FFCP PHASE1:Mm9::chr6:122708844..122708876,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:122708844..122708876,-|id=chr6:122708844..122708876,-|ontology_enrichment_celltype=CL:0000355!5.18e-07!9|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=DOID:0060100!6.21e-20!3;DOID:4045!6.21e-20!3;DOID:0050686!2.88e-10!6|ontology_enrichment_disease_v019_2=DOID:0060100,7.15e-11,3;DOID:4045,7.15e-11,3|ontology_enrichment_uberon=UBERON:0001134!5.18e-07!9;UBERON:0002036!5.18e-07!9;UBERON:0002385!5.18e-07!9;UBERON:0000486!5.18e-07!9;UBERON:0001015!5.18e-07!9;UBERON:0004290!5.18e-07!9;UBERON:0003082!5.18e-07!9|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0.7813353445238,0.523523743973798,41.764435650202,2.73218193983378,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958520996047362,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849892149969277,0.419854356970974,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:122708844..122708876,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:122708844..122708876,- | |||
|id=chr6:122708844..122708876,- | |||
|ontology_enrichment_celltype=CL:0000355!5.18e-07!9 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease=DOID:0060100!6.21e-20!3;DOID:4045!6.21e-20!3;DOID:0050686!2.88e-10!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.15e-11,3;DOID:4045,7.15e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0001134!5.18e-07!9;UBERON:0002036!5.18e-07!9;UBERON:0002385!5.18e-07!9;UBERON:0000486!5.18e-07!9;UBERON:0001015!5.18e-07!9;UBERON:0004290!5.18e-07!9;UBERON:0003082!5.18e-07!9 | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr6:122708844..122708876,- | |||
}} | |||
Revision as of 08:47, 14 September 2013
| Short description: | p@chr6:122708844..122708876, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr6:122708844..122708876, - |
| Coexpression cluster: | MCL_coexpression_mm9:6 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system cancer | 7.15e-11 | 3 |
| muscle cancer | 7.15e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
