:0001277!2.42e-10!9;UBERON:0004923!6.02e-10!24;UBERON:0000485!3.57e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.70e-34,31;UBERON:0005409,1.40e-26,47;UBERON:0004921,1.07e-08,114;UBERON:0001007,1.76e-08,116;UBERON:0001555,1.76e-08,116;UBERON:0007026,1.76e-08,116;UBERON:0004119,2.85e-08,118;UBERON:0000925,2.85e-08,118;UBERON:0006595,2.85e-08,118;UBERON:0001242,9.63e-07,13;UBERON:0001262,9.63e-07,13;UBERON:0004786,9.63e-07,13 | |||
|phase1_expression=0,6.2815573375085,3.63999391511629,5.74682001482977,7.01254021924886,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.45881856213434,5.7423196411502,1.7230479846363,1.939241094173,0.380046838912748,0.756090389279792,0.221730510655305,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4859645449955,1.85115396664481,0,0,0,0.403367049246685,1.55664630691409,5.89699440948933,7.59246498471219,18.2815839743652,10.0534083520108,12.9321706826748,9.55324026883689,1.79763881730844,6.48414149624083,5.97423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9101375701962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09181281873089,0,0.0826534557253359,0,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735374033800057,0,0.412070114477788,0.320919209591815,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.423073039458382,0.548783918618318,0.263069711437843,0,0,0,0.394017929502254,0,0.309873682371932,0,0,0.467863216890817,1.50409737833809,0,0,0 | |||
|short_description=p@chr9:60181894..60181932,+ | |||
}} |
Revision as of 18:25, 14 September 2013
Short description: | p@chr9:60181894..60181932, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:60181894..60181932, + |
Coexpression cluster: | MCL_coexpression_mm9:312 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.44e-10 | 3 |
brush border epithelial cell | 1.24e-09 | 6 |
gut absorptive cell | 1.24e-09 | 6 |
enterocyte | 1.24e-09 | 6 |
columnar/cuboidal epithelial cell | 2.88e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.70e-34 | 31 |
gastrointestinal system | 1.40e-26 | 47 |
subdivision of digestive tract | 1.07e-08 | 114 |
digestive system | 1.76e-08 | 116 |
digestive tract | 1.76e-08 | 116 |
primitive gut | 1.76e-08 | 116 |
endoderm-derived structure | 2.85e-08 | 118 |
endoderm | 2.85e-08 | 118 |
presumptive endoderm | 2.85e-08 | 118 |
intestinal mucosa | 9.63e-07 | 13 |
wall of intestine | 9.63e-07 | 13 |
gastrointestinal system mucosa | 9.63e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.