FFCP PHASE1:Mm9::chr3:102799632..102799711,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66641|HGNC=|UniProt=Q9CPR7|association_with_transcript=0bp_to_ENSMUST00000029447,ENSMUST00000151065,NM_025679,uc008qsf.1_5end|description=CAGE_peak_1_at_Sike1_5end|id=chr3:102799632..102799711,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!5.54e-11!18;UBERON:0000948!5.54e-11!18;UBERON:0005498!5.54e-11!18;UBERON:0004140!5.54e-11!18;UBERON:0009881!5.54e-11!18;UBERON:0004141!5.54e-11!18;UBERON:0003084!5.54e-11!18;UBERON:0007005!5.54e-11!18;UBERON:0004139!5.54e-11!18;UBERON:0004291!5.54e-11!18;UBERON:0003103!1.99e-08!43;UBERON:0004535!1.68e-07!23;UBERON:0001009!1.68e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.54e-11,18;UBERON:0000948,5.54e-11,18;UBERON:0005498,5.54e-11,18;UBERON:0004140,5.54e-11,18;UBERON:0009881,5.54e-11,18;UBERON:0004141,5.54e-11,18;UBERON:0003084,5.54e-11,18;UBERON:0007005,5.54e-11,18;UBERON:0004139,5.54e-11,18;UBERON:0004291,5.54e-11,18;UBERON:0010314,9.34e-10,92;UBERON:0003103,1.99e-08,43;UBERON:0004535,1.68e-07,23;UBERON:0001009,1.68e-07,23;UBERON:0004121,4.97e-07,95;UBERON:0000924,4.97e-07,95;UBERON:0006601,4.97e-07,95|phase1_expression=30.9087274912252,29.3139342417063,31.8499467572675,56.863271725684,49.5886772646884,27.0285627778143,26.1646157466989,32.4099541838356,7.88416844049334,6.31974221069382,19.0051944730311,16.1937482760533,40.9169744535582,37.6781934425879,10.6595123781012,12.9584171129489,6.29605690315332,36.5936111815556,33.7301506670117,34.3755617956405,21.941168858976,18.2695350209629,20.8959831311148,35.6783102829297,34.1819828790083,33.3054539186712,23.6919097887491,21.5471232685889,30.0237002741071,32.0078264795112,25.7207392360153,17.7808588568697,13.5314253268605,0,13.5760261283099,15.4598220183398,12.6585000882669,44.7828844888491,50.0054620495232,40.8348520299563,45.2938245783881,48.4962294320496,55.8336905985827,21.9060463277504,19.9712554502444,27.3484660720905,32.0780451182696,41.4247797122848,33.8316721411087,34.997381833371,36.9564153090957,51.7509231713898,43.4556949689537,28.2891235384424,32.9371923159615,43.734104126111,36.6762803121609,47.9575045818021,40.0586592502004,38.6163414868584,50.0726808769882,31.8513860144984,24.0109594950008,33.7462393980525,31.6437236021432,32.6820852875206,20.3728075152515,23.8215349299364,37.6393292679774,37.2616389795466,37.437843120546,36.5633260036869,41.9650227808066,42.749288926019,41.8844708349693,32.1726575313507,31.9336054898227,31.4110851689562,31.0285197177612,44.5775652528055,43.9140689291566,43.7567231267678,27.9182999001381,33.7657566019008,31.6292372897997,44.1942878210502,42.7115042397309,47.3454592396263,45.4357159999104,38.3147809741403,25.218210517046,33.5565312022741,14.2793980078628,18.3499085156858,22.7421746106684,13.8888335000174,25.1395512035836,21.6446509674133,26.4981724694926,28.2671659608272,44.9290509087611,20.5322363862909,22.9324715735981,14.2213340630666,40.2673336280858,38.7640594176901,34.88118670602,21.8091210263405,49.9750115439041,27.4617957269926,24.9818870543236,25.5751001782199,21.4472412448134,29.6923601888666,35.3942008478471,31.1653146497595,45.4838740631248,37.1620347284173,29.1921482143459,47.8829875844331,31.1386541029155,29.0925151881133,20.5030937339934,30.7419836862124,29.3225389538837,20.9474785271045,10.9031763300387,17.3971791988088,13.8506547509641,27.4116870110826,32.0250421973039,41.2146274930195,29.8977830730716,31.708716708961,27.2202338373024,31.6370462982127,35.9492954391617,26.74749868117,35.8866316975818,23.1486041475121,36.6939649154824,39.5431619625573,43.2149111532838,37.525499641093,43.9515784517578,47.2739627851096,44.6957226149907,41.9099460597205,23.4969112296798,34.9846248310466,30.2635933561992,30.4682068074329,31.4193391624926,34.4769644856945,35.6003095985742,31.2483798905034,18.9597560574573,15.9555702411123,13.6398479709884,39.5610225542809,48.5468944160869,39.6136535214233,48.5326707949681,45.4525375336503,50.1368116883979,46.739322894832,56.6056876953197,56.3976603633429,54.3047504714485,52.6977559693896,51.3976252520725,56.2869951587529,54.8875288227627,48.4485171724942,30.4920425417985,45.2780294468851,16.1905203662061,23.0071992997284,28.1540490706509,28.1006372951131,23.8404803445873,29.6474781196314,24.6839628667806,21.4954957507192,31.3189180619378,23.7166494802576,26.3901969240283,25.6653848933085,29.0496489807489,19.7740269903929,28.5302225834596,31.8626037206988,25.4154987277129,29.1333707154809,30.4310886317317,22.8089487186752,29.8686830238144,32.2624771495465,37.2463203661875,26.4222164883488,29.9867570177026,25.1730214400473,17.1942523710546,16.017130148745,13.1694526725846,13.0420025183215,11.3601667977562,11.3353265083636,15.786802810448,16.1109836972454,16.8620635846037,20.0429831627299,24.4405951096503,25.3055844414582,25.2750515222794,20.9640468696103,17.5809465251474,17.3679667690812,48.7748422039836,29.1816774126547,32.1041003590791,33.9490171550376,34.4994664984098,38.526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| ||
|EntrezGene=66641 | |||
|HGNC= | |||
|UniProt=Q9CPR7 | |||
|association_with_transcript=0bp_to_ENSMUST00000029447,ENSMUST00000151065,NM_025679,uc008qsf.1_5end | |||
|description=CAGE_peak_1_at_Sike1_5end | |||
|id=chr3:102799632..102799711,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!5.54e-11!18;UBERON:0000948!5.54e-11!18;UBERON:0005498!5.54e-11!18;UBERON:0004140!5.54e-11!18;UBERON:0009881!5.54e-11!18;UBERON:0004141!5.54e-11!18;UBERON:0003084!5.54e-11!18;UBERON:0007005!5.54e-11!18;UBERON:0004139!5.54e-11!18;UBERON:0004291!5.54e-11!18;UBERON:0003103!1.99e-08!43;UBERON:0004535!1.68e-07!23;UBERON:0001009!1.68e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.54e-11,18;UBERON:0000948,5.54e-11,18;UBERON:0005498,5.54e-11,18;UBERON:0004140,5.54e-11,18;UBERON:0009881,5.54e-11,18;UBERON:0004141,5.54e-11,18;UBERON:0003084,5.54e-11,18;UBERON:0007005,5.54e-11,18;UBERON:0004139,5.54e-11,18;UBERON:0004291,5.54e-11,18;UBERON:0010314,9.34e-10,92;UBERON:0003103,1.99e-08,43;UBERON:0004535,1.68e-07,23;UBERON:0001009,1.68e-07,23;UBERON:0004121,4.97e-07,95;UBERON:0000924,4.97e-07,95;UBERON:0006601,4.97e-07,95 | |||
|phase1_expression=30.9087274912252,29.3139342417063,31.8499467572675,56.863271725684,49.5886772646884,27.0285627778143,26.1646157466989,32.4099541838356,7.88416844049334,6.31974221069382,19.0051944730311,16.1937482760533,40.9169744535582,37.6781934425879,10.6595123781012,12.9584171129489,6.29605690315332,36.5936111815556,33.7301506670117,34.3755617956405,21.941168858976,18.2695350209629,20.8959831311148,35.6783102829297,34.1819828790083,33.3054539186712,23.6919097887491,21.5471232685889,30.0237002741071,32.0078264795112,25.7207392360153,17.7808588568697,13.5314253268605,0,13.5760261283099,15.4598220183398,12.6585000882669,44.7828844888491,50.0054620495232,40.8348520299563,45.2938245783881,48.4962294320496,55.8336905985827,21.9060463277504,19.9712554502444,27.3484660720905,32.0780451182696,41.4247797122848,33.8316721411087,34.997381833371,36.9564153090957,51.7509231713898,43.4556949689537,28.2891235384424,32.9371923159615,43.734104126111,36.6762803121609,47.9575045818021,40.0586592502004,38.6163414868584,50.0726808769882,31.8513860144984,24.0109594950008,33.7462393980525,31.6437236021432,32.6820852875206,20.3728075152515,23.8215349299364,37.6393292679774,37.2616389795466,37.437843120546,36.5633260036869,41.9650227808066,42.749288926019,41.8844708349693,32.1726575313507,31.9336054898227,31.4110851689562,31.0285197177612,44.5775652528055,43.9140689291566,43.7567231267678,27.9182999001381,33.7657566019008,31.6292372897997,44.1942878210502,42.7115042397309,47.3454592396263,45.4357159999104,38.3147809741403,25.218210517046,33.5565312022741,14.2793980078628,18.3499085156858,22.7421746106684,13.8888335000174,25.1395512035836,21.6446509674133,26.4981724694926,28.2671659608272,44.9290509087611,20.5322363862909,22.9324715735981,14.2213340630666,40.2673336280858,38.7640594176901,34.88118670602,21.8091210263405,49.9750115439041,27.4617957269926,24.9818870543236,25.5751001782199,21.4472412448134,29.6923601888666,35.3942008478471,31.1653146497595,45.4838740631248,37.1620347284173,29.1921482143459,47.8829875844331,31.1386541029155,29.0925151881133,20.5030937339934,30.7419836862124,29.3225389538837,20.9474785271045,10.9031763300387,17.3971791988088,13.8506547509641,27.4116870110826,32.0250421973039,41.2146274930195,29.8977830730716,31.708716708961,27.2202338373024,31.6370462982127,35.9492954391617,26.74749868117,35.8866316975818,23.1486041475121,36.6939649154824,39.5431619625573,43.2149111532838,37.525499641093,43.9515784517578,47.2739627851096,44.6957226149907,41.9099460597205,23.4969112296798,34.9846248310466,30.2635933561992,30.4682068074329,31.4193391624926,34.4769644856945,35.6003095985742,31.2483798905034,18.9597560574573,15.9555702411123,13.6398479709884,39.5610225542809,48.5468944160869,39.6136535214233,48.5326707949681,45.4525375336503,50.1368116883979,46.739322894832,56.6056876953197,56.3976603633429,54.3047504714485,52.6977559693896,51.3976252520725,56.2869951587529,54.8875288227627,48.4485171724942,30.4920425417985,45.2780294468851,16.1905203662061,23.0071992997284,28.1540490706509,28.1006372951131,23.8404803445873,29.6474781196314,24.6839628667806,21.4954957507192,31.3189180619378,23.7166494802576,26.3901969240283,25.6653848933085,29.0496489807489,19.7740269903929,28.5302225834596,31.8626037206988,25.4154987277129,29.1333707154809,30.4310886317317,22.8089487186752,29.8686830238144,32.2624771495465,37.2463203661875,26.4222164883488,29.9867570177026,25.1730214400473,17.1942523710546,16.017130148745,13.1694526725846,13.0420025183215,11.3601667977562,11.3353265083636,15.786802810448,16.1109836972454,16.8620635846037,20.0429831627299,24.4405951096503,25.3055844414582,25.2750515222794,20.9640468696103,17.5809465251474,17.3679667690812,48.7748422039836,29.1816774126547,32.1041003590791,33.9490171550376,34.4994664984098,38.5264392116176,42.3717680777104,53.2714858651791,43.9802052056273,37.8704619299405,59.7955382465577,48.8312677852899,48.1791099405849,49.9039252106215,34.6819953060326,39.7051149187658,20.6540994667995,26.7658643915591,28.0963532478636,24.3800308111783,23.9345020249946,37.1132262990428,28.7112479668794,29.6733445665445,32.5289330576526,30.8269749358792,34.9793918309359,35.3845663486041,34.0040989406911,36.8242380968253,33.5994611254545,36.630630072086,32.7881596831101,24.5730533060812,30.4598613991187,33.1589947174796,30.5313818181915,22.0930378901033,21.4649725444973,24.5186603682668,18.6040192514887,27.3617281670095,34.8878195777099,23.6296924160379,23.5288269733916,24.6508671189936,21.0837217149998,21.6584640821192,32.0013229408561,36.1922799002934,27.941475697075,28.7211626942334,41.3202744386497,32.6414936211789,33.2389021616284,20.0946866415636,28.395276675709,35.5877879051218,33.0792597082443,42.5406532589018,40.2046422472805,40.4096597018644,31.7530435048343,35.6185752446783,26.5247561333164,27.2575193955449,15.7201210334024,29.9260958546673,25.7420393043899,17.1415295874269,18.4537207423384,17.1583629904892,9.85874893964361,8.11718423477216,10.2267980615274,31.5041303944987,26.0977194704437,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| |||
|short_description=p1@Sike1 | |||
}} |
Revision as of 01:02, 14 September 2013
Short description: | p1@Sike1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sike1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000029447, ENSMUST00000151065, NM_025679, uc008qsf.1_5end |
EntrezGene: | Sike1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 5.54e-11 | 18 |
heart | 5.54e-11 | 18 |
primitive heart tube | 5.54e-11 | 18 |
primary heart field | 5.54e-11 | 18 |
anterior lateral plate mesoderm | 5.54e-11 | 18 |
heart tube | 5.54e-11 | 18 |
heart primordium | 5.54e-11 | 18 |
cardiac mesoderm | 5.54e-11 | 18 |
cardiogenic plate | 5.54e-11 | 18 |
heart rudiment | 5.54e-11 | 18 |
structure with developmental contribution from neural crest | 9.34e-10 | 92 |
compound organ | 1.99e-08 | 43 |
cardiovascular system | 1.68e-07 | 23 |
circulatory system | 1.68e-07 | 23 |
ectoderm-derived structure | 4.97e-07 | 95 |
ectoderm | 4.97e-07 | 95 |
presumptive ectoderm | 4.97e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.