FFCP PHASE1:Mm9::chr8:77540157..77540170,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70823|HGNC=|MCL_coexpression_id=97|UniProt=Q8BTT5|association_with_transcript=0bp_to_uc009mgz.1_5end|description=CAGE_peak_3_at_Hmgxb4_5end|id=chr8:77540157..77540170,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,1.17e-38,3;CL:0000351,1.17e-38,3;CL:0000068,1.58e-37,3;CL:0002202,1.58e-37,3;CL:0000069,1.58e-37,3;CL:0002632,1.58e-37,3;CL:0002368,1.58e-37,3;CL:0000307,1.58e-37,3;CL:0000377,1.58e-37,3;CL:0002076,4.04e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!8.55e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.17e-38,3;UBERON:0000307,1.17e-38,3;UBERON:0007010,1.17e-38,3;UBERON:0003126,1.58e-37,3;UBERON:0001005,1.58e-37,3;UBERON:0007196,1.58e-37,3;UBERON:0001558,1.58e-37,3;UBERON:0005178,3.08e-07,17;UBERON:0005181,3.08e-07,17;UBERON:0002224,3.08e-07,17;UBERON:0000915,3.08e-07,17;UBERON:0008947,3.08e-07,17;UBERON:0003258,3.08e-07,17|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,3.46385665617943,1.77351905832569,4.04419556011827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0.834141747676794,0,0,0.398068533636986,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0,0,0.425820255624806,0,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.839708713941948,0.552799895217695,0,0.474503990371703,0,0.108005340821801,0,0.87345025498471,0.134864346384821,0,0,0,0,0,1.04661582230785,0.827292452285488,0.194451188344048,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.205421914329655,0,0,0,0.360586348559907,0.295379054349154,0,0.228620419965,0,0.0974578807397524,0.288635524920988,0.701261413089414,0.453460767230423,38.6255558870873,40.2815216176546,27.868846316437,0,0,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0.429742108096597,0,0,0|short_description=p3@Hmgxb4}} | ||
|EntrezGene=70823 | |||
|HGNC= | |||
|MCL_coexpression_id=97 | |||
|UniProt=Q8BTT5 | |||
|association_with_transcript=0bp_to_uc009mgz.1_5end | |||
|description=CAGE_peak_3_at_Hmgxb4_5end | |||
|id=chr8:77540157..77540170,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.17e-38,3;CL:0000351,1.17e-38,3;CL:0000068,1.58e-37,3;CL:0002202,1.58e-37,3;CL:0000069,1.58e-37,3;CL:0002632,1.58e-37,3;CL:0002368,1.58e-37,3;CL:0000307,1.58e-37,3;CL:0000377,1.58e-37,3;CL:0002076,4.04e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!8.55e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.17e-38,3;UBERON:0000307,1.17e-38,3;UBERON:0007010,1.17e-38,3;UBERON:0003126,1.58e-37,3;UBERON:0001005,1.58e-37,3;UBERON:0007196,1.58e-37,3;UBERON:0001558,1.58e-37,3;UBERON:0005178,3.08e-07,17;UBERON:0005181,3.08e-07,17;UBERON:0002224,3.08e-07,17;UBERON:0000915,3.08e-07,17;UBERON:0008947,3.08e-07,17;UBERON:0003258,3.08e-07,17 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,3.46385665617943,1.77351905832569,4.04419556011827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0.834141747676794,0,0,0.398068533636986,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0,0,0.425820255624806,0,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.839708713941948,0.552799895217695,0,0.474503990371703,0,0.108005340821801,0,0.87345025498471,0.134864346384821,0,0,0,0,0,1.04661582230785,0.827292452285488,0.194451188344048,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.205421914329655,0,0,0,0.360586348559907,0.295379054349154,0,0.228620419965,0,0.0974578807397524,0.288635524920988,0.701261413089414,0.453460767230423,38.6255558870873,40.2815216176546,27.868846316437,0,0,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0.429742108096597,0,0,0 | |||
|short_description=p3@Hmgxb4 | |||
}} |
Revision as of 16:06, 14 September 2013
Short description: | p3@Hmgxb4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hmgxb4_5end |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | 0bp_to_uc009mgz.1_5end |
EntrezGene: | Hmgxb4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.17e-38 | 3 |
trophoblast cell | 1.17e-38 | 3 |
duct epithelial cell | 1.58e-37 | 3 |
epithelial cell of tracheobronchial tree | 1.58e-37 | 3 |
branched duct epithelial cell | 1.58e-37 | 3 |
epithelial cell of lower respiratory tract | 1.58e-37 | 3 |
respiratory epithelial cell | 1.58e-37 | 3 |
tracheal epithelial cell | 1.58e-37 | 3 |
tracheoblast | 1.58e-37 | 3 |
endo-epithelial cell | 4.04e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.17e-38 | 3 |
blastula | 1.17e-38 | 3 |
cleaving embryo | 1.17e-38 | 3 |
trachea | 1.58e-37 | 3 |
respiratory airway | 1.58e-37 | 3 |
tracheobronchial tree | 1.58e-37 | 3 |
lower respiratory tract | 1.58e-37 | 3 |
thoracic cavity element | 3.08e-07 | 17 |
thoracic segment organ | 3.08e-07 | 17 |
thoracic cavity | 3.08e-07 | 17 |
thoracic segment of trunk | 3.08e-07 | 17 |
respiratory primordium | 3.08e-07 | 17 |
endoderm of foregut | 3.08e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.