FFCP PHASE1:Mm9::chr7:50890020..50890033,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72431|HGNC=|MCL_coexpression_id=191|UniProt=Q9D871|association_with_transcript=-75bp_to_ENSMUST00000032663,NM_028236,uc009gnf.1_5end|description=CAGE_peak_2_at_Ceacam18_5end|id=chr7:50890020..50890033,+|ontology_enrichment_celltype=CL:0000239!8.92e-14!6;CL:0000677!8.92e-14!6;CL:0000212!8.92e-14!6;CL:0000584!8.92e-14!6;CL:0000075!1.09e-11!7;CL:0002563!6.69e-09!9;CL:0002251!6.69e-09!9;CL:0000473!5.00e-08!3;CL:0000627!5.00e-08!3;CL:0000682!5.00e-08!3|ontology_enrichment_celltype_v019_2=CL:0000239,1.84e-19,6;CL:0000677,1.84e-19,6;CL:0000584,1.84e-19,6;CL:0000075,1.33e-16,7;CL:0002563,8.80e-13,9;CL:0002251,8.80e-13,9;CL:0000682,4.86e-11,3;CL:0000066,1.97e-09,25;CL:0002076,2.02e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.90e-20!43;UBERON:0000344!2.22e-20!15;UBERON:0005409!3.75e-16!59;UBERON:0001242!4.07e-16!13;UBERON:0000060!4.07e-16!13;UBERON:0001262!4.07e-16!13;UBERON:0004786!4.07e-16!13;UBERON:0004923!8.24e-16!24;UBERON:0004119!8.33e-14!130;UBERON:0000925!8.33e-14!130;UBERON:0006595!8.33e-14!130;UBERON:0001007!4.60e-12!128;UBERON:0001555!4.60e-12!128;UBERON:0007026!4.60e-12!128;UBERON:0004921!3.57e-10!126;UBERON:0004185!3.57e-10!126;UBERON:0003350!6.69e-09!9;UBERON:0004808!6.69e-09!9;UBERON:0001277!6.69e-09!9;UBERON:0000331!3.40e-07!3;UBERON:0002116!3.40e-07!3;UBERON:0001204!3.40e-07!3;UBERON:0001168!3.40e-07!3;UBERON:0000485!3.96e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.91e-38,31;UBERON:0000344,2.43e-25,15;UBERON:0005409,1.51e-23,47;UBERON:0001242,2.52e-19,13;UBERON:0001262,2.52e-19,13;UBERON:0004786,2.52e-19,13;UBERON:0004923,4.81e-15,24;UBERON:0003350,8.80e-13,9;UBERON:0004808,8.80e-13,9;UBERON:0001277,8.80e-13,9;UBERON:0000485,2.39e-10,11;UBERON:0001007,2.29e-09,116;UBERON:0001555,2.29e-09,116;UBERON:0007026,2.29e-09,116;UBERON:0004119,3.92e-09,118;UBERON:0000925,3.92e-09,118;UBERON:0006595,3.92e-09,118;UBERON:0001962,2.90e-08,2;UBERON:0001961,2.90e-08,2;UBERON:0001744,2.90e-08,2;UBERON:0002108,6.74e-08,4;UBERON:0004921,2.35e-07,114|phase1_expression=0,88.6397535403977,65.0648912327037,6.65421264875026,1.00179145989269,8.2260843236826,8.41005506143892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,98.0753551723583,77.0815184385691,33.3054539186712,21.5380998079537,25.6410766896208,3.6104449696711,0.504060259519861,9.75614246883341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.0662692946624,22.4782981664013,0,0,0,0,0,0,3.79623249235609,1.15289268306808,1.25667604400135,1.39269530428806,1.16978452271472,3.59527763461689,6.91641759599022,4.18196673834171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.63549621259146,0,0,0,0,0,0,8.16146342563582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0.288635524920988,0.116876902181569,0,0,0,0,0,1.12609485270709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Ceacam18}} | ||
|EntrezGene=72431 | |||
|HGNC= | |||
|MCL_coexpression_id=191 | |||
|UniProt=Q9D871 | |||
|association_with_transcript=-75bp_to_ENSMUST00000032663,NM_028236,uc009gnf.1_5end | |||
|description=CAGE_peak_2_at_Ceacam18_5end | |||
|id=chr7:50890020..50890033,+ | |||
|ontology_enrichment_celltype=CL:0000239!8.92e-14!6;CL:0000677!8.92e-14!6;CL:0000212!8.92e-14!6;CL:0000584!8.92e-14!6;CL:0000075!1.09e-11!7;CL:0002563!6.69e-09!9;CL:0002251!6.69e-09!9;CL:0000473!5.00e-08!3;CL:0000627!5.00e-08!3;CL:0000682!5.00e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.84e-19,6;CL:0000677,1.84e-19,6;CL:0000584,1.84e-19,6;CL:0000075,1.33e-16,7;CL:0002563,8.80e-13,9;CL:0002251,8.80e-13,9;CL:0000682,4.86e-11,3;CL:0000066,1.97e-09,25;CL:0002076,2.02e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.90e-20!43;UBERON:0000344!2.22e-20!15;UBERON:0005409!3.75e-16!59;UBERON:0001242!4.07e-16!13;UBERON:0000060!4.07e-16!13;UBERON:0001262!4.07e-16!13;UBERON:0004786!4.07e-16!13;UBERON:0004923!8.24e-16!24;UBERON:0004119!8.33e-14!130;UBERON:0000925!8.33e-14!130;UBERON:0006595!8.33e-14!130;UBERON:0001007!4.60e-12!128;UBERON:0001555!4.60e-12!128;UBERON:0007026!4.60e-12!128;UBERON:0004921!3.57e-10!126;UBERON:0004185!3.57e-10!126;UBERON:0003350!6.69e-09!9;UBERON:0004808!6.69e-09!9;UBERON:0001277!6.69e-09!9;UBERON:0000331!3.40e-07!3;UBERON:0002116!3.40e-07!3;UBERON:0001204!3.40e-07!3;UBERON:0001168!3.40e-07!3;UBERON:0000485!3.96e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.91e-38,31;UBERON:0000344,2.43e-25,15;UBERON:0005409,1.51e-23,47;UBERON:0001242,2.52e-19,13;UBERON:0001262,2.52e-19,13;UBERON:0004786,2.52e-19,13;UBERON:0004923,4.81e-15,24;UBERON:0003350,8.80e-13,9;UBERON:0004808,8.80e-13,9;UBERON:0001277,8.80e-13,9;UBERON:0000485,2.39e-10,11;UBERON:0001007,2.29e-09,116;UBERON:0001555,2.29e-09,116;UBERON:0007026,2.29e-09,116;UBERON:0004119,3.92e-09,118;UBERON:0000925,3.92e-09,118;UBERON:0006595,3.92e-09,118;UBERON:0001962,2.90e-08,2;UBERON:0001961,2.90e-08,2;UBERON:0001744,2.90e-08,2;UBERON:0002108,6.74e-08,4;UBERON:0004921,2.35e-07,114 | |||
|phase1_expression=0,88.6397535403977,65.0648912327037,6.65421264875026,1.00179145989269,8.2260843236826,8.41005506143892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,98.0753551723583,77.0815184385691,33.3054539186712,21.5380998079537,25.6410766896208,3.6104449696711,0.504060259519861,9.75614246883341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.0662692946624,22.4782981664013,0,0,0,0,0,0,3.79623249235609,1.15289268306808,1.25667604400135,1.39269530428806,1.16978452271472,3.59527763461689,6.91641759599022,4.18196673834171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.63549621259146,0,0,0,0,0,0,8.16146342563582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0.288635524920988,0.116876902181569,0,0,0,0,0,1.12609485270709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Ceacam18 | |||
}} |
Revision as of 13:32, 14 September 2013
Short description: | p2@Ceacam18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ceacam18_5end |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | -75bp_to_ENSMUST00000032663, NM_028236, uc009gnf.1_5end |
EntrezGene: | Ceacam18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.84e-19 | 6 |
gut absorptive cell | 1.84e-19 | 6 |
enterocyte | 1.84e-19 | 6 |
columnar/cuboidal epithelial cell | 1.33e-16 | 7 |
intestinal epithelial cell | 8.80e-13 | 9 |
epithelial cell of alimentary canal | 8.80e-13 | 9 |
M cell of gut | 4.86e-11 | 3 |
epithelial cell | 1.97e-09 | 25 |
endo-epithelial cell | 2.02e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.91e-38 | 31 |
mucosa | 2.43e-25 | 15 |
gastrointestinal system | 1.51e-23 | 47 |
intestinal mucosa | 2.52e-19 | 13 |
wall of intestine | 2.52e-19 | 13 |
gastrointestinal system mucosa | 2.52e-19 | 13 |
organ component layer | 4.81e-15 | 24 |
epithelium of mucosa | 8.80e-13 | 9 |
gastrointestinal system epithelium | 8.80e-13 | 9 |
intestinal epithelium | 8.80e-13 | 9 |
simple columnar epithelium | 2.39e-10 | 11 |
digestive system | 2.29e-09 | 116 |
digestive tract | 2.29e-09 | 116 |
primitive gut | 2.29e-09 | 116 |
endoderm-derived structure | 3.92e-09 | 118 |
endoderm | 3.92e-09 | 118 |
presumptive endoderm | 3.92e-09 | 118 |
gut-associated lymphoid tissue | 2.90e-08 | 2 |
mucosa-associated lymphoid tissue | 2.90e-08 | 2 |
lymphoid tissue | 2.90e-08 | 2 |
small intestine | 6.74e-08 | 4 |
subdivision of digestive tract | 2.35e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.