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FFCP PHASE1:Mm9::chr11:78798449..78798459,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=16859|HGNC=|MCL_coexpression_id=56|UniProt=O08573|association_with_transcript=-1bp_to_ENSMUST00000108268_5end|description=CAGE_peak_3_at_Lgals9_5end|id=chr11:78798449..78798459,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!6.40e-15!130;UBERON:0000925!6.40e-15!130;UBERON:0006595!6.40e-15!130;UBERON:0001007!9.45e-14!128;UBERON:0001555!9.45e-14!128;UBERON:0007026!9.45e-14!128;UBERON:0004921!4.32e-13!126;UBERON:0004185!4.32e-13!126;UBERON:0000490!2.02e-09!66;UBERON:0003929!3.01e-09!55;UBERON:0005409!4.63e-09!59;UBERON:0009854!8.60e-09!23;UBERON:0009856!8.60e-09!23;UBERON:0005057!1.26e-08!51;UBERON:0002405!2.53e-08!70;UBERON:0002107!3.01e-08!22;UBERON:0007499!3.01e-08!22;UBERON:0006925!3.01e-08!22;UBERON:0009497!3.01e-08!22;UBERON:0000015!3.01e-08!22;UBERON:0002423!3.01e-08!22;UBERON:0006235!3.01e-08!22;UBERON:0008835!3.01e-08!22;UBERON:0003894!3.01e-08!22;UBERON:0004161!3.01e-08!22;UBERON:0008836!3.01e-08!22;UBERON:0002365!7.01e-08!25;UBERON:0002330!7.01e-08!25;UBERON:0005911!3.95e-07!69;UBERON:0000160!5.82e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.65e-18,118;UBERON:0000925,3.65e-18,118;UBERON:0006595,3.65e-18,118;UBERON:0001007,3.17e-16,116;UBERON:0001555,3.17e-16,116;UBERON:0007026,3.17e-16,116;UBERON:0004921,9.09e-16,114;UBERON:0005409,7.38e-12,47;UBERON:0000160,1.83e-11,31;UBERON:0000490,1.84e-11,66;UBERON:0003929,2.46e-10,55;UBERON:0009854,1.04e-08,23;UBERON:0009856,1.04e-08,23;UBERON:0002107,8.44e-08,22;UBERON:0007499,8.44e-08,22;UBERON:0006925,8.44e-08,22;UBERON:0009497,8.44e-08,22;UBERON:0000015,8.44e-08,22;UBERON:0002423,8.44e-08,22;UBERON:0006235,8.44e-08,22;UBERON:0008835,8.44e-08,22;UBERON:0003894,8.44e-08,22;UBERON:0004161,8.44e-08,22;UBERON:0008836,8.44e-08,22;UBERON:0005911,7.50e-07,69|phase1_expression=0,1.04692622291808,0,0.90739263392049,0.500895729946347,1.34303417529512,1.16806320297763,0.129123323441576,0,0,0,0.0797721589953364,0.171200729931206,0,0.333109761815663,0.607425802169478,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,0.198581902401771,0.261199789138935,0.639969691173627,1.37645568640302,0.57423196411502,0.86152399231815,1.50829862880122,0.760093677825496,1.26015064879965,0.886922042621219,1.27006134691926,1.23012957516914,0,0.577703239502549,1.32987716286794,0.816677425049476,2.51118978442145,3.906676722619,2.61761871986899,1.76469446409304,1.36609096991689,0.971020706062307,1.51076181570693,0.506884656097573,0.367093504323363,0.782391344348039,0,0,0.194429899074283,0.419959264876088,0,0,0.725362142011344,0,0.514518872071894,0,0,0.202316460859598,0,0,0,0,0.449949858640699,0.988866362566974,2.1314403448383,0.599200221036809,0.768436610643109,0,0,0,0.856952953211411,0.441737081903227,0.244981598429908,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0,0,0,0,0.284743361598206,0,0,0.151143120213571,0,0.860423876981386,0.679971333707751,1.07940638327563,1.29955283489534,1.34408066129201,0.702222100658759,0.340860645156116,0,0.70667914902068,0,0,0,0,0,0.253359865475099,0,0.45673551887624,0.517875767294343,0,0.520455980298408,0,0.230615497256059,0.150722640552623,0,0.125666591329675,1.23597483867187,0.289198713839823,0.884610551949874,0.485300549842228,0.220841518460394,0,1.86391761218122,0,0,1.78819938646014,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.497627882440372,0,0,0.130120442962704,0,0,0,0,0,0.187403449119458,0,0,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0.284163499395593,0.414251545071004,0.469052119962192,0.36012412292203,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.233530684734339,0,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0.402619256281115,0.210289948564127,0,1.32167513193519,2.3800550999719,0,0.232236671860439,0.515469845288373,1.21010114774006,1.33426826306922,4.37518940058886,0.949058123089023,3.29397909448022,2.01068167040216,3.97912944082302,1.9496408711912,6.29173586057955,1.72910439899755,0.796565093017469,0,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0.252946148497029,0.147610147979602,0.31399745568275,0,0.889357881261447,0.83422552858047,0.393117990226406,1.57403478669398,1.42002084971952,1.68824011826692,0.763877555344259,2.5892652370573,0.810676133875177,1.92192989231657,1.43768206527355,2.60498663367952,1.5601883655728,2.02063102357689,2.51156378930677,0.482443521363367,0.184753190166605,0,0,0,0,0.670025029767263,0,0.585400943573396,0.630540576424764,0.221464689648775,0.159454768657487,0.491589944147214,0.172684981865896,0.433947175744535,0,1.63171705145613,0.983528546038072,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0.395287777946524,0,0.141940085208269,0,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,1.22974059177571,2.06742634534577,0,0,0,0,1.03135543248187,0.340439605753788,0,0,0,0.532020700926821,0.356737635204141,0.164549020602121,0.304464949114599,20.4164386015428,7.62595455109753,0,0,0.322928853391811,0.241251699712623,0,0,2.33184669303881,0,1.02522528478712,0,1.29636169158798,0.376736914009382,0.956859594047176,0.457556346413045,0.339956859987711,0.139951452323658,0.138199973804424,3.81868247206045,0,0,0.756037385752609,0.627264888043406,0.87345025498471,2.15782954215713,1.65306911450672,1.57053565190418,0.518459893167171,0.621339313086926,0,0.299033092087958,0,0,0.516639293910924,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,1.89606672376907,0.608175645870493,0.821687657318618,1.55904987573354,1.43221356533985,1.39076948346885,1.20195449519969,1.9199638532695,1.31256384932592,2.057583779685,1.41156659191577,1.16949456887703,0.962118416403295,0.584384510907845,0,0.887943813496259,0.897138566094757,1.84673078000486,0,0.93841237725591,0.36630324853453,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.628839487883947,0,0.44449345560323,0.824140228955577,0.320919209591815,0.758091635291392,0,0,0.561849044819294,0.512201219238954,0.574354689556133,0.476293691283074,0.463537303779422,0.578727661391115,0.412085900803307,0,0,0.532427418478012,0.238436189947321,0.290692833264657,0.470546902076653,0.423073039458382,0.73171189149109,1.31534855718921,0.135804113845862,0,0.237270036248348,0.492522411877817,0,0.464810523557898,0.964533054905707,0,0.233931608445408,1.07435527024149,0.191288332068843,0,0|short_description=p3@Lgals9}}
|EntrezGene=16859
|HGNC=
|MCL_coexpression_id=56
|UniProt=O08573
|association_with_transcript=-1bp_to_ENSMUST00000108268_5end
|description=CAGE_peak_3_at_Lgals9_5end
|id=chr11:78798449..78798459,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!6.40e-15!130;UBERON:0000925!6.40e-15!130;UBERON:0006595!6.40e-15!130;UBERON:0001007!9.45e-14!128;UBERON:0001555!9.45e-14!128;UBERON:0007026!9.45e-14!128;UBERON:0004921!4.32e-13!126;UBERON:0004185!4.32e-13!126;UBERON:0000490!2.02e-09!66;UBERON:0003929!3.01e-09!55;UBERON:0005409!4.63e-09!59;UBERON:0009854!8.60e-09!23;UBERON:0009856!8.60e-09!23;UBERON:0005057!1.26e-08!51;UBERON:0002405!2.53e-08!70;UBERON:0002107!3.01e-08!22;UBERON:0007499!3.01e-08!22;UBERON:0006925!3.01e-08!22;UBERON:0009497!3.01e-08!22;UBERON:0000015!3.01e-08!22;UBERON:0002423!3.01e-08!22;UBERON:0006235!3.01e-08!22;UBERON:0008835!3.01e-08!22;UBERON:0003894!3.01e-08!22;UBERON:0004161!3.01e-08!22;UBERON:0008836!3.01e-08!22;UBERON:0002365!7.01e-08!25;UBERON:0002330!7.01e-08!25;UBERON:0005911!3.95e-07!69;UBERON:0000160!5.82e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.65e-18,118;UBERON:0000925,3.65e-18,118;UBERON:0006595,3.65e-18,118;UBERON:0001007,3.17e-16,116;UBERON:0001555,3.17e-16,116;UBERON:0007026,3.17e-16,116;UBERON:0004921,9.09e-16,114;UBERON:0005409,7.38e-12,47;UBERON:0000160,1.83e-11,31;UBERON:0000490,1.84e-11,66;UBERON:0003929,2.46e-10,55;UBERON:0009854,1.04e-08,23;UBERON:0009856,1.04e-08,23;UBERON:0002107,8.44e-08,22;UBERON:0007499,8.44e-08,22;UBERON:0006925,8.44e-08,22;UBERON:0009497,8.44e-08,22;UBERON:0000015,8.44e-08,22;UBERON:0002423,8.44e-08,22;UBERON:0006235,8.44e-08,22;UBERON:0008835,8.44e-08,22;UBERON:0003894,8.44e-08,22;UBERON:0004161,8.44e-08,22;UBERON:0008836,8.44e-08,22;UBERON:0005911,7.50e-07,69
|phase1_expression=0,1.04692622291808,0,0.90739263392049,0.500895729946347,1.34303417529512,1.16806320297763,0.129123323441576,0,0,0,0.0797721589953364,0.171200729931206,0,0.333109761815663,0.607425802169478,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,0.198581902401771,0.261199789138935,0.639969691173627,1.37645568640302,0.57423196411502,0.86152399231815,1.50829862880122,0.760093677825496,1.26015064879965,0.886922042621219,1.27006134691926,1.23012957516914,0,0.577703239502549,1.32987716286794,0.816677425049476,2.51118978442145,3.906676722619,2.61761871986899,1.76469446409304,1.36609096991689,0.971020706062307,1.51076181570693,0.506884656097573,0.367093504323363,0.782391344348039,0,0,0.194429899074283,0.419959264876088,0,0,0.725362142011344,0,0.514518872071894,0,0,0.202316460859598,0,0,0,0,0.449949858640699,0.988866362566974,2.1314403448383,0.599200221036809,0.768436610643109,0,0,0,0.856952953211411,0.441737081903227,0.244981598429908,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0,0,0,0,0.284743361598206,0,0,0.151143120213571,0,0.860423876981386,0.679971333707751,1.07940638327563,1.29955283489534,1.34408066129201,0.702222100658759,0.340860645156116,0,0.70667914902068,0,0,0,0,0,0.253359865475099,0,0.45673551887624,0.517875767294343,0,0.520455980298408,0,0.230615497256059,0.150722640552623,0,0.125666591329675,1.23597483867187,0.289198713839823,0.884610551949874,0.485300549842228,0.220841518460394,0,1.86391761218122,0,0,1.78819938646014,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.497627882440372,0,0,0.130120442962704,0,0,0,0,0,0.187403449119458,0,0,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0.284163499395593,0.414251545071004,0.469052119962192,0.36012412292203,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.233530684734339,0,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0.402619256281115,0.210289948564127,0,1.32167513193519,2.3800550999719,0,0.232236671860439,0.515469845288373,1.21010114774006,1.33426826306922,4.37518940058886,0.949058123089023,3.29397909448022,2.01068167040216,3.97912944082302,1.9496408711912,6.29173586057955,1.72910439899755,0.796565093017469,0,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0.252946148497029,0.147610147979602,0.31399745568275,0,0.889357881261447,0.83422552858047,0.393117990226406,1.57403478669398,1.42002084971952,1.68824011826692,0.763877555344259,2.5892652370573,0.810676133875177,1.92192989231657,1.43768206527355,2.60498663367952,1.5601883655728,2.02063102357689,2.51156378930677,0.482443521363367,0.184753190166605,0,0,0,0,0.670025029767263,0,0.585400943573396,0.630540576424764,0.221464689648775,0.159454768657487,0.491589944147214,0.172684981865896,0.433947175744535,0,1.63171705145613,0.983528546038072,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0.395287777946524,0,0.141940085208269,0,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,1.22974059177571,2.06742634534577,0,0,0,0,1.03135543248187,0.340439605753788,0,0,0,0.532020700926821,0.356737635204141,0.164549020602121,0.304464949114599,20.4164386015428,7.62595455109753,0,0,0.322928853391811,0.241251699712623,0,0,2.33184669303881,0,1.02522528478712,0,1.29636169158798,0.376736914009382,0.956859594047176,0.457556346413045,0.339956859987711,0.139951452323658,0.138199973804424,3.81868247206045,0,0,0.756037385752609,0.627264888043406,0.87345025498471,2.15782954215713,1.65306911450672,1.57053565190418,0.518459893167171,0.621339313086926,0,0.299033092087958,0,0,0.516639293910924,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,1.89606672376907,0.608175645870493,0.821687657318618,1.55904987573354,1.43221356533985,1.39076948346885,1.20195449519969,1.9199638532695,1.31256384932592,2.057583779685,1.41156659191577,1.16949456887703,0.962118416403295,0.584384510907845,0,0.887943813496259,0.897138566094757,1.84673078000486,0,0.93841237725591,0.36630324853453,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.628839487883947,0,0.44449345560323,0.824140228955577,0.320919209591815,0.758091635291392,0,0,0.561849044819294,0.512201219238954,0.574354689556133,0.476293691283074,0.463537303779422,0.578727661391115,0.412085900803307,0,0,0.532427418478012,0.238436189947321,0.290692833264657,0.470546902076653,0.423073039458382,0.73171189149109,1.31534855718921,0.135804113845862,0,0.237270036248348,0.492522411877817,0,0.464810523557898,0.964533054905707,0,0.233931608445408,1.07435527024149,0.191288332068843,0,0
|short_description=p3@Lgals9
}}

Revision as of 21:05, 12 September 2013

Short description:p3@Lgals9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Lgals9_5end
Coexpression cluster:MCL_coexpression_mm9:56
Association with transcript: -1bp_to_ENSMUST00000108268_5end
EntrezGene:Lgals9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Lgals9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F74.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H12.51
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I720.42
placenta, adult pregnant day17.CNhs10464.577-18G37.63
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D32.06
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure3.65e-18118
endoderm3.65e-18118
presumptive endoderm3.65e-18118
digestive system3.17e-16116
digestive tract3.17e-16116
primitive gut3.17e-16116
subdivision of digestive tract9.09e-16114
gastrointestinal system7.38e-1247
intestine1.83e-1131
unilaminar epithelium1.84e-1166
gut epithelium2.46e-1055
digestive tract diverticulum1.04e-0823
sac1.04e-0823
liver8.44e-0822
epithelial sac8.44e-0822
digestive gland8.44e-0822
epithelium of foregut-midgut junction8.44e-0822
anatomical boundary8.44e-0822
hepatobiliary system8.44e-0822
foregut-midgut junction8.44e-0822
hepatic diverticulum8.44e-0822
liver primordium8.44e-0822
septum transversum8.44e-0822
liver bud8.44e-0822
endo-epithelium7.50e-0769







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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