FFCP PHASE1:Mm9::chr11:98064472..98064487,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=318|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:98064472..98064487,-|id=chr11:98064472..98064487,-|ontology_enrichment_celltype=CL:0000063!3.18e-11!66;CL:0000988!5.91e-08!32;CL:0002032!5.91e-08!32;CL:0000037!5.91e-08!32;CL:0000566!5.91e-08!32;CL:0000837!5.91e-08!32;CL:0000144!7.97e-08!121;CL:0000012!7.97e-08!121;CL:0002320!1.52e-07!46;CL:0000134!1.52e-07!46;CL:0000219!1.55e-07!54;CL:0000738!4.52e-07!17;CL:0002087!4.52e-07!17;CL:0000542!7.41e-07!13;CL:0000051!7.41e-07!13;CL:0002371!8.19e-07!118|ontology_enrichment_celltype_v019_2=CL:0000988,1.50e-08,32;CL:0002032,1.50e-08,32;CL:0000037,1.50e-08,32;CL:0000837,1.50e-08,32;CL:0002320,4.99e-08,46;CL:0000134,4.99e-08,46;CL:0000542,2.69e-07,13;CL:0000051,2.69e-07,13;CL:0000738,3.15e-07,17;CL:0002087,3.15e-07,17;CL:0000219,3.83e-07,54;CL:0000838,6.13e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.52e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.99e-08,46;UBERON:0000485,5.03e-07,11|phase1_expression=2.24208385946712,4.18770489167233,4.54999239389536,3.93203474698879,4.00716583957078,5.37213670118047,1.86890112476421,5.16493293766305,14.782815825925,14.0438715793196,3.93801326918661,2.23362045186942,3.76641605848653,3.4093956943409,0.666219523631325,0.404950534779652,0.699561878128147,2.99689057090326,1.91960207048034,1.69755860719212,1.61582251287033,2.58156473122302,1.30599894569468,0.799962113967033,1.60586496747019,2.29692785646008,1.29228598847722,1.50829862880122,0.570070258369122,0,0.443461021310609,1.27006134691926,3.07532393792285,0,4.91047753577167,1.99481574430191,10.2084678131185,4.18531630736908,5.4693474116666,2.09409497589519,18.8234076169925,10.9287277593351,5.82612423637384,4.78407908307194,4.35920804243913,2.9367480345869,6.25913075478431,0.872100625521786,1.97717564461025,0.972149495371417,0.979904951377538,2.87505128729943,2.68452169692378,2.90144856804538,2.35265659399725,1.28629718017973,2.0057340795713,0,0.606949382578793,0.528990979272033,0,2.03306719241479,0.889294796111139,1.7997994345628,4.94433181283487,2.1314403448383,0.898800331555214,2.30530983192933,0.725827286159344,0.945041568321835,0.630974884054146,0.571301968807607,1.10434270475807,0.857435594504678,0.862609239164127,0,1.10115880999389,0.127687338085188,0.153606533256243,0.527545150920775,0.182975287204819,0.52091337055676,0.558365998002762,2.25105044012672,0.45839474333043,1.17851434189467,0.284743361598206,0.745597783301202,0.984440513331393,1.058001841495,13.3337664802772,0.860423876981386,2.03991400112325,1.07940638327563,0,0.448026887097336,0.842666520790511,0.681721290312231,1.29893002301434,3.18005617059306,3.66192891419369,2.56652954828636,5.09610479413291,0,0.649473123033642,0.760079596425296,0.505524445014783,1.25602267690966,2.33044095282455,2.07818994690755,1.21439728736295,1.21786191324856,1.15307748628029,0.60289056221049,1.88141931417128,1.13099932196708,0.494389935468748,1.01219549843938,0.884610551949874,1.45590164952668,0,1.45462575940567,0,1.46390398505774,0.628340120440365,0.255457055208591,5.51149572727233,7.7987355029143,3.93917703926501,0.299581278809645,2.28750301409313,1.25654352112864,0.521472960576829,0.511430914660661,0.20778804455956,0.973447578406546,1.83310854930569,1.11966273549084,2.27450482590307,0.420883711772948,1.30120442962704,1.60931473103431,1.80062129805349,1.50704817835715,1.49680298132921,1.92170580427275,1.49922759295566,1.81092359517311,0.862271971731369,1.32374256117473,1.75951124163949,1.09597866213787,1.94633074457919,1.0447564995665,0,1.59227413454795,2.80885274925294,4.88961023517959,2.55747149456033,0.414251545071004,0.234526059981096,1.08037236876609,0.710234206755631,1.37734962223183,1.07986979021165,1.16266972375204,0.804820204198858,1.16765342367169,0.987359099480883,0.985004784474571,1.13496333364198,0.584799949701329,1.09775057645525,1.47627060636409,0.630869845692382,1.44066457330998,0.330418782983798,0.528901133327089,2.34617075588757,1.16118335930219,0.902072229254653,1.00841762311671,0.667134131534611,0.760902504450237,0.949058123089023,0.823494773620054,0.251335208800269,1.39269530428806,1.36474860983384,0.898819408654221,0.432276099749388,0.398282546508734,1.89667900953082,0.799739588268102,1.1270773567308,0.610953983535943,1.16371492300575,1.1221731182451,1.96033265085198,1.62371162777562,0.784993639206874,0.987177311374404,0.592905254174298,1.00107063429656,0,0.224862112384854,0.405720242777006,0.964708639009667,0.50925170356284,0.287696137450811,0.810676133875177,0,0,0.372140947668503,0.936113019343682,0.252578877947112,0.358794827043824,1.4473305640901,1.84753190166605,1.70542270593436,0.814824882210129,1.52770577197669,1.40814148973101,1.50755631697634,1.19021820443007,1.75620283072019,2.04925687338048,1.55025282754142,1.2756381492599,2.13022309130459,0.518054945597687,1.73578870297814,3.01582567878545,1.63171705145613,0,1.93155722413313,0.321101179975584,1.28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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=318 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:98064472..98064487,- | |||
|id=chr11:98064472..98064487,- | |||
|ontology_enrichment_celltype=CL:0000063!3.18e-11!66;CL:0000988!5.91e-08!32;CL:0002032!5.91e-08!32;CL:0000037!5.91e-08!32;CL:0000566!5.91e-08!32;CL:0000837!5.91e-08!32;CL:0000144!7.97e-08!121;CL:0000012!7.97e-08!121;CL:0002320!1.52e-07!46;CL:0000134!1.52e-07!46;CL:0000219!1.55e-07!54;CL:0000738!4.52e-07!17;CL:0002087!4.52e-07!17;CL:0000542!7.41e-07!13;CL:0000051!7.41e-07!13;CL:0002371!8.19e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.50e-08,32;CL:0002032,1.50e-08,32;CL:0000037,1.50e-08,32;CL:0000837,1.50e-08,32;CL:0002320,4.99e-08,46;CL:0000134,4.99e-08,46;CL:0000542,2.69e-07,13;CL:0000051,2.69e-07,13;CL:0000738,3.15e-07,17;CL:0002087,3.15e-07,17;CL:0000219,3.83e-07,54;CL:0000838,6.13e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.52e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.99e-08,46;UBERON:0000485,5.03e-07,11 | |||
|phase1_expression=2.24208385946712,4.18770489167233,4.54999239389536,3.93203474698879,4.00716583957078,5.37213670118047,1.86890112476421,5.16493293766305,14.782815825925,14.0438715793196,3.93801326918661,2.23362045186942,3.76641605848653,3.4093956943409,0.666219523631325,0.404950534779652,0.699561878128147,2.99689057090326,1.91960207048034,1.69755860719212,1.61582251287033,2.58156473122302,1.30599894569468,0.799962113967033,1.60586496747019,2.29692785646008,1.29228598847722,1.50829862880122,0.570070258369122,0,0.443461021310609,1.27006134691926,3.07532393792285,0,4.91047753577167,1.99481574430191,10.2084678131185,4.18531630736908,5.4693474116666,2.09409497589519,18.8234076169925,10.9287277593351,5.82612423637384,4.78407908307194,4.35920804243913,2.9367480345869,6.25913075478431,0.872100625521786,1.97717564461025,0.972149495371417,0.979904951377538,2.87505128729943,2.68452169692378,2.90144856804538,2.35265659399725,1.28629718017973,2.0057340795713,0,0.606949382578793,0.528990979272033,0,2.03306719241479,0.889294796111139,1.7997994345628,4.94433181283487,2.1314403448383,0.898800331555214,2.30530983192933,0.725827286159344,0.945041568321835,0.630974884054146,0.571301968807607,1.10434270475807,0.857435594504678,0.862609239164127,0,1.10115880999389,0.127687338085188,0.153606533256243,0.527545150920775,0.182975287204819,0.52091337055676,0.558365998002762,2.25105044012672,0.45839474333043,1.17851434189467,0.284743361598206,0.745597783301202,0.984440513331393,1.058001841495,13.3337664802772,0.860423876981386,2.03991400112325,1.07940638327563,0,0.448026887097336,0.842666520790511,0.681721290312231,1.29893002301434,3.18005617059306,3.66192891419369,2.56652954828636,5.09610479413291,0,0.649473123033642,0.760079596425296,0.505524445014783,1.25602267690966,2.33044095282455,2.07818994690755,1.21439728736295,1.21786191324856,1.15307748628029,0.60289056221049,1.88141931417128,1.13099932196708,0.494389935468748,1.01219549843938,0.884610551949874,1.45590164952668,0,1.45462575940567,0,1.46390398505774,0.628340120440365,0.255457055208591,5.51149572727233,7.7987355029143,3.93917703926501,0.299581278809645,2.28750301409313,1.25654352112864,0.521472960576829,0.511430914660661,0.20778804455956,0.973447578406546,1.83310854930569,1.11966273549084,2.27450482590307,0.420883711772948,1.30120442962704,1.60931473103431,1.80062129805349,1.50704817835715,1.49680298132921,1.92170580427275,1.49922759295566,1.81092359517311,0.862271971731369,1.32374256117473,1.75951124163949,1.09597866213787,1.94633074457919,1.0447564995665,0,1.59227413454795,2.80885274925294,4.88961023517959,2.55747149456033,0.414251545071004,0.234526059981096,1.08037236876609,0.710234206755631,1.37734962223183,1.07986979021165,1.16266972375204,0.804820204198858,1.16765342367169,0.987359099480883,0.985004784474571,1.13496333364198,0.584799949701329,1.09775057645525,1.47627060636409,0.630869845692382,1.44066457330998,0.330418782983798,0.528901133327089,2.34617075588757,1.16118335930219,0.902072229254653,1.00841762311671,0.667134131534611,0.760902504450237,0.949058123089023,0.823494773620054,0.251335208800269,1.39269530428806,1.36474860983384,0.898819408654221,0.432276099749388,0.398282546508734,1.89667900953082,0.799739588268102,1.1270773567308,0.610953983535943,1.16371492300575,1.1221731182451,1.96033265085198,1.62371162777562,0.784993639206874,0.987177311374404,0.592905254174298,1.00107063429656,0,0.224862112384854,0.405720242777006,0.964708639009667,0.50925170356284,0.287696137450811,0.810676133875177,0,0,0.372140947668503,0.936113019343682,0.252578877947112,0.358794827043824,1.4473305640901,1.84753190166605,1.70542270593436,0.814824882210129,1.52770577197669,1.40814148973101,1.50755631697634,1.19021820443007,1.75620283072019,2.04925687338048,1.55025282754142,1.2756381492599,2.13022309130459,0.518054945597687,1.73578870297814,3.01582567878545,1.63171705145613,0,1.93155722413313,0.321101179975584,1.28932855251423,0.491804836130026,0.504941854408746,3.15508219416257,1.56175497718655,1.50796378412959,2.62865677747807,2.67358408898873,2.54768877709949,2.02405350837447,1.16902343164525,1.18586333383957,1.92792789853084,1.84522110770749,1.42452482933804,2.60619134965722,0.989820737835213,1.32745138339963,2.18502572539483,0.302323556964751,0.565815239267694,0.295301892880773,0.922305443831782,2.06742634534577,0.727067458955011,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,2.38307724027652,1.62054984628179,1.4229455216103,1.28602221018955,1.06404140185364,1.60531935841864,0.987294123612726,3.65357938937519,0,0.63549621259146,1.54369878638473,3.95727007059552,1.77610869365496,1.32688434841943,0.238744688006273,0.164140899745061,1.7488850197791,1.29797711407357,1.36696704638282,2.06386867963222,0.555583582109135,0.565105371014073,0.27338845544205,0.915112692826091,4.24946074984638,3.21888340344413,3.45499934511059,0.954670618015114,2.53068794864908,1.42323626988794,1.51207477150522,0.836353184057875,1.09181281873089,0.944050424693745,0.578574190077352,0.78526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| |||
|short_description=p@chr11:98064472..98064487,- | |||
}} | |||
Revision as of 21:46, 12 September 2013
| Short description: | p@chr11:98064472..98064487, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr11:98064472..98064487, - |
| Coexpression cluster: | MCL_coexpression_mm9:318 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic cell | 1.50e-08 | 32 |
| hematopoietic oligopotent progenitor cell | 1.50e-08 | 32 |
| hematopoietic stem cell | 1.50e-08 | 32 |
| hematopoietic multipotent progenitor cell | 1.50e-08 | 32 |
| connective tissue cell | 4.99e-08 | 46 |
| mesenchymal cell | 4.99e-08 | 46 |
| lymphocyte | 2.69e-07 | 13 |
| common lymphoid progenitor | 2.69e-07 | 13 |
| leukocyte | 3.15e-07 | 17 |
| nongranular leukocyte | 3.15e-07 | 17 |
| motile cell | 3.83e-07 | 54 |
| lymphoid lineage restricted progenitor cell | 6.13e-07 | 12 |
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 4.99e-08 | 46 |
| simple columnar epithelium | 5.03e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
