FFCP PHASE1:Mm9::chr14:70224655..70224666,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=246710|HGNC=|MCL_coexpression_id=320|UniProt=Q3TBD8|association_with_transcript=0bp_to_uc007umx.1_5end|description=CAGE_peak_13_at_Rhobtb2_5end|id=chr14:70224655..70224666,-|ontology_enrichment_celltype=CL:0000553!1.44e-07!6;CL:0000556!1.44e-07!6|ontology_enrichment_celltype_v019_2=CL:0000553,1.00e-12,6;CL:0000556,1.00e-12,6;CL:0002031,1.86e-11,25;CL:0000945,3.65e-09,1;CL:0000236,3.65e-09,1;CL:0000826,3.65e-09,1;CL:0000988,6.59e-09,32;CL:0002032,6.59e-09,32;CL:0000037,6.59e-09,32;CL:0000837,6.59e-09,32;CL:0000050,1.11e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.39e-11!48;UBERON:0002405!1.13e-09!70;UBERON:0002390!1.77e-08!45;UBERON:0003061!1.77e-08!45;UBERON:0004177!1.38e-07!29;UBERON:0002106!2.88e-07!6;UBERON:0004457!2.88e-07!6;UBERON:0000042!2.88e-07!6;UBERON:0004854!2.88e-07!6;UBERON:0009034!2.88e-07!6;UBERON:0002095!2.88e-07!6;UBERON:0004782!2.88e-07!6;UBERON:0003281!2.88e-07!6;UBERON:0009664!2.88e-07!6;UBERON:0002296!2.88e-07!6;UBERON:0005602!2.88e-07!6;UBERON:0001179!2.88e-07!6;UBERON:0006293!2.88e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.48e-12,6;UBERON:0004457,2.48e-12,6;UBERON:0000042,2.48e-12,6;UBERON:0004854,2.48e-12,6;UBERON:0009034,2.48e-12,6;UBERON:0002095,2.48e-12,6;UBERON:0004782,2.48e-12,6;UBERON:0003281,2.48e-12,6;UBERON:0009664,2.48e-12,6;UBERON:0002296,2.48e-12,6;UBERON:0005602,2.48e-12,6;UBERON:0001179,2.48e-12,6;UBERON:0006293,2.48e-12,6;UBERON:0000029,9.82e-10,1;UBERON:0001097,9.82e-10,1;UBERON:0003968,9.82e-10,1;UBERON:0001467,9.82e-10,1;UBERON:0002193,8.34e-08,48;UBERON:0002405,8.34e-08,48;UBERON:0003887,1.24e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,0.607425802169478,0,4.41647031501533,5.89592064504677,1.69755860719212,0.0850432901510698,3.97163804803541,4.4403964153619,0.319984845586813,0.45881856213434,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51673909086605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,10.0985774622397,0,0,0,0,0,0,0,0,0,2.65383165584962,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.746441823660558,0,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0.380451252225118,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0.655453258862952,0.518054945597687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,3.58828849675491,0,0.370389054739423,0.753473828018764,1.36694227721025,2.51655990527175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.948033361884535,0,0.205421914329655,0.129920822977795,0,0,0,0,0.403865799792591,0.228620419965,0.403304740547362,0.682205165178267,0.673482891482306,0.350630706544707,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421|short_description=p13@Rhobtb2}} | ||
|EntrezGene=246710 | |||
|HGNC= | |||
|MCL_coexpression_id=320 | |||
|UniProt=Q3TBD8 | |||
|association_with_transcript=0bp_to_uc007umx.1_5end | |||
|description=CAGE_peak_13_at_Rhobtb2_5end | |||
|id=chr14:70224655..70224666,- | |||
|ontology_enrichment_celltype=CL:0000553!1.44e-07!6;CL:0000556!1.44e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.00e-12,6;CL:0000556,1.00e-12,6;CL:0002031,1.86e-11,25;CL:0000945,3.65e-09,1;CL:0000236,3.65e-09,1;CL:0000826,3.65e-09,1;CL:0000988,6.59e-09,32;CL:0002032,6.59e-09,32;CL:0000037,6.59e-09,32;CL:0000837,6.59e-09,32;CL:0000050,1.11e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.39e-11!48;UBERON:0002405!1.13e-09!70;UBERON:0002390!1.77e-08!45;UBERON:0003061!1.77e-08!45;UBERON:0004177!1.38e-07!29;UBERON:0002106!2.88e-07!6;UBERON:0004457!2.88e-07!6;UBERON:0000042!2.88e-07!6;UBERON:0004854!2.88e-07!6;UBERON:0009034!2.88e-07!6;UBERON:0002095!2.88e-07!6;UBERON:0004782!2.88e-07!6;UBERON:0003281!2.88e-07!6;UBERON:0009664!2.88e-07!6;UBERON:0002296!2.88e-07!6;UBERON:0005602!2.88e-07!6;UBERON:0001179!2.88e-07!6;UBERON:0006293!2.88e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.48e-12,6;UBERON:0004457,2.48e-12,6;UBERON:0000042,2.48e-12,6;UBERON:0004854,2.48e-12,6;UBERON:0009034,2.48e-12,6;UBERON:0002095,2.48e-12,6;UBERON:0004782,2.48e-12,6;UBERON:0003281,2.48e-12,6;UBERON:0009664,2.48e-12,6;UBERON:0002296,2.48e-12,6;UBERON:0005602,2.48e-12,6;UBERON:0001179,2.48e-12,6;UBERON:0006293,2.48e-12,6;UBERON:0000029,9.82e-10,1;UBERON:0001097,9.82e-10,1;UBERON:0003968,9.82e-10,1;UBERON:0001467,9.82e-10,1;UBERON:0002193,8.34e-08,48;UBERON:0002405,8.34e-08,48;UBERON:0003887,1.24e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,0.607425802169478,0,4.41647031501533,5.89592064504677,1.69755860719212,0.0850432901510698,3.97163804803541,4.4403964153619,0.319984845586813,0.45881856213434,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51673909086605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,10.0985774622397,0,0,0,0,0,0,0,0,0,2.65383165584962,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.746441823660558,0,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0.380451252225118,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0.655453258862952,0.518054945597687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,3.58828849675491,0,0.370389054739423,0.753473828018764,1.36694227721025,2.51655990527175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.948033361884535,0,0.205421914329655,0.129920822977795,0,0,0,0,0.403865799792591,0.228620419965,0.403304740547362,0.682205165178267,0.673482891482306,0.350630706544707,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p13@Rhobtb2 | |||
}} |
Revision as of 02:57, 13 September 2013
Short description: | p13@Rhobtb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Rhobtb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:320 |
Association with transcript: | 0bp_to_uc007umx.1_5end |
EntrezGene: | Rhobtb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.00e-12 | 6 |
megakaryocyte | 1.00e-12 | 6 |
hematopoietic lineage restricted progenitor cell | 1.86e-11 | 25 |
lymphocyte of B lineage | 3.65e-09 | 1 |
B cell | 3.65e-09 | 1 |
pro-B cell | 3.65e-09 | 1 |
hematopoietic cell | 6.59e-09 | 32 |
hematopoietic oligopotent progenitor cell | 6.59e-09 | 32 |
hematopoietic stem cell | 6.59e-09 | 32 |
hematopoietic multipotent progenitor cell | 6.59e-09 | 32 |
megakaryocyte-erythroid progenitor cell | 1.11e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.48e-12 | 6 |
cavity lining | 2.48e-12 | 6 |
serous membrane | 2.48e-12 | 6 |
gastrointestinal system mesentery | 2.48e-12 | 6 |
stomach region | 2.48e-12 | 6 |
mesentery | 2.48e-12 | 6 |
gastrointestinal system serosa | 2.48e-12 | 6 |
mesentery of stomach | 2.48e-12 | 6 |
gut mesentery | 2.48e-12 | 6 |
dorsal mesentery | 2.48e-12 | 6 |
dorsal mesogastrium | 2.48e-12 | 6 |
peritoneal cavity | 2.48e-12 | 6 |
spleen primordium | 2.48e-12 | 6 |
lymph node | 9.82e-10 | 1 |
axillary lymph node | 9.82e-10 | 1 |
peripheral lymph node | 9.82e-10 | 1 |
shoulder | 9.82e-10 | 1 |
hemolymphoid system | 8.34e-08 | 48 |
immune system | 8.34e-08 | 48 |
intraembryonic coelom | 1.24e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.