FFCP PHASE1:Mm9::chr11:76292618..76292629,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:76292618..76292629,-|id=chr11:76292618..76292629,-|ontology_enrichment_celltype=CL:0000239!1.09e-10!6;CL:0000677!1.09e-10!6;CL:0000212!1.09e-10!6;CL:0000584!1.09e-10!6;CL:0000075!5.31e-09!7;CL:0002563!9.38e-07!9;CL:0002251!9.38e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,2.15e-16,6;CL:0000677,2.15e-16,6;CL:0000584,2.15e-16,6;CL:0000075,5.08e-14,7;CL:0000682,4.27e-12,3;CL:0002563,7.52e-11,9;CL:0002251,7.52e-11,9;CL:0000066,6.85e-09,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.73e-18!43;UBERON:0000344!4.47e-15!15;UBERON:0001242!2.19e-12!13;UBERON:0000060!2.19e-12!13;UBERON:0001262!2.19e-12!13;UBERON:0004786!2.19e-12!13;UBERON:0005409!1.77e-11!59;UBERON:0004923!3.64e-08!24;UBERON:0003350!9.38e-07!9;UBERON:0004808!9.38e-07!9;UBERON:0001277!9.38e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.39e-32,31;UBERON:0000344,3.14e-29,15;UBERON:0001242,3.57e-23,13;UBERON:0001262,3.57e-23,13;UBERON:0004786,3.57e-23,13;UBERON:0005409,1.93e-20,47;UBERON:0004923,1.50e-17,24;UBERON:0002108,1.23e-15,4;UBERON:0000331,3.29e-12,3;UBERON:0002116,3.29e-12,3;UBERON:0001204,3.29e-12,3;UBERON:0001168,3.29e-12,3;UBERON:0003350,7.52e-11,9;UBERON:0004808,7.52e-11,9;UBERON:0001277,7.52e-11,9;UBERON:0000485,7.91e-09,11;UBERON:0001007,2.15e-08,116;UBERON:0001555,2.15e-08,116;UBERON:0007026,2.15e-08,116;UBERON:0004119,3.43e-08,118;UBERON:0000925,3.43e-08,118;UBERON:0006595,3.43e-08,118;UBERON:0001962,5.81e-08,2;UBERON:0001961,5.81e-08,2;UBERON:0001744,5.81e-08,2|phase1_expression=0,9.42233600626275,12.2849794635175,8.77146212789807,9.5170188689806,0.671517087647559,1.16806320297763,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,1.59992422793407,2.75291137280604,5.7423196411502,5.1691439539089,5.817723282519,6.08074942260396,7.30887376303799,4.8780712344167,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,8.92130714056255,9.52022039988759,0.213288250535234,0,0,0,0,0.190225626112559,4.2707615539006,1.15289268306808,0.251335208800269,0.198956472041151,0.19496408711912,5.39291645192533,3.8904848977445,4.18196673834171,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983528546038072,0,0,0,0.163934945376675,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0.775284879504663,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,5.24665505933731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0.171853182343688,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr11:76292618..76292629,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:76292618..76292629,- | |||
|id=chr11:76292618..76292629,- | |||
|ontology_enrichment_celltype=CL:0000239!1.09e-10!6;CL:0000677!1.09e-10!6;CL:0000212!1.09e-10!6;CL:0000584!1.09e-10!6;CL:0000075!5.31e-09!7;CL:0002563!9.38e-07!9;CL:0002251!9.38e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.15e-16,6;CL:0000677,2.15e-16,6;CL:0000584,2.15e-16,6;CL:0000075,5.08e-14,7;CL:0000682,4.27e-12,3;CL:0002563,7.52e-11,9;CL:0002251,7.52e-11,9;CL:0000066,6.85e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.73e-18!43;UBERON:0000344!4.47e-15!15;UBERON:0001242!2.19e-12!13;UBERON:0000060!2.19e-12!13;UBERON:0001262!2.19e-12!13;UBERON:0004786!2.19e-12!13;UBERON:0005409!1.77e-11!59;UBERON:0004923!3.64e-08!24;UBERON:0003350!9.38e-07!9;UBERON:0004808!9.38e-07!9;UBERON:0001277!9.38e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.39e-32,31;UBERON:0000344,3.14e-29,15;UBERON:0001242,3.57e-23,13;UBERON:0001262,3.57e-23,13;UBERON:0004786,3.57e-23,13;UBERON:0005409,1.93e-20,47;UBERON:0004923,1.50e-17,24;UBERON:0002108,1.23e-15,4;UBERON:0000331,3.29e-12,3;UBERON:0002116,3.29e-12,3;UBERON:0001204,3.29e-12,3;UBERON:0001168,3.29e-12,3;UBERON:0003350,7.52e-11,9;UBERON:0004808,7.52e-11,9;UBERON:0001277,7.52e-11,9;UBERON:0000485,7.91e-09,11;UBERON:0001007,2.15e-08,116;UBERON:0001555,2.15e-08,116;UBERON:0007026,2.15e-08,116;UBERON:0004119,3.43e-08,118;UBERON:0000925,3.43e-08,118;UBERON:0006595,3.43e-08,118;UBERON:0001962,5.81e-08,2;UBERON:0001961,5.81e-08,2;UBERON:0001744,5.81e-08,2 | |||
|phase1_expression=0,9.42233600626275,12.2849794635175,8.77146212789807,9.5170188689806,0.671517087647559,1.16806320297763,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,1.59992422793407,2.75291137280604,5.7423196411502,5.1691439539089,5.817723282519,6.08074942260396,7.30887376303799,4.8780712344167,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,8.92130714056255,9.52022039988759,0.213288250535234,0,0,0,0,0.190225626112559,4.2707615539006,1.15289268306808,0.251335208800269,0.198956472041151,0.19496408711912,5.39291645192533,3.8904848977445,4.18196673834171,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983528546038072,0,0,0,0.163934945376675,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0.775284879504663,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,5.24665505933731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0.171853182343688,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:76292618..76292629,- | |||
}} |
Revision as of 20:57, 12 September 2013
Short description: | p@chr11:76292618..76292629, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:76292618..76292629, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.15e-16 | 6 |
gut absorptive cell | 2.15e-16 | 6 |
enterocyte | 2.15e-16 | 6 |
columnar/cuboidal epithelial cell | 5.08e-14 | 7 |
M cell of gut | 4.27e-12 | 3 |
intestinal epithelial cell | 7.52e-11 | 9 |
epithelial cell of alimentary canal | 7.52e-11 | 9 |
epithelial cell | 6.85e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.39e-32 | 31 |
mucosa | 3.14e-29 | 15 |
intestinal mucosa | 3.57e-23 | 13 |
wall of intestine | 3.57e-23 | 13 |
gastrointestinal system mucosa | 3.57e-23 | 13 |
gastrointestinal system | 1.93e-20 | 47 |
organ component layer | 1.50e-17 | 24 |
small intestine | 1.23e-15 | 4 |
ileal mucosa | 3.29e-12 | 3 |
ileum | 3.29e-12 | 3 |
mucosa of small intestine | 3.29e-12 | 3 |
wall of small intestine | 3.29e-12 | 3 |
epithelium of mucosa | 7.52e-11 | 9 |
gastrointestinal system epithelium | 7.52e-11 | 9 |
intestinal epithelium | 7.52e-11 | 9 |
simple columnar epithelium | 7.91e-09 | 11 |
digestive system | 2.15e-08 | 116 |
digestive tract | 2.15e-08 | 116 |
primitive gut | 2.15e-08 | 116 |
endoderm-derived structure | 3.43e-08 | 118 |
endoderm | 3.43e-08 | 118 |
presumptive endoderm | 3.43e-08 | 118 |
gut-associated lymphoid tissue | 5.81e-08 | 2 |
mucosa-associated lymphoid tissue | 5.81e-08 | 2 |
lymphoid tissue | 5.81e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.