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FFCP PHASE1:Mm9::chr11:98219716..98219771,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=59045|HGNC=|MCL_coexpression_id=718|UniProt=|association_with_transcript=0bp_to_ENSMUST00000152559,ENSMUST00000154960,ENSMUST00000155063_5end|description=CAGE_peak_1_at_Stard3_5end|id=chr11:98219716..98219771,+|ontology_enrichment_celltype=CL:0002371!1.29e-12!118;CL:0000548!1.84e-11!115;CL:0000004!1.84e-11!115;CL:0000255!1.84e-11!115;CL:0000063!2.18e-11!66;CL:0000144!3.34e-11!121;CL:0000012!3.34e-11!121;CL:0000066!5.45e-09!25;CL:0000738!8.04e-08!17;CL:0002087!8.04e-08!17;CL:0000223!1.27e-07!20;CL:0002321!2.27e-07!70;CL:0000220!2.27e-07!70;CL:0002076!5.58e-07!15|ontology_enrichment_celltype_v019_2=CL:0000066,5.45e-09,25;CL:0000738,8.04e-08,17;CL:0002087,8.04e-08,17;CL:0000223,1.27e-07,20;CL:0002321,2.27e-07,70;CL:0002076,5.58e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.19e-11!130;UBERON:0000925!3.19e-11!130;UBERON:0006595!3.19e-11!130;UBERON:0001007!7.98e-11!128;UBERON:0001555!7.98e-11!128;UBERON:0007026!7.98e-11!128;UBERON:0004921!4.14e-10!126;UBERON:0004185!4.14e-10!126;UBERON:0001004!1.20e-09!42;UBERON:0000065!2.53e-09!41;UBERON:0005911!3.76e-09!69;UBERON:0000490!5.21e-08!66;UBERON:0000344!6.80e-08!15;UBERON:0001242!4.52e-07!13;UBERON:0000060!4.52e-07!13;UBERON:0001262!4.52e-07!13;UBERON:0004786!4.52e-07!13;UBERON:0000064!6.12e-07!99;UBERON:0000072!6.69e-07!27;UBERON:0003408!8.93e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.71e-13,118;UBERON:0000925,4.71e-13,118;UBERON:0006595,4.71e-13,118;UBERON:0001007,1.24e-12,116;UBERON:0001555,1.24e-12,116;UBERON:0007026,1.24e-12,116;UBERON:0004921,7.39e-12,114;UBERON:0011216,5.81e-11,194;UBERON:0001004,1.20e-09,42;UBERON:0000065,2.53e-09,41;UBERON:0005911,3.76e-09,69;UBERON:0000160,2.31e-08,31;UBERON:0000490,5.21e-08,66;UBERON:0000344,6.80e-08,15;UBERON:0001242,4.52e-07,13;UBERON:0001262,4.52e-07,13;UBERON:0004786,4.52e-07,13;UBERON:0000072,6.69e-07,27;UBERON:0003408,8.93e-07,24|phase1_expression=18.2569685699465,46.0647538083957,68.2498859084304,63.8199485857411,90.1612313903425,39.1158703554703,41.8166626665991,42.7398200591617,81.7982475701184,80.0500680021218,65.0628279256919,49.7778272130899,38.1777627746589,40.2133851127388,13.6575002344422,14.3757439846776,9.79386629379405,27.1297462208084,24.8177124826387,28.434106670468,20.8356060870121,36.7376519443276,43.8815645753411,35.9982951285165,41.9818984352921,50.5324128421218,43.0761996159075,43.5251890025496,55.2968150618048,43.3491823187081,50.3328259187542,17.7808588568697,16.6067492647834,47.5445043046316,23.9746844393558,26.9300125480758,30.0128953705683,56.9203017802195,43.7547792933328,26.6997109426637,67.6466211235666,55.3266842816341,51.4640974213023,23.7944985973841,23.3166941804883,22.3927037637251,68.0680469582794,31.3956225187843,25.2639110144643,18.2764105129826,17.9182619680464,31.6255641602937,17.1138258178891,24.6623128283857,25.5431287348273,16.9791227783725,20.9169411155292,27.3306208907044,21.0409119293982,20.6306481916093,19.6487735086916,34.2232977389823,40.0182658250013,116.0870635293,135.474691671675,154.174184943304,69.8068257507883,66.4697668206289,25.3002654032685,26.4611639130114,22.0841209418951,25.7085885963423,21.8659855542097,22.2933254571216,20.4150853268843,22.0612508786405,19.82085857989,15.3224805702225,16.8967186581868,24.2670769423557,19.0294298693012,22.9201883044974,24.5681039121215,16.3201156909187,20.1693687065389,20.0347438122094,13.5253096759148,13.9799584368975,82.9959078931697,80.1058537131926,35.943196599008,22.371020801516,21.759082678648,34.0013010731825,22.0923981932207,26.4335863387428,18.3982190372595,22.3263722577256,17.6654483129951,21.5537140451308,32.5348299684132,24.3820307087204,43.3168907501298,35.5533351576666,36.370494889884,29.1363845296363,40.9474800461974,23.9786147410026,22.2686579936568,15.7348667408714,14.3992821215893,14.0054120023585,13.6063143381075,12.5099791658677,15.6392980490487,14.4516580029127,34.360100515078,13.158541479712,26.5383165584962,15.2060838950565,16.3422723660691,16.9706338597328,27.9587641827183,12.5895742714965,19.4785437336513,44.7049846615035,13.0598485711453,14.3976655438418,13.5965142968179,13.6309481858389,22.8750301409313,18.5968441127039,20.3374454624963,15.5986428971502,15.1685272528479,17.6842976743856,14.0538322113436,18.661045591514,20.975988949995,29.8827435358793,15.4843327125617,20.921091503446,16.9258402017028,15.9747106905858,15.7164313039567,17.6796933993093,14.6174690313177,22.7658966250334,17.0298714416945,16.6413350547681,16.8913079197391,18.1932457914887,18.0730711996639,16.0195996600197,16.0510066398196,20.6995637491233,12.6398373716382,14.1541348913093,20.1756084570871,18.6413195281952,21.3418714582798,16.2055855314913,17.0456209621351,20.46348010173,17.8949850949359,16.0448421877781,14.2184902741798,15.179494507732,13.4939076929054,17.4017511923841,16.7001747664463,13.3041988557052,10.9775057645525,15.7021509949635,20.1878350621562,15.1269780197548,37.667741260153,43.8987940661483,21.3288250535234,17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|EntrezGene=59045
|HGNC=
|MCL_coexpression_id=718
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000152559,ENSMUST00000154960,ENSMUST00000155063_5end
|description=CAGE_peak_1_at_Stard3_5end
|id=chr11:98219716..98219771,+
|ontology_enrichment_celltype=CL:0002371!1.29e-12!118;CL:0000548!1.84e-11!115;CL:0000004!1.84e-11!115;CL:0000255!1.84e-11!115;CL:0000063!2.18e-11!66;CL:0000144!3.34e-11!121;CL:0000012!3.34e-11!121;CL:0000066!5.45e-09!25;CL:0000738!8.04e-08!17;CL:0002087!8.04e-08!17;CL:0000223!1.27e-07!20;CL:0002321!2.27e-07!70;CL:0000220!2.27e-07!70;CL:0002076!5.58e-07!15
|ontology_enrichment_celltype_v019_2=CL:0000066,5.45e-09,25;CL:0000738,8.04e-08,17;CL:0002087,8.04e-08,17;CL:0000223,1.27e-07,20;CL:0002321,2.27e-07,70;CL:0002076,5.58e-07,15
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!3.19e-11!130;UBERON:0000925!3.19e-11!130;UBERON:0006595!3.19e-11!130;UBERON:0001007!7.98e-11!128;UBERON:0001555!7.98e-11!128;UBERON:0007026!7.98e-11!128;UBERON:0004921!4.14e-10!126;UBERON:0004185!4.14e-10!126;UBERON:0001004!1.20e-09!42;UBERON:0000065!2.53e-09!41;UBERON:0005911!3.76e-09!69;UBERON:0000490!5.21e-08!66;UBERON:0000344!6.80e-08!15;UBERON:0001242!4.52e-07!13;UBERON:0000060!4.52e-07!13;UBERON:0001262!4.52e-07!13;UBERON:0004786!4.52e-07!13;UBERON:0000064!6.12e-07!99;UBERON:0000072!6.69e-07!27;UBERON:0003408!8.93e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.71e-13,118;UBERON:0000925,4.71e-13,118;UBERON:0006595,4.71e-13,118;UBERON:0001007,1.24e-12,116;UBERON:0001555,1.24e-12,116;UBERON:0007026,1.24e-12,116;UBERON:0004921,7.39e-12,114;UBERON:0011216,5.81e-11,194;UBERON:0001004,1.20e-09,42;UBERON:0000065,2.53e-09,41;UBERON:0005911,3.76e-09,69;UBERON:0000160,2.31e-08,31;UBERON:0000490,5.21e-08,66;UBERON:0000344,6.80e-08,15;UBERON:0001242,4.52e-07,13;UBERON:0001262,4.52e-07,13;UBERON:0004786,4.52e-07,13;UBERON:0000072,6.69e-07,27;UBERON:0003408,8.93e-07,24
|phase1_expression=18.2569685699465,46.0647538083957,68.2498859084304,63.8199485857411,90.1612313903425,39.1158703554703,41.8166626665991,42.7398200591617,81.7982475701184,80.0500680021218,65.0628279256919,49.7778272130899,38.1777627746589,40.2133851127388,13.6575002344422,14.3757439846776,9.79386629379405,27.1297462208084,24.8177124826387,28.434106670468,20.8356060870121,36.7376519443276,43.8815645753411,35.9982951285165,41.9818984352921,50.5324128421218,43.0761996159075,43.5251890025496,55.2968150618048,43.3491823187081,50.3328259187542,17.7808588568697,16.6067492647834,47.5445043046316,23.9746844393558,26.9300125480758,30.0128953705683,56.9203017802195,43.7547792933328,26.6997109426637,67.6466211235666,55.3266842816341,51.4640974213023,23.7944985973841,23.3166941804883,22.3927037637251,68.0680469582794,31.3956225187843,25.2639110144643,18.2764105129826,17.9182619680464,31.6255641602937,17.1138258178891,24.6623128283857,25.5431287348273,16.9791227783725,20.9169411155292,27.3306208907044,21.0409119293982,20.6306481916093,19.6487735086916,34.2232977389823,40.0182658250013,116.0870635293,135.474691671675,154.174184943304,69.8068257507883,66.4697668206289,25.3002654032685,26.4611639130114,22.0841209418951,25.7085885963423,21.8659855542097,22.2933254571216,20.4150853268843,22.0612508786405,19.82085857989,15.3224805702225,16.8967186581868,24.2670769423557,19.0294298693012,22.9201883044974,24.5681039121215,16.3201156909187,20.1693687065389,20.0347438122094,13.5253096759148,13.9799584368975,82.9959078931697,80.1058537131926,35.943196599008,22.371020801516,21.759082678648,34.0013010731825,22.0923981932207,26.4335863387428,18.3982190372595,22.3263722577256,17.6654483129951,21.5537140451308,32.5348299684132,24.3820307087204,43.3168907501298,35.5533351576666,36.370494889884,29.1363845296363,40.9474800461974,23.9786147410026,22.2686579936568,15.7348667408714,14.3992821215893,14.0054120023585,13.6063143381075,12.5099791658677,15.6392980490487,14.4516580029127,34.360100515078,13.158541479712,26.5383165584962,15.2060838950565,16.3422723660691,16.9706338597328,27.9587641827183,12.5895742714965,19.4785437336513,44.7049846615035,13.0598485711453,14.3976655438418,13.5965142968179,13.6309481858389,22.8750301409313,18.5968441127039,20.3374454624963,15.5986428971502,15.1685272528479,17.6842976743856,14.0538322113436,18.661045591514,20.975988949995,29.8827435358793,15.4843327125617,20.921091503446,16.9258402017028,15.9747106905858,15.7164313039567,17.6796933993093,14.6174690313177,22.7658966250334,17.0298714416945,16.6413350547681,16.8913079197391,18.1932457914887,18.0730711996639,16.0195996600197,16.0510066398196,20.6995637491233,12.6398373716382,14.1541348913093,20.1756084570871,18.6413195281952,21.3418714582798,16.2055855314913,17.0456209621351,20.46348010173,17.8949850949359,16.0448421877781,14.2184902741798,15.179494507732,13.4939076929054,17.4017511923841,16.7001747664463,13.3041988557052,10.9775057645525,15.7021509949635,20.1878350621562,15.1269780197548,37.667741260153,43.8987940661483,21.3288250535234,17.1855137176724,15.3352278973291,16.7397325437374,18.0126215514345,23.9684288901825,37.9623249235609,28.8223170767019,30.1602250560323,28.0528625578023,24.9554031512474,30.5598598942435,33.5013977305776,36.6419942788036,25.0361629258068,18.6225075553858,24.7957018480777,23.0126000465205,18.2315337937568,17.60409079247,16.5047361894312,16.9751670176542,17.1128613347099,16.4118228015995,20.7516838961004,12.5133829287071,14.9384836286034,11.4679677316275,16.8373900752457,19.5353499399458,22.4070749567649,22.1526025837124,23.8338783359302,19.4938603363538,17.2521847832825,18.2349064357567,18.4102227137591,20.4588891137161,13.8136008411872,19.7801843758981,48.9595953941502,16.8647356475731,15.1557428091084,19.1811946925963,23.2343345805617,30.6536451118523,44.0380735639125,45.8564072465827,25.3792582010968,30.7835918611797,33.9638657240448,37.3608357551883,37.990696010497,41.6589288714753,113.093462954454,153.925308520695,17.7035138286853,20.1433824802455,16.3761601787548,15.589154316763,9.3442918864705,15.4007265594668,17.3529520678941,16.0079885161622,20.2497993868831,29.6321309461165,28.2954316084641,30.5722653251939,24.2886421004937,18.4121190484126,15.4162233399144,18.6366363524648,23.2781739741561,22.0801348547396,16.125808976004,27.8799507823585,34.5137359683903,20.3935734370184,18.1394134178851,11.6935149448657,23.328849537581,16.6014979889721,21.9664049192988,16.3590178264877,15.6858846489277,14.2216541071117,20.0295356292498,17.5330423521918,11.9153862013826,20.887086907632,24.5781499187234,20.5763553630329,20.0394464015769,20.5124140242381,21.2268236576736,17.0500371504176,20.6511103096065,41.3072538184449,22.7144249996611,12.8611277294354,15.1776561094151,10.9769523369244,14.6827983123858,11.6540038818993,34.1032578856925,13.1651964427462,18.7957968877638,22.4961686079913,21.4825651748866,10.5486335922627,12.9859516334974,11.6676868335327,12.2384469595576,15.1147568509551,15.2019971184866,22.9120948323627,19.1383276116587,21.3485440483191,18.7929293029934,19.4452115293456,21.8362563746178,16.7231789517178,16.2827307778912,22.5110110106265,24.6268449254406,33.552322906694,7.89170114157866,18.5400517094534,15.222181122053,19.8340212110929,18.4698547573155,19.2609983059487,19.3639443765494,21.2233147295639,19.2941193743308,11.8376219204743,13.8254403003775,33.4971787865869,18.8534450219853,15.8174874033834,22.0865399062252,22.9154170454376,26.6233015406895,24.8804580506335,24.0733929294561,20.496189339474,26.6723823292499,30.8528126518732,38.3009471307227,35.7908050902026,37.8681163068283,16.09785723668,22.4205812907805,16.5073496161435,16.6205770200438,16.4211154927362,41.4778270747112,30.7694728769005,20.1506276334322,22.069172577556,17.5073071211291,13.3494318587081,20.6242384838183,16.6697586873377,22.6077231524312,21.1510291269116,20.925697507186,30.621841819247,20.3914084042892,25.3702552758392,9.02949923982337,17.1580695562443,16.3904261523969,15.8019366094391,7.54607385460736,10.1113929647508,13.5570503958985,15.4526292929171,15.4041220604071,16.9307131881744,14.4483200937437,16.7877443833608,13.6716600906028,14.2776089862858,16.6562859971278,14.7651044297753,17.3826488917283,14.4681915347779,14.4230065281157,13.2479028120958,17.1434626192708,14.5530161050657,14.3061713968393,15.6974129962915,15.6221571489449,15.9921608915269,14.451309856949,18.9410192235247,14.2594319538155,12.906272248128,13.9989321386525,14.677167873959,16.7784727699573,15.9584946421545,17.1686883773216,22.7327625923531,16.1412809827332,21.2722343507815,15.1117782334386,18.9708620442783,17.3900876715316
|short_description=p1@Stard3
}}

Revision as of 21:47, 12 September 2013

Short description:p1@Stard3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Stard3_5end
Coexpression cluster:MCL_coexpression_mm9:718
Association with transcript: 0bp_to_ENSMUST00000152559, ENSMUST00000154960, ENSMUST00000155063_5end
EntrezGene:Stard3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Stard3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G718.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I546.06
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I668.25
CD326+ enterocyte, pool1.CNhs13542.11848-124I363.82
CD326+ enterocyte, pool2.CNhs13197.11849-124I490.16
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I739.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I841.82
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E942.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E781.80
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F280.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E665.06
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F149.78
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E438.18
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E840.21
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A314.38
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A227.13
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A424.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A628.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H236.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I943.88
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D136.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D241.98
GP2+ M cell, pool1.CNhs13228.11845-124H950.53
GP2+ M cell, pool2.CNhs13231.11846-124I143.08
GP2+ M cell, pool3.CNhs13240.11847-124I243.53
Ileum epithelium, pool1.CNhs13199.10252-104B955.30
Ileum epithelium, pool2.CNhs13232.10253-104C143.35
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C850.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I317.78
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G616.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F523.97
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F626.93
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F730.01
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G856.92
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H143.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H326.70
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G967.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H255.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H451.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D823.79
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D923.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B322.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B768.07
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C231.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B825.26
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C318.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C417.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C431.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A217.11
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I924.66
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A125.54
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C116.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E120.92
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C527.33
Mouse Granule cells, donor1.CNhs12131.11713-123C321.04
Mouse Granule cells, donor2.CNhs12357.11731-123E320.63
Mouse Granule cells, donor3.CNhs12108.11636-122C719.65
Mouse Meningeal cells, donor1.CNhs12132.11716-123C634.22
Mouse Meningeal cells, donor3.CNhs12109.11639-122D140.02
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7116.09
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7135.47
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2154.17
Mouse Microglia, donor1.CNhs12629.11718-123C869.81
Mouse Microglia, donor2.CNhs12634.11736-123E866.47
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D525.30
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F526.46
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D922.08
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F125.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.42
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.06
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.90
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.27
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D822.92
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.57
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D620.03
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.98
Mouse Schwann, donor1.CNhs12507.11728-123D983.00
Mouse Schwann, donor2.CNhs12573.11746-123F980.11
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G335.94
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F722.37
Mouse hepatocyte, donor1.CNhs13078.11714-123C421.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C834.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F422.09
Mouse hepatocyte, donor8.CNhs13091.11824-124F626.43
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A718.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I722.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E317.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I821.55
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G632.53
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H124.38
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I843.32
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G136.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G229.14
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G340.95
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B623.98
accessory axillary lymph node, adult.CNhs10475.1063-29H922.27
adrenal gland, adult.CNhs10508.49-24D715.73
adrenal gland, embryo E14.CNhs11038.406-44C514.40
adrenal gland, embryo E16.CNhs11004.1254-43D614.01
adrenal gland, embryo E17.CNhs11043.1263-45I113.61
adrenal gland, embryo E18.CNhs11026.1262-18F512.51
adrenal gland, neonate N00.CNhs11191.1311-23C115.64
adrenal gland, neonate N25.CNhs11223.1377-27I314.45
amnion, adult pregnant day17.5.CNhs10488.583-22A834.36
aorta, adult.CNhs10498.46-23H113.16
bone (os femoris), adult.CNhs10483.56-12G226.54
bone (os femoris), neonate N02.CNhs11227.1985-43F515.21
bone (os femoris), neonate N16.CNhs11225.1525-43A616.34
bone (os femoris), neonate N20.CNhs11195.1350-25C316.97
cecum, adult.CNhs10467.37-13H427.96
cerebellum, adult.CNhs10494.15-8B212.59
cerebellum, neonate N30.CNhs11135.1395-42I219.48
colon, adult.CNhs10468.36-18H744.70
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.06
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D114.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.60
corpora quadrigemina, adult.CNhs10501.16-22A413.63
corpus striatum, adult.CNhs10487.19-21D822.88
corpus striatum, neonate N00.CNhs11226.630-43F118.60
cortex, adult.CNhs10473.12-14D520.34
cortex, neonate N30.CNhs11107.1392-42F215.60
diencephalon, adult.CNhs10482.20-12F215.17
diencephalon, neonate N30.CNhs11201.1388-42B217.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.05
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A218.66
epididymis, adult.CNhs10490.58-23B220.98
eyeball, adult.CNhs10484.31-12G429.88
eyeball, embryo E12.CNhs11016.345-16C615.48
eyeball, embryo E14.CNhs10521.399-16E220.92
eyeball, embryo E15.CNhs10593.426-16C916.93
eyeball, embryo E17.CNhs11023.1261-18D415.97
eyeball, neonate N00.CNhs11207.633-15C615.72
eyeball, neonate N01.CNhs11140.1532-43E717.68
eyeball, neonate N02.CNhs11205.1551-44G814.62
eyeball, neonate N16.CNhs11188.777-19A222.77
forelimb, embryo E11.CNhs10596.335-25E217.03
forelimb, embryo E12.CNhs10600.359-14H216.64
forelimb, embryo E13.CNhs10589.384-1E216.89
forelimb, embryo E14.CNhs10577.413-26A818.19
forelimb, embryo E15.CNhs11007.437-20E718.07
forelimb, embryo E17.CNhs10598.1517-43C416.02
forelimb, embryo E18.CNhs11008.1520-43B516.05
gonad, embryo E13.CNhs11044.1564-45I620.70
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C812.64
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.15
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D520.18
heart, embryo E11.CNhs10586.331-24E918.64
heart, embryo E12.CNhs11015.353-12F521.34
heart, embryo E13.CNhs11013.376-3I916.21
heart, embryo E14.CNhs10597.403-26D417.05
heart, embryo E15.CNhs11017.431-16C820.46
heart, embryo E16.CNhs11021.457-17C617.89
heart, embryo E17.CNhs11025.479-18E516.04
heart, embryo E18.CNhs11030.1283-20G314.22
heart, neonate N00.CNhs11213.639-21E315.18
heart, neonate N03.CNhs11221.1349-25I213.49
heart, neonate N10.CNhs11118.749-24G117.40
heart, neonate N16.CNhs11209.782-15G116.70
heart, neonate N20.CNhs11127.821-26I613.30
heart, neonate N25.CNhs11196.1351-25D310.98
heart, neonate N30.CNhs11202.1390-42D215.70
hippocampus, adult.CNhs10478.13-16E820.19
hippocampus, neonate N00.CNhs11228.627-43G115.13
intestinal mucosa, adult.CNhs10506.860-29I337.67
intestine, adult.CNhs10496.178-9A343.90
intestine, embryo E12.CNhs11019.1251-16I521.33
intestine, embryo E13.CNhs11010.381-16D517.19
intestine, embryo E15.CNhs10602.976-16D815.34
intestine, embryo E16.CNhs10585.463-22H416.74
intestine, embryo E17.CNhs10582.482-18D318.01
intestine, embryo E18.CNhs10526.1289-20F723.97
intestine, neonate N00.CNhs11126.644-26D137.96
intestine, neonate N01.CNhs11192.1322-23E928.82
intestine, neonate N06.CNhs11102.688-20B830.16
intestine, neonate N07.CNhs11095.720-20F228.05
intestine, neonate N10.CNhs11098.755-23A524.96
intestine, neonate N20.CNhs11187.827-18D130.56
intestine, neonate N25.CNhs11121.1352-25E333.50
intestine, neonate N30.CNhs11131.1384-42G136.64
kidney, embryo E14.CNhs10606.411-4I925.04
kidney, embryo E15.CNhs10997.434-16F818.62
kidney, embryo E16.CNhs10584.464-22A524.80
kidney, embryo E17.CNhs11028.483-18I223.01
kidney, embryo E18.CNhs11001.1288-20C718.23
kidney, neonate N00.CNhs11214.646-21G717.60
kidney, neonate N10.CNhs11206.758-6D516.50
kidney, neonate N20.CNhs11113.832-19I116.98
kidney, neonate N25.CNhs11122.1353-25F317.11
kidney, neonate N30.CNhs11203.1385-42H116.41
liver, adult pregnant day01.CNhs10466.508-5B220.75
liver, embryo E12.CNhs10601.355-15F812.51
liver, embryo E13.CNhs10524.378-3H614.94
liver, embryo E14.CNhs10594.409-16E111.47
liver, embryo E15.CNhs10520.433-16D716.84
liver, embryo E16.CNhs10523.462-17F519.54
liver, embryo E17.CNhs10510.481-18A322.41
liver, embryo E18.CNhs10579.499-43G422.15
liver, neonate N00.CNhs11117.641-24F423.83
liver, neonate N03.CNhs11123.1345-25G219.49
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H218.23
liver, neonate N10.CNhs11115.751-24B918.41
liver, neonate N20.CNhs11220.823-25A320.46
liver, neonate N25.CNhs11198.1368-26H113.81
liver, neonate N30.CNhs11106.1382-42D119.78
lung, adult.CNhs10474.28-22B148.96
lung, embryo E12.CNhs10522.354-16G216.86
lung, embryo E14.CNhs10604.404-26F815.16
lung, embryo E15.CNhs11020.432-17C519.18
lung, embryo E16.CNhs10998.458-17B623.23
lung, embryo E17.CNhs10605.480-44A630.65
lung, embryo E18.CNhs10583.1287-20I644.04
lung, neonate N00.CNhs11224.640-42C645.86
lung, neonate N06.CNhs11212.683-20E525.38
lung, neonate N07.CNhs11111.715-19A330.78
lung, neonate N10.CNhs11219.750-23E633.96
lung, neonate N20.CNhs11109.822-18A437.36
lung, neonate N25.CNhs11119.1359-25C737.99
lung, neonate N30.CNhs11133.1394-42H241.66
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1113.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1153.93
mammary gland, adult lactating day02.CNhs10480.595-22B617.70
mammary gland, adult pregnant day19.CNhs10476.588-5H220.14
medulla oblongata, adult.CNhs10477.17-12C216.38
medulla oblongata, neonate N30.CNhs11200.1396-42A315.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.34
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C215.40
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.35
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.01
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D729.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D828.30
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D930.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D424.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D518.41
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.42
olfactory brain, adult.CNhs10489.18-22I918.64
ovary, adult.CNhs10507.91-2I723.28
ovary, embryo E18.CNhs11040.505-44H722.08
ovary, neonate N00.CNhs11217.1299-22I416.13
oviduct, adult pregnant day01.CNhs10500.988-6G627.88
pancreas, adult.CNhs10486.34-16E434.51
pancreas, embryo E14.CNhs11012.405-44F420.39
pancreas, embryo E15.CNhs11042.1556-45F218.14
pancreas, embryo E16.CNhs11003.460-26E511.69
pancreas, embryo E17.CNhs10599.1558-45G323.33
pancreas, embryo E18.CNhs10580.1535-43I716.60
pancreas, neonate N00.CNhs11105.645-26G921.97
pancreas, neonate N01.CNhs11138.1531-43D716.36
pancreas, neonate N02.CNhs11139.1539-43D815.69
pancreas, neonate N16.CNhs11136.787-43B614.22
pancreas, neonate N25.CNhs11094.1555-45E220.03
pancreas, neonate N30.CNhs11182.1548-44H517.53
pituitary gland, adult.CNhs10493.21-1G811.92
pituitary gland, embryo E12.CNhs11018.346-16E620.89
pituitary gland, embryo E13.CNhs11009.370-44C724.58
pituitary gland, embryo E14.CNhs11037.398-44A520.58
pituitary gland, embryo E15.CNhs10592.427-16B920.04
pituitary gland, embryo E16.CNhs11036.449-43F620.51
pituitary gland, embryo E17.CNhs11039.1265-44F521.23
pituitary gland, neonate N00.CNhs11190.1308-22E917.05
placenta, adult pregnant day10.CNhs10472.539-13I720.65
placenta, adult pregnant day17.CNhs10464.577-18G341.31
prostate, adult.CNhs10470.859-1F822.71
skin, adult.CNhs10492.30-1C312.86
skin, neonate N00.CNhs11124.650-25G415.18
skin, neonate N03.CNhs11215.662-22H310.98
skin, neonate N06.CNhs11097.693-20I514.68
skin, neonate N10.CNhs11108.762-6C411.65
small intestine, neonate N16.CNhs11114.790-21I134.10
spinal cord, adult.CNhs10505.24-13C913.17
spleen, adult.CNhs10465.25-2G218.80
spleen, embryo E16.CNhs11035.461-43C122.50
spleen, embryo E18.CNhs11011.1271-21F221.48
spleen, neonate N10.CNhs11116.752-24D110.55
spleen, neonate N20.CNhs11112.824-19H112.99
spleen, neonate N25.CNhs11099.1354-25G311.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C915.11
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D315.20
stomach, adult.CNhs10503.33-1H622.91
stomach, embryo E12.CNhs10588.356-43E319.14
stomach, embryo E15.CNhs10603.1252-16G821.35
stomach, embryo E16.CNhs11022.459-17D418.79
stomach, embryo E17.CNhs11006.1035-18D519.45
stomach, embryo E18.CNhs10999.1286-20C621.84
stomach, neonate N03.CNhs11193.1340-24B816.72
stomach, neonate N07.CNhs11210.718-18A916.28
stomach, neonate N25.CNhs11104.1355-25E422.51
stomach, neonate N30.CNhs11134.1386-42I124.63
submandibular gland, adult.CNhs10469.59-29C133.55
testis, adult.CNhs10504.57-7G57.89
testis, embryo E13.CNhs11031.389-23F518.54
testis, embryo E15.CNhs11034.443-27C515.22
testis, embryo E16.CNhs11033.470-26G519.83
testis, embryo E17.CNhs11029.486-18I518.47
testis, embryo E18.CNhs11027.503-18G519.26
testis, neonate N00.CNhs11189.1300-22B719.36
testis, neonate N07.CNhs11222.726-26I421.22
testis, neonate N10.CNhs11204.763-44D919.29
testis, neonate N20.CNhs11110.839-18H311.84
testis, neonate N30.CNhs11130.1391-42E213.83
thymus, adult.CNhs10471.38-12B533.50
thymus, embryo E14.CNhs11041.402-44I418.85
thymus, embryo E15.CNhs11005.430-45I215.82
thymus, embryo E16.CNhs11002.456-26C522.09
thymus, embryo E17.CNhs10581.478-18C122.92
thymus, embryo E18.CNhs10595.1273-19G426.62
thymus, neonate N02.CNhs11181.1541-43F824.88
thymus, neonate N03.CNhs11137.2104-43C724.07
thymus, neonate N06.CNhs11197.681-26C420.50
thymus, neonate N07.CNhs11211.713-19D326.67
thymus, neonate N10.CNhs11194.748-24E430.85
thymus, neonate N20.CNhs11186.820-7A238.30
thymus, neonate N25.CNhs11125.1362-25G735.79
thymus, neonate N30.CNhs11132.1393-42G237.87
tongue, adult.CNhs10499.32-1B416.10
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H322.42
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F716.51
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G516.62
urinary bladder, adult.CNhs10481.879-12E416.42
uterus, adult pregnant day19.CNhs10497.590-15F541.48
uterus, adult.CNhs10509.92-27E530.77
vagina, adult.CNhs10502.89-27D520.15
vesicular gland, adult.CNhs10491.51-27F822.07
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A117.51
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.35
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.62
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.15
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A730.62
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A820.39
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A925.37
whole body, embryo E11.CNhs11014.324-5I89.03
whole body, embryo E12.CNhs10587.857-27C917.16
whole body, embryo E13.CNhs10512.372-23H216.39
whole body, embryo E14.5.CNhs10578.420-27D215.80
whole body, embryo E14.CNhs10519.395-14B17.55
whole body, embryo E16.CNhs10514.453-14F210.11
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G515.45
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.40
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.93
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.66
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.38
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.25
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.31
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.70
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.62
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.99
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.68
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G516.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.96
whole body, embryo E17.5.CNhs10513.490-9F917.17
whole body, embryo E17.CNhs10517.475-3I522.73
whole body, embryo E18.CNhs10516.493-3B316.14
whole body, neonate N00.CNhs10525.657-19C221.27
whole body, neonate N01.CNhs10576.659-23C615.11
whole body, neonate N06.CNhs10515.692-21D118.97
whole body, neonate N10.CNhs10518.761-6B417.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell5.45e-0925
leukocyte8.04e-0817
nongranular leukocyte8.04e-0817
endodermal cell1.27e-0720
embryonic cell2.27e-0770
endo-epithelial cell5.58e-0715

Uber anatomy
Ontology termp-valuen
endoderm-derived structure4.71e-13118
endoderm4.71e-13118
presumptive endoderm4.71e-13118
digestive system1.24e-12116
digestive tract1.24e-12116
primitive gut1.24e-12116
subdivision of digestive tract7.39e-12114
organ system subdivision5.81e-11194
respiratory system1.20e-0942
respiratory tract2.53e-0941
endo-epithelium3.76e-0969
intestine2.31e-0831
unilaminar epithelium5.21e-0866
mucosa6.80e-0815
intestinal mucosa4.52e-0713
wall of intestine4.52e-0713
gastrointestinal system mucosa4.52e-0713
segment of respiratory tract6.69e-0727
gland of gut8.93e-0724







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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