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FFCP PHASE1:Mm9::chr8:124956824..124956846,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=13057|HGNC=|MCL_coexpression_id=116|UniProt=Q61462,B3VQI8|association_with_transcript=0bp_to_ENSMUST00000017604,NM_007806,uc009nsp.2,uc009nsq.2_5end|description=CAGE_peak_2_at_Cyba_5end|id=chr8:124956824..124956846,-|ontology_enrichment_celltype=CL:0000063!1.58e-08!66;CL:0000988!2.82e-07!32;CL:0002032!2.82e-07!32;CL:0000037!2.82e-07!32;CL:0000566!2.82e-07!32;CL:0000837!2.82e-07!32|ontology_enrichment_celltype_v019_2=CL:0000988,2.38e-07,32;CL:0002032,2.38e-07,32;CL:0000037,2.38e-07,32;CL:0000837,2.38e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.38e-11!48;UBERON:0002204!2.43e-11!32;UBERON:0002390!4.41e-10!45;UBERON:0003061!4.41e-10!45;UBERON:0001007!1.60e-09!128;UBERON:0001555!1.60e-09!128;UBERON:0007026!1.60e-09!128;UBERON:0004119!1.64e-09!130;UBERON:0000925!1.64e-09!130;UBERON:0006595!1.64e-09!130;UBERON:0000926!1.75e-09!193;UBERON:0004120!1.75e-09!193;UBERON:0006603!1.75e-09!193;UBERON:0005409!4.28e-09!59;UBERON:0004923!4.29e-09!24;UBERON:0003081!7.52e-09!88;UBERON:0004921!1.03e-08!126;UBERON:0004185!1.03e-08!126;UBERON:0002371!1.60e-08!16;UBERON:0000344!8.77e-08!15;UBERON:0001474!1.13e-07!22;UBERON:0004765!1.13e-07!22;UBERON:0001434!1.13e-07!22;UBERON:0000160!1.31e-07!43;UBERON:0002405!2.85e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.15e-11,48;UBERON:0002405,1.15e-11,48;UBERON:0002204,2.42e-11,32;UBERON:0002390,3.70e-10,45;UBERON:0003061,3.70e-10,45;UBERON:0005409,3.67e-09,47;UBERON:0004923,4.28e-09,24;UBERON:0001007,5.76e-09,116;UBERON:0001555,5.76e-09,116;UBERON:0007026,5.76e-09,116;UBERON:0004119,6.04e-09,118;UBERON:0000925,6.04e-09,118;UBERON:0006595,6.04e-09,118;UBERON:0003081,1.57e-08,87;UBERON:0002371,1.60e-08,16;UBERON:0004921,3.55e-08,114;UBERON:0000160,5.91e-08,31;UBERON:0000344,8.75e-08,15;UBERON:0001474,1.13e-07,22;UBERON:0004765,1.13e-07,22;UBERON:0001434,1.13e-07,22|phase1_expression=10.4096750618116,190.889547978731,180.634698037646,32.3636706098308,20.5367249278002,100.727563147134,94.6131194411879,71.0178278928669,20.695942156295,21.2998718953014,13.5262194898149,17.549874978974,51.5314197092929,53.5012862804264,23.3176833270964,18.627724599864,16.0899231969474,80.6005832490297,68.6943312364751,75.9657476718474,23.5569913718463,37.6312705051355,36.306770690312,105.115021775268,140.169070732041,279.0767345599,213.657950094901,155.13928753384,67.8383607459255,72.3326472411001,228.160695464309,0,0,0,34.9510459899042,38.7326723685287,27.7670324516822,518.142158852292,508.649309284994,431.38356503441,545.29058940475,523.212841478169,623.880803645032,38.1467358465999,45.518242117562,31.0194011153242,87.6278305669804,20.0583143870011,26.1426557454021,27.2201858703997,32.6168362387095,37.3756667348926,80.0323030895402,42.071004236658,33.2732861151039,35.2445427369247,62.1777564667102,50.0201929509119,1.61853168687678,2.11596391708813,1.90149421051854,50.4878352783007,41.7968554172235,604.7326100131,718.90584558619,698.401952992016,176.164864984822,127.944695672078,1.34796496001021,0.945041568321835,2.3135745748652,4.85606673486466,6.84692476950002,0.489963196859816,1.0543001812006,0.919218786610021,4.40463523997555,3.19218345212969,2.61131106535614,1.71452174049252,1.46380229763855,1.04182674111352,3.07101298901519,5.6276261003168,2.75036845998258,5.30331453852602,4.6982654663704,1.86399445825301,3.71058347332602,10.202160614416,22.3195656300292,18.9293252935905,0,1.61910957491345,1.94932925234301,0.896053774194671,16.0106638950197,3.57903677413921,5.19572009205738,3.5333957451034,8.73229202615419,0,0,0,41.1332977921307,45.3514159200426,40.4419556011827,25.2346374179123,56.7073965187306,14.6957717674177,9.1947223186052,13.3964810457342,10.8389283710347,10.7013074792362,8.81915303517786,8.04266184509923,50.6749683855466,9.9773556274739,68.9996230520902,10.8383789464764,22.5258348829601,18.9101348722737,33.550517019262,2.04946557908083,2.51336048176146,33.7203312875341,27.7971088853735,52.7914403274199,37.6127872136272,1.79748767285787,3.20250421973039,1.50785222535437,1.21677024134594,2.55715457330331,2.70124457927428,1.78465389374533,14.0538322113436,23.3885104746975,5.55990068554084,3.99839526184301,4.94457683258274,7.81667155073808,5.58192602396583,5.27466862425003,3.94611695077702,4.22775276940004,6.09061209638237,4.65666067330228,4.31135985865684,3.02569728268511,5.27853372491847,10.0830036916684,7.50727572909114,8.70630416305416,9.87754254758129,10.1507476077432,61.7947604835647,53.5283646798608,48.3077948972507,8.49215667395558,10.3191466391682,14.7650890398032,9.2330446878232,15.9379027715397,15.5809784016252,11.8592311822708,14.7550370769791,12.7274223180215,14.1521470925593,14.4467368389604,7.53939928776458,17.8363984658905,16.6858087621198,16.7758023450465,1.89260953707715,3.19004298375782,29.7376904685418,16.1314845664762,11.7308537794379,8.12828351511535,12.6290112095651,14.722897297504,21.1259141652627,25.6804595251955,28.4717436926707,32.9397909448022,29.6575546384318,33.6236437749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|EntrezGene=13057
|HGNC=
|MCL_coexpression_id=116
|UniProt=Q61462,B3VQI8
|association_with_transcript=0bp_to_ENSMUST00000017604,NM_007806,uc009nsp.2,uc009nsq.2_5end
|description=CAGE_peak_2_at_Cyba_5end
|id=chr8:124956824..124956846,-
|ontology_enrichment_celltype=CL:0000063!1.58e-08!66;CL:0000988!2.82e-07!32;CL:0002032!2.82e-07!32;CL:0000037!2.82e-07!32;CL:0000566!2.82e-07!32;CL:0000837!2.82e-07!32
|ontology_enrichment_celltype_v019_2=CL:0000988,2.38e-07,32;CL:0002032,2.38e-07,32;CL:0000037,2.38e-07,32;CL:0000837,2.38e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!1.38e-11!48;UBERON:0002204!2.43e-11!32;UBERON:0002390!4.41e-10!45;UBERON:0003061!4.41e-10!45;UBERON:0001007!1.60e-09!128;UBERON:0001555!1.60e-09!128;UBERON:0007026!1.60e-09!128;UBERON:0004119!1.64e-09!130;UBERON:0000925!1.64e-09!130;UBERON:0006595!1.64e-09!130;UBERON:0000926!1.75e-09!193;UBERON:0004120!1.75e-09!193;UBERON:0006603!1.75e-09!193;UBERON:0005409!4.28e-09!59;UBERON:0004923!4.29e-09!24;UBERON:0003081!7.52e-09!88;UBERON:0004921!1.03e-08!126;UBERON:0004185!1.03e-08!126;UBERON:0002371!1.60e-08!16;UBERON:0000344!8.77e-08!15;UBERON:0001474!1.13e-07!22;UBERON:0004765!1.13e-07!22;UBERON:0001434!1.13e-07!22;UBERON:0000160!1.31e-07!43;UBERON:0002405!2.85e-07!70
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.15e-11,48;UBERON:0002405,1.15e-11,48;UBERON:0002204,2.42e-11,32;UBERON:0002390,3.70e-10,45;UBERON:0003061,3.70e-10,45;UBERON:0005409,3.67e-09,47;UBERON:0004923,4.28e-09,24;UBERON:0001007,5.76e-09,116;UBERON:0001555,5.76e-09,116;UBERON:0007026,5.76e-09,116;UBERON:0004119,6.04e-09,118;UBERON:0000925,6.04e-09,118;UBERON:0006595,6.04e-09,118;UBERON:0003081,1.57e-08,87;UBERON:0002371,1.60e-08,16;UBERON:0004921,3.55e-08,114;UBERON:0000160,5.91e-08,31;UBERON:0000344,8.75e-08,15;UBERON:0001474,1.13e-07,22;UBERON:0004765,1.13e-07,22;UBERON:0001434,1.13e-07,22
|phase1_expression=10.4096750618116,190.889547978731,180.634698037646,32.3636706098308,20.5367249278002,100.727563147134,94.6131194411879,71.0178278928669,20.695942156295,21.2998718953014,13.5262194898149,17.549874978974,51.5314197092929,53.5012862804264,23.3176833270964,18.627724599864,16.0899231969474,80.6005832490297,68.6943312364751,75.9657476718474,23.5569913718463,37.6312705051355,36.306770690312,105.115021775268,140.169070732041,279.0767345599,213.657950094901,155.13928753384,67.8383607459255,72.3326472411001,228.160695464309,0,0,0,34.9510459899042,38.7326723685287,27.7670324516822,518.142158852292,508.649309284994,431.38356503441,545.29058940475,523.212841478169,623.880803645032,38.1467358465999,45.518242117562,31.0194011153242,87.6278305669804,20.0583143870011,26.1426557454021,27.2201858703997,32.6168362387095,37.3756667348926,80.0323030895402,42.071004236658,33.2732861151039,35.2445427369247,62.1777564667102,50.0201929509119,1.61853168687678,2.11596391708813,1.90149421051854,50.4878352783007,41.7968554172235,604.7326100131,718.90584558619,698.401952992016,176.164864984822,127.944695672078,1.34796496001021,0.945041568321835,2.3135745748652,4.85606673486466,6.84692476950002,0.489963196859816,1.0543001812006,0.919218786610021,4.40463523997555,3.19218345212969,2.61131106535614,1.71452174049252,1.46380229763855,1.04182674111352,3.07101298901519,5.6276261003168,2.75036845998258,5.30331453852602,4.6982654663704,1.86399445825301,3.71058347332602,10.202160614416,22.3195656300292,18.9293252935905,0,1.61910957491345,1.94932925234301,0.896053774194671,16.0106638950197,3.57903677413921,5.19572009205738,3.5333957451034,8.73229202615419,0,0,0,41.1332977921307,45.3514159200426,40.4419556011827,25.2346374179123,56.7073965187306,14.6957717674177,9.1947223186052,13.3964810457342,10.8389283710347,10.7013074792362,8.81915303517786,8.04266184509923,50.6749683855466,9.9773556274739,68.9996230520902,10.8383789464764,22.5258348829601,18.9101348722737,33.550517019262,2.04946557908083,2.51336048176146,33.7203312875341,27.7971088853735,52.7914403274199,37.6127872136272,1.79748767285787,3.20250421973039,1.50785222535437,1.21677024134594,2.55715457330331,2.70124457927428,1.78465389374533,14.0538322113436,23.3885104746975,5.55990068554084,3.99839526184301,4.94457683258274,7.81667155073808,5.58192602396583,5.27466862425003,3.94611695077702,4.22775276940004,6.09061209638237,4.65666067330228,4.31135985865684,3.02569728268511,5.27853372491847,10.0830036916684,7.50727572909114,8.70630416305416,9.87754254758129,10.1507476077432,61.7947604835647,53.5283646798608,48.3077948972507,8.49215667395558,10.3191466391682,14.7650890398032,9.2330446878232,15.9379027715397,15.5809784016252,11.8592311822708,14.7550370769791,12.7274223180215,14.1521470925593,14.4467368389604,7.53939928776458,17.8363984658905,16.6858087621198,16.7758023450465,1.89260953707715,3.19004298375782,29.7376904685418,16.1314845664762,11.7308537794379,8.12828351511535,12.6290112095651,14.722897297504,21.1259141652627,25.6804595251955,28.4717436926707,32.9397909448022,29.6575546384318,33.6236437749545,20.6661932346267,27.8634016682809,22.0460810872188,17.922714592893,19.7254616991205,12.7958334122896,12.3978509240388,19.1432248174595,27.5412531778029,24.5475369616115,31.9976877848742,36.9025369949005,54.7925560166398,64.5367167311017,4.74324203339438,8.67594549723689,8.25547779475453,11.0182435068578,12.9830477688642,17.6059326619264,25.2079593263606,21.8649064462616,34.5348033030825,15.1008777253445,12.9391385874619,23.4448797031157,13.7296576170407,7.32478746046624,5.20252499213545,4.82443521363367,28.6367444758237,9.28507917675375,7.00749398700711,10.0149600607361,8.91822943496308,13.2329943379034,15.4728366575909,14.2447562936193,14.029527825451,18.1601045511995,14.6698387164888,30.4785765371273,33.5008864819837,27.7726192476502,224.679013069516,218.106179211303,12.7858710984949,33.9402197954821,3.05046120976805,2.22702204525186,9.01642199571715,9.08895337935743,0.631016438832513,1.56175497718655,0.215423397732799,1.43381278771531,1.33679204449436,1.98153571552183,4.04810701674894,3.21481443702443,2.37172666767914,1.28528526568723,13.4843080947855,20.6556100254016,13.5196176263468,20.951205617512,17.2568679841952,16.9946445308487,16.6277956330613,20.1807435338811,19.489924930131,17.5238034328039,15.247269296925,21.8120237686503,24.241821730161,14.2216541071117,10.5418608574999,6.18813259489121,3.06395645178409,6.84232157318979,9.44318391614108,11.574199891706,6.91626911204867,10.3453914209201,8.72109809191241,16.1366423030738,11.0295702789944,14.8282449604674,4.41056796109924,6.76033637060068,9.04200789497071,3.92034012033013,5.84924485615369,2.62625439592098,40.8073171281791,2.78137953015765,47.502104861803,26.6239059672557,24.0752885580625,26.9366893516708,26.3819859501579,37.9771767522828,24.9868292090967,24.9113585136111,24.461395363383,14.3200592702267,6.01038387804157,13.419084830372,14.4727156701214,18.1906817532588,18.5608179184251,16.1837215661785,17.1919187908699,16.2288684030098,42.5137112397081,13.0481255748254,0.56369293868419,7.47582730219894,10.2584264083401,7.97249872210595,12.1410234069067,9.12363077650202,10.3274370008263,4.6873578543822,3.56521771047417,2.65742532908607,1.44015003128933,41.3974568022914,20.0697963137263,19.617792818482,22.3463815521807,20.4090433060929,21.6562676711579,26.3228034448732,26.1410463099002,22.2126189885925,25.6816938427349,26.7189390612627,28.360243295268,35.0211103570799,34.4786861435628,4.98806843953465,0.665957860122194,5.56225910978749,4.36500002546604,14.6824091464465,41.29014459926,35.1651118593149,9.64657705855796,5.517293144389,0.564751842617067,1.38097570952153,0.572895513439397,1.89038500578056,2.74033007908257,1.5107877947794,1.35004500046361,2.70192721934532,0.453142408984205,0.51776031175182,0.93408612825759,3.59122386060928,7.68301225893604,8.0225216632537,4.61148957781561,10.4790799816508,10.8900896622791,8.85950746127245,9.62757628775446,9.8551912587881,8.11133759648767,7.54505365544305,10.7687733590365,8.51534526984761,9.41941690872058,7.1444053692461,7.3007125345259,6.75182271622968,7.82963211526283,8.24313952752625,9.25746981440622,8.34136288948886,10.0143199777875,10.61028841416,9.41093804153306,10.5768259864596,8.96347067076586,8.68130047744881,9.37048385536446,6.17256498823512,6.76219603307793,7.68334962529395,6.95692773388472,10.2258315182738,9.25951732709479,7.49431733813838,10.0590591631526,9.88406848622172,11.8598765882683,13.8972594045295,17.1582198359112
|short_description=p2@Cyba
}}

Revision as of 15:01, 14 September 2013

Short description:p2@Cyba
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cyba_5end
Coexpression cluster:MCL_coexpression_mm9:116
Association with transcript: 0bp_to_ENSMUST00000017604, NM_007806, uc009nsp.2, uc009nsq.2_5end
EntrezGene:Cyba
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cyba

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5190.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6180.63
CD326+ enterocyte, pool1.CNhs13542.11848-124I332.36
CD326+ enterocyte, pool2.CNhs13197.11849-124I420.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7100.73
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I894.61
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E971.02
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E720.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F221.30
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E613.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F117.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E451.53
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E853.50
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A123.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A318.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A280.60
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A468.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A675.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A323.56
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H237.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I936.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1105.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2140.17
GP2+ M cell, pool1.CNhs13228.11845-124H9279.08
GP2+ M cell, pool2.CNhs13231.11846-124I1213.66
GP2+ M cell, pool3.CNhs13240.11847-124I2155.14
Ileum epithelium, pool1.CNhs13199.10252-104B967.84
Ileum epithelium, pool2.CNhs13232.10253-104C172.33
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8228.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F534.95
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F638.73
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F727.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8518.14
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1508.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3431.38
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9545.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2523.21
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4623.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D838.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D945.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B331.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B787.63
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.06
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B826.14
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C327.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C432.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C437.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A280.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I942.07
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A133.27
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C135.24
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E162.18
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C550.02
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C650.49
Mouse Meningeal cells, donor3.CNhs12109.11639-122D141.80
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7604.73
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7718.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2698.40
Mouse Microglia, donor1.CNhs12629.11718-123C8176.16
Mouse Microglia, donor2.CNhs12634.11736-123E8127.94
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D93.71
Mouse Schwann, donor2.CNhs12573.11746-123F910.20
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G322.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.93
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A716.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.73
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G141.13
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G245.35
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G340.44
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B625.23
accessory axillary lymph node, adult.CNhs10475.1063-29H956.71
adrenal gland, adult.CNhs10508.49-24D714.70
adrenal gland, embryo E14.CNhs11038.406-44C59.19
adrenal gland, embryo E16.CNhs11004.1254-43D613.40
adrenal gland, embryo E17.CNhs11043.1263-45I110.84
adrenal gland, embryo E18.CNhs11026.1262-18F510.70
adrenal gland, neonate N00.CNhs11191.1311-23C18.82
adrenal gland, neonate N25.CNhs11223.1377-27I38.04
amnion, adult pregnant day17.5.CNhs10488.583-22A850.67
aorta, adult.CNhs10498.46-23H19.98
bone (os femoris), adult.CNhs10483.56-12G269.00
bone (os femoris), neonate N02.CNhs11227.1985-43F510.84
bone (os femoris), neonate N16.CNhs11225.1525-43A622.53
bone (os femoris), neonate N20.CNhs11195.1350-25C318.91
cecum, adult.CNhs10467.37-13H433.55
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H733.72
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C727.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D152.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D437.61
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.05
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A223.39
epididymis, adult.CNhs10490.58-23B25.56
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C64.94
eyeball, embryo E14.CNhs10521.399-16E27.82
eyeball, embryo E15.CNhs10593.426-16C95.58
eyeball, embryo E17.CNhs11023.1261-18D45.27
eyeball, neonate N00.CNhs11207.633-15C63.95
eyeball, neonate N01.CNhs11140.1532-43E74.23
eyeball, neonate N02.CNhs11205.1551-44G86.09
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E24.31
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E25.28
forelimb, embryo E14.CNhs10577.413-26A810.08
forelimb, embryo E15.CNhs11007.437-20E77.51
forelimb, embryo E17.CNhs10598.1517-43C48.71
forelimb, embryo E18.CNhs11008.1520-43B59.88
gonad, embryo E13.CNhs11044.1564-45I610.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C861.79
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D253.53
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D548.31
heart, embryo E11.CNhs10586.331-24E98.49
heart, embryo E12.CNhs11015.353-12F510.32
heart, embryo E13.CNhs11013.376-3I914.77
heart, embryo E14.CNhs10597.403-26D49.23
heart, embryo E15.CNhs11017.431-16C815.94
heart, embryo E16.CNhs11021.457-17C615.58
heart, embryo E17.CNhs11025.479-18E511.86
heart, embryo E18.CNhs11030.1283-20G314.76
heart, neonate N00.CNhs11213.639-21E312.73
heart, neonate N03.CNhs11221.1349-25I214.15
heart, neonate N10.CNhs11118.749-24G114.45
heart, neonate N16.CNhs11209.782-15G17.54
heart, neonate N20.CNhs11127.821-26I617.84
heart, neonate N25.CNhs11196.1351-25D316.69
heart, neonate N30.CNhs11202.1390-42D216.78
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I329.74
intestine, adult.CNhs10496.178-9A316.13
intestine, embryo E12.CNhs11019.1251-16I511.73
intestine, embryo E13.CNhs11010.381-16D58.13
intestine, embryo E15.CNhs10602.976-16D812.63
intestine, embryo E16.CNhs10585.463-22H414.72
intestine, embryo E17.CNhs10582.482-18D321.13
intestine, embryo E18.CNhs10526.1289-20F725.68
intestine, neonate N00.CNhs11126.644-26D128.47
intestine, neonate N01.CNhs11192.1322-23E932.94
intestine, neonate N06.CNhs11102.688-20B829.66
intestine, neonate N07.CNhs11095.720-20F233.62
intestine, neonate N10.CNhs11098.755-23A520.67
intestine, neonate N20.CNhs11187.827-18D127.86
intestine, neonate N25.CNhs11121.1352-25E322.05
intestine, neonate N30.CNhs11131.1384-42G117.92
kidney, embryo E14.CNhs10606.411-4I919.73
kidney, embryo E15.CNhs10997.434-16F812.80
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I219.14
kidney, embryo E18.CNhs11001.1288-20C727.54
kidney, neonate N00.CNhs11214.646-21G724.55
kidney, neonate N10.CNhs11206.758-6D532.00
kidney, neonate N20.CNhs11113.832-19I136.90
kidney, neonate N25.CNhs11122.1353-25F354.79
kidney, neonate N30.CNhs11203.1385-42H164.54
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F88.68
liver, embryo E13.CNhs10524.378-3H68.26
liver, embryo E14.CNhs10594.409-16E111.02
liver, embryo E15.CNhs10520.433-16D712.98
liver, embryo E16.CNhs10523.462-17F517.61
liver, embryo E17.CNhs10510.481-18A325.21
liver, embryo E18.CNhs10579.499-43G421.86
liver, neonate N00.CNhs11117.641-24F434.53
liver, neonate N03.CNhs11123.1345-25G215.10
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H223.44
liver, neonate N10.CNhs11115.751-24B913.73
liver, neonate N20.CNhs11220.823-25A37.32
liver, neonate N25.CNhs11198.1368-26H15.20
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B128.64
lung, embryo E12.CNhs10522.354-16G29.29
lung, embryo E14.CNhs10604.404-26F87.01
lung, embryo E15.CNhs11020.432-17C510.01
lung, embryo E16.CNhs10998.458-17B68.92
lung, embryo E17.CNhs10605.480-44A613.23
lung, embryo E18.CNhs10583.1287-20I615.47
lung, neonate N00.CNhs11224.640-42C614.24
lung, neonate N06.CNhs11212.683-20E514.03
lung, neonate N07.CNhs11111.715-19A318.16
lung, neonate N10.CNhs11219.750-23E614.67
lung, neonate N20.CNhs11109.822-18A430.48
lung, neonate N25.CNhs11119.1359-25C733.50
lung, neonate N30.CNhs11133.1394-42H227.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1224.68
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1218.11
mammary gland, adult lactating day02.CNhs10480.595-22B612.79
mammary gland, adult pregnant day19.CNhs10476.588-5H233.94
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.02
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.09
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I713.48
ovary, embryo E18.CNhs11040.505-44H720.66
ovary, neonate N00.CNhs11217.1299-22I413.52
oviduct, adult pregnant day01.CNhs10500.988-6G620.95
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F416.99
pancreas, embryo E15.CNhs11042.1556-45F216.63
pancreas, embryo E16.CNhs11003.460-26E520.18
pancreas, embryo E17.CNhs10599.1558-45G319.49
pancreas, embryo E18.CNhs10580.1535-43I717.52
pancreas, neonate N00.CNhs11105.645-26G915.25
pancreas, neonate N01.CNhs11138.1531-43D721.81
pancreas, neonate N02.CNhs11139.1539-43D824.24
pancreas, neonate N16.CNhs11136.787-43B614.22
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E66.84
pituitary gland, embryo E13.CNhs11009.370-44C79.44
pituitary gland, embryo E14.CNhs11037.398-44A511.57
pituitary gland, embryo E15.CNhs10592.427-16B96.92
pituitary gland, embryo E16.CNhs11036.449-43F610.35
pituitary gland, embryo E17.CNhs11039.1265-44F58.72
pituitary gland, neonate N00.CNhs11190.1308-22E916.14
placenta, adult pregnant day10.CNhs10472.539-13I711.03
placenta, adult pregnant day17.CNhs10464.577-18G314.83
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C36.76
skin, neonate N00.CNhs11124.650-25G49.04
skin, neonate N03.CNhs11215.662-22H33.92
skin, neonate N06.CNhs11097.693-20I55.85
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I140.81
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G247.50
spleen, embryo E16.CNhs11035.461-43C126.62
spleen, embryo E18.CNhs11011.1271-21F224.08
spleen, neonate N10.CNhs11116.752-24D126.94
spleen, neonate N20.CNhs11112.824-19H126.38
spleen, neonate N25.CNhs11099.1354-25G337.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C624.99
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C924.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D324.46
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E36.01
stomach, embryo E15.CNhs10603.1252-16G813.42
stomach, embryo E16.CNhs11022.459-17D414.47
stomach, embryo E17.CNhs11006.1035-18D518.19
stomach, embryo E18.CNhs10999.1286-20C618.56
stomach, neonate N03.CNhs11193.1340-24B816.18
stomach, neonate N07.CNhs11210.718-18A917.19
stomach, neonate N25.CNhs11104.1355-25E416.23
stomach, neonate N30.CNhs11134.1386-42I142.51
submandibular gland, adult.CNhs10469.59-29C113.05
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F57.48
testis, embryo E15.CNhs11034.443-27C510.26
testis, embryo E16.CNhs11033.470-26G57.97
testis, embryo E17.CNhs11029.486-18I512.14
testis, embryo E18.CNhs11027.503-18G59.12
testis, neonate N00.CNhs11189.1300-22B710.33
testis, neonate N07.CNhs11222.726-26I44.69
testis, neonate N10.CNhs11204.763-44D93.57
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B541.40
thymus, embryo E14.CNhs11041.402-44I420.07
thymus, embryo E15.CNhs11005.430-45I219.62
thymus, embryo E16.CNhs11002.456-26C522.35
thymus, embryo E17.CNhs10581.478-18C120.41
thymus, embryo E18.CNhs10595.1273-19G421.66
thymus, neonate N02.CNhs11181.1541-43F826.32
thymus, neonate N03.CNhs11137.2104-43C726.14
thymus, neonate N06.CNhs11197.681-26C422.21
thymus, neonate N07.CNhs11211.713-19D325.68
thymus, neonate N10.CNhs11194.748-24E426.72
thymus, neonate N20.CNhs11186.820-7A228.36
thymus, neonate N25.CNhs11125.1362-25G735.02
thymus, neonate N30.CNhs11132.1393-42G234.48
tongue, adult.CNhs10499.32-1B44.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.56
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.37
urinary bladder, adult.CNhs10481.879-12E414.68
uterus, adult pregnant day19.CNhs10497.590-15F541.29
uterus, adult.CNhs10509.92-27E535.17
vagina, adult.CNhs10502.89-27D59.65
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H27.68
whole body, embryo E14.5.CNhs10578.420-27D28.02
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F210.48
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.86
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.55
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.77
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.42
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.30
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.96
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.37
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.76
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.23
whole body, embryo E17.5.CNhs10513.490-9F99.26
whole body, embryo E17.CNhs10517.475-3I57.49
whole body, embryo E18.CNhs10516.493-3B310.06
whole body, neonate N00.CNhs10525.657-19C29.88
whole body, neonate N01.CNhs10576.659-23C611.86
whole body, neonate N06.CNhs10515.692-21D113.90
whole body, neonate N10.CNhs10518.761-6B417.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.15e-1148
immune system1.15e-1148
musculoskeletal system2.42e-1132
hematopoietic system3.70e-1045
blood island3.70e-1045
gastrointestinal system3.67e-0947
organ component layer4.28e-0924
digestive system5.76e-09116
digestive tract5.76e-09116
primitive gut5.76e-09116
endoderm-derived structure6.04e-09118
endoderm6.04e-09118
presumptive endoderm6.04e-09118
lateral plate mesoderm1.57e-0887
bone marrow1.60e-0816
subdivision of digestive tract3.55e-08114
intestine5.91e-0831
mucosa8.75e-0815
bone element1.13e-0722
skeletal element1.13e-0722
skeletal system1.13e-0722







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