FFCP PHASE1:Mm9::chr9:65619254..65619257,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=114|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:65619254..65619257,-|id=chr9:65619254..65619257,-|ontology_enrichment_celltype=CL:0000540!1.13e-20!33;CL:0000047!1.13e-20!33;CL:0000031!1.13e-20!33;CL:0000404!1.13e-20!33;CL:0000221!8.89e-20!44;CL:0000133!8.89e-20!44;CL:0000393!2.69e-19!39;CL:0000211!2.69e-19!39;CL:0002319!4.05e-19!43;CL:0000055!8.46e-18!50;CL:0002321!1.09e-13!70;CL:0000220!1.09e-13!70;CL:0000107!2.99e-13!9;CL:0000117!5.81e-11!23;CL:0000337!5.81e-11!23;CL:0000548!4.93e-09!115;CL:0000004!4.93e-09!115;CL:0000255!4.93e-09!115;CL:0000144!1.43e-08!121;CL:0000012!1.43e-08!121;CL:0002371!1.65e-08!118;CL:0000034!2.29e-08!97;CL:0000723!4.07e-08!91;CL:0000048!4.07e-08!91|ontology_enrichment_celltype_v019_2=CL:0000107,6.73e-40,9;CL:0000540,5.14e-23,33;CL:0000047,5.14e-23,33;CL:0000031,5.14e-23,33;CL:0000404,5.14e-23,33;CL:0000393,3.04e-19,39;CL:0000211,3.04e-19,39;CL:0002319,2.60e-17,43;CL:0000221,6.97e-17,44;CL:0000133,6.97e-17,44;CL:0002321,5.14e-10,70;CL:0000034,4.60e-08,97;CL:0000723,2.59e-07,91;CL:0000048,2.59e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!2.42e-14!11;UBERON:0002410!2.99e-13!9;UBERON:0000073!1.49e-08!75;UBERON:0001016!1.49e-08!75;UBERON:0001017!1.15e-07!73;UBERON:0005743!1.15e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0002410,6.73e-40,9;UBERON:0000010,1.62e-32,11;UBERON:0010313,3.76e-18,3;UBERON:0002342,3.76e-18,3;UBERON:0002005,3.76e-18,3;UBERON:0005428,3.76e-18,3;UBERON:0005062,3.76e-18,3;UBERON:0000013,9.33e-18,3;UBERON:0001017,1.55e-09,73;UBERON:0001016,3.09e-09,75;UBERON:0000011,1.84e-08,3;UBERON:0004121,6.21e-07,95;UBERON:0000924,6.21e-07,95;UBERON:0006601,6.21e-07,95|phase1_expression=0,0,0,0,0,0.16787927191189,0,0.516493293766305,0,0,0,0.558405112967355,0,0.262261207256992,0,0,0,0,0,0,1.27564935226605,0,0,0,0.22940928106717,1.14846392823004,0,0,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0.515672092277442,0.404632921719196,0,0,0,0,0,0,0.7104801149461,0,0,1.65903379693564,0.675029691658453,0,0,0.441737081903227,0.244981598429908,0.670918297127655,0.919218786610021,0,0.255374676170375,0.153606533256243,0.791317726381163,0.274462930807229,2.08365348222704,0,0,1.06958773443767,0.294628585473668,1.13897344639282,0.186399445825301,0.151452386666368,0.151143120213571,0.289864488701678,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32225283331772,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502518772325447,0,0.195133647857799,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,1.89304931649754,3.12350995437311,3.23135096599198,1.67278158566786,0.891194696329576,1.98153571552183,1.61924280669958,2.63030272120181,2.37172666767914,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0.216010681643603,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,1.25599399253266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0|short_description=p@chr9:65619254..65619257,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=114 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:65619254..65619257,- | |||
|id=chr9:65619254..65619257,- | |||
|ontology_enrichment_celltype=CL:0000540!1.13e-20!33;CL:0000047!1.13e-20!33;CL:0000031!1.13e-20!33;CL:0000404!1.13e-20!33;CL:0000221!8.89e-20!44;CL:0000133!8.89e-20!44;CL:0000393!2.69e-19!39;CL:0000211!2.69e-19!39;CL:0002319!4.05e-19!43;CL:0000055!8.46e-18!50;CL:0002321!1.09e-13!70;CL:0000220!1.09e-13!70;CL:0000107!2.99e-13!9;CL:0000117!5.81e-11!23;CL:0000337!5.81e-11!23;CL:0000548!4.93e-09!115;CL:0000004!4.93e-09!115;CL:0000255!4.93e-09!115;CL:0000144!1.43e-08!121;CL:0000012!1.43e-08!121;CL:0002371!1.65e-08!118;CL:0000034!2.29e-08!97;CL:0000723!4.07e-08!91;CL:0000048!4.07e-08!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,6.73e-40,9;CL:0000540,5.14e-23,33;CL:0000047,5.14e-23,33;CL:0000031,5.14e-23,33;CL:0000404,5.14e-23,33;CL:0000393,3.04e-19,39;CL:0000211,3.04e-19,39;CL:0002319,2.60e-17,43;CL:0000221,6.97e-17,44;CL:0000133,6.97e-17,44;CL:0002321,5.14e-10,70;CL:0000034,4.60e-08,97;CL:0000723,2.59e-07,91;CL:0000048,2.59e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!2.42e-14!11;UBERON:0002410!2.99e-13!9;UBERON:0000073!1.49e-08!75;UBERON:0001016!1.49e-08!75;UBERON:0001017!1.15e-07!73;UBERON:0005743!1.15e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,6.73e-40,9;UBERON:0000010,1.62e-32,11;UBERON:0010313,3.76e-18,3;UBERON:0002342,3.76e-18,3;UBERON:0002005,3.76e-18,3;UBERON:0005428,3.76e-18,3;UBERON:0005062,3.76e-18,3;UBERON:0000013,9.33e-18,3;UBERON:0001017,1.55e-09,73;UBERON:0001016,3.09e-09,75;UBERON:0000011,1.84e-08,3;UBERON:0004121,6.21e-07,95;UBERON:0000924,6.21e-07,95;UBERON:0006601,6.21e-07,95 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0.516493293766305,0,0,0,0.558405112967355,0,0.262261207256992,0,0,0,0,0,0,1.27564935226605,0,0,0,0.22940928106717,1.14846392823004,0,0,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0.515672092277442,0.404632921719196,0,0,0,0,0,0,0.7104801149461,0,0,1.65903379693564,0.675029691658453,0,0,0.441737081903227,0.244981598429908,0.670918297127655,0.919218786610021,0,0.255374676170375,0.153606533256243,0.791317726381163,0.274462930807229,2.08365348222704,0,0,1.06958773443767,0.294628585473668,1.13897344639282,0.186399445825301,0.151452386666368,0.151143120213571,0.289864488701678,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32225283331772,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502518772325447,0,0.195133647857799,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,1.89304931649754,3.12350995437311,3.23135096599198,1.67278158566786,0.891194696329576,1.98153571552183,1.61924280669958,2.63030272120181,2.37172666767914,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0.216010681643603,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,1.25599399253266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr9:65619254..65619257,- | |||
}} |
Revision as of 18:33, 14 September 2013
Short description: | p@chr9:65619254..65619257, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:65619254..65619257, - |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 6.73e-40 | 9 |
neuron | 5.14e-23 | 33 |
neuronal stem cell | 5.14e-23 | 33 |
neuroblast | 5.14e-23 | 33 |
electrically signaling cell | 5.14e-23 | 33 |
electrically responsive cell | 3.04e-19 | 39 |
electrically active cell | 3.04e-19 | 39 |
neural cell | 2.60e-17 | 43 |
ectodermal cell | 6.97e-17 | 44 |
neurectodermal cell | 6.97e-17 | 44 |
embryonic cell | 5.14e-10 | 70 |
stem cell | 4.60e-08 | 97 |
somatic stem cell | 2.59e-07 | 91 |
multi fate stem cell | 2.59e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 6.73e-40 | 9 |
peripheral nervous system | 1.62e-32 | 11 |
neural crest-derived structure | 3.76e-18 | 3 |
neural crest | 3.76e-18 | 3 |
enteric nervous system | 3.76e-18 | 3 |
vagal neural crest | 3.76e-18 | 3 |
neural fold | 3.76e-18 | 3 |
sympathetic nervous system | 9.33e-18 | 3 |
central nervous system | 1.55e-09 | 73 |
nervous system | 3.09e-09 | 75 |
parasympathetic nervous system | 1.84e-08 | 3 |
ectoderm-derived structure | 6.21e-07 | 95 |
ectoderm | 6.21e-07 | 95 |
presumptive ectoderm | 6.21e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.