FFCP PHASE1:Mm9::chr6:56664885..56664945,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=78937|HGNC=|MCL_coexpression_id=587|UniProt=Q80U56|association_with_transcript=0bp_to_ENSMUST00000031805,NM_030235,uc009cbk.2,uc009cbl.2_5end|description=CAGE_peak_1_at_Avl9_5end|id=chr6:56664885..56664945,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.49e-09!43;UBERON:0000064!1.41e-08!99;UBERON:0007023!1.08e-07!51;UBERON:0000344!3.50e-07!15;UBERON:0004119!8.27e-07!130;UBERON:0000925!8.27e-07!130;UBERON:0006595!8.27e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.08e-10,31;UBERON:0007023,1.08e-07,51;UBERON:0000344,3.50e-07,15;UBERON:0005409,9.81e-07,47|phase1_expression=23.2215828301951,54.091188184101,61.4248973175874,87.4121570676739,86.1540655507717,31.7291823913472,32.9393823239691,36.2836538870829,50.8247286967517,42.1316147379588,24.4841694562472,20.0228119078294,41.7729781032142,41.5246911490238,12.3250611871795,15.5905955890166,15.3903613188192,37.5399976776303,45.659106390711,35.6487307510345,14.3723160355308,16.1844250457443,18.0227854505865,30.7185451763341,26.3820673227246,45.9385571292016,36.6147696735214,37.2765232546588,38.5747541496439,42.3410617996684,24.6120866827388,10.1604907753541,10.4561013889377,15.8481681015439,22.8192779603507,13.4650062740379,18.1710727073509,57.3388334109564,35.9414258480948,45.5465657257204,67.6466211235666,67.6215030108861,54.8626698925204,18.1291417884831,16.6258167200004,18.5382219683298,11.7358701652206,3.2703773457067,3.51497892375155,8.74934545834275,4.89952475688769,2.87505128729943,63.7573903019398,41.3456420946466,51.0862574696545,10.0331180054019,12.0344044774278,16.5015069528782,14.7691016427506,12.1667925232568,7.60597684207415,3.04960078862219,1.77858959222228,4.49949858640699,4.94433181283487,4.9733608046227,2.69640099466564,0.768436610643109,27.996195323289,19.4408551197635,23.9770455940576,9.14083150092171,8.1721360152097,20.7009450673272,17.0604938412461,11.9498442259303,13.2139057199266,19.7915374032041,19.6616362567992,17.4089899803856,15.0954611943976,19.2737947106001,9.77140496504833,15.1945904708554,19.8637722109853,12.9636577608414,14.3795397607094,14.911955666024,10.9045718399785,12.4693074176196,35.6533321103064,22.371020801516,4.75979933595425,15.6513925574967,11.0461990966104,16.1289679355041,12.9208866521212,7.15807354827843,3.37721805983729,2.47337702157238,27.323623436676,14.115912515575,7.64415719119937,0,16.6698101578635,16.9751109868316,15.6712577954583,17.8126852361734,34.1798006414267,16.0317510190011,8.15381035800839,9.43842982767638,10.6083128737787,12.9621470875255,19.4021366773913,16.4623234641875,45.7310690308592,14.3153363350713,18.5768215909474,6.14714029800155,11.2629174414801,15.0311328471919,29.8226817948995,21.3729981818429,18.0124167859571,27.3339049073193,21.9261677845834,18.5969846607956,26.4306072311975,20.9706895166752,27.9075367719362,26.6387226479273,27.2904182701874,22.2472447877388,22.0255327233134,24.9851545124347,17.0071737630028,21.2735919743259,34.3702951469798,30.5140691035387,10.2795149940536,13.104419952708,13.1445354757905,16.4268251440929,18.6420007674638,18.0640345601638,17.5222224926693,20.9549730298603,11.2095356325078,12.4810012910761,11.7887253189846,7.89104636739269,9.45360647367033,10.7958171621872,8.0255033199098,10.1507476077432,12.6398373716382,11.8380037272769,17.6181369625267,9.52778553663309,9.85009451920604,10.0834754418168,9.2330446878232,11.4123254413494,10.4901636763417,6.97601834251224,7.51165523918934,10.6256461554124,7.73431294593358,7.38753588355929,7.94474333549386,5.84799949701329,6.80605357402257,8.32079796314305,21.6598647021051,27.0639130557518,48.5715610986183,21.4204958997471,13.650448034255,13.237490296045,14.6908905907186,20.1683524623343,24.2392067790909,28.3436182907713,25.6245693234036,32.9397909448022,32.4222419352348,34.4194696631191,30.0244694163445,28.7622210769351,36.743468478698,43.0145150229433,6.44870863240478,11.5390997735826,16.9061603509621,10.5898690479563,11.4431967428899,17.5339549725796,16.5047361894312,19.4845395333075,21.351826986427,20.8541207027843,10.3758419480502,10.0107063429656,10.614185736113,11.2431056192427,9.53442570525964,8.20002343158217,10.6942857748196,15.8232875597946,16.5377931310536,8.23684239564244,24.4405951096503,16.3742016974142,10.9213185590096,16.1650481886152,12.3784215330119,19.2977408545347,21.8008764396594,8.90609635321278,12.2223732331519,9.67546988918572,9.85699042811709,20.2682571504597,18.091316707337,22.0501022079313,17.8127712839996,19.4888926890922,14.6698387164888,17.8611013040154,21.0675677876393,23.4331474902049,18.0949540727127,16.3171705145613,13.277635371514,21.5230662117691,22.9587343682543,26.8414762296145,10.4918365041072,8.83648245215305,8.20321370482267,11.3227235846025,12.0637102730367,12.6653462914853,11.8083297263669,11.3230612315533,14.9779959619711,11.6902343164525,13.4397844501818,24.4204200480573,22.9942938037395,6.58842733568844,19.7093220817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| ||
|EntrezGene=78937 | |||
|HGNC= | |||
|MCL_coexpression_id=587 | |||
|UniProt=Q80U56 | |||
|association_with_transcript=0bp_to_ENSMUST00000031805,NM_030235,uc009cbk.2,uc009cbl.2_5end | |||
|description=CAGE_peak_1_at_Avl9_5end | |||
|id=chr6:56664885..56664945,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.49e-09!43;UBERON:0000064!1.41e-08!99;UBERON:0007023!1.08e-07!51;UBERON:0000344!3.50e-07!15;UBERON:0004119!8.27e-07!130;UBERON:0000925!8.27e-07!130;UBERON:0006595!8.27e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.08e-10,31;UBERON:0007023,1.08e-07,51;UBERON:0000344,3.50e-07,15;UBERON:0005409,9.81e-07,47 | |||
|phase1_expression=23.2215828301951,54.091188184101,61.4248973175874,87.4121570676739,86.1540655507717,31.7291823913472,32.9393823239691,36.2836538870829,50.8247286967517,42.1316147379588,24.4841694562472,20.0228119078294,41.7729781032142,41.5246911490238,12.3250611871795,15.5905955890166,15.3903613188192,37.5399976776303,45.659106390711,35.6487307510345,14.3723160355308,16.1844250457443,18.0227854505865,30.7185451763341,26.3820673227246,45.9385571292016,36.6147696735214,37.2765232546588,38.5747541496439,42.3410617996684,24.6120866827388,10.1604907753541,10.4561013889377,15.8481681015439,22.8192779603507,13.4650062740379,18.1710727073509,57.3388334109564,35.9414258480948,45.5465657257204,67.6466211235666,67.6215030108861,54.8626698925204,18.1291417884831,16.6258167200004,18.5382219683298,11.7358701652206,3.2703773457067,3.51497892375155,8.74934545834275,4.89952475688769,2.87505128729943,63.7573903019398,41.3456420946466,51.0862574696545,10.0331180054019,12.0344044774278,16.5015069528782,14.7691016427506,12.1667925232568,7.60597684207415,3.04960078862219,1.77858959222228,4.49949858640699,4.94433181283487,4.9733608046227,2.69640099466564,0.768436610643109,27.996195323289,19.4408551197635,23.9770455940576,9.14083150092171,8.1721360152097,20.7009450673272,17.0604938412461,11.9498442259303,13.2139057199266,19.7915374032041,19.6616362567992,17.4089899803856,15.0954611943976,19.2737947106001,9.77140496504833,15.1945904708554,19.8637722109853,12.9636577608414,14.3795397607094,14.911955666024,10.9045718399785,12.4693074176196,35.6533321103064,22.371020801516,4.75979933595425,15.6513925574967,11.0461990966104,16.1289679355041,12.9208866521212,7.15807354827843,3.37721805983729,2.47337702157238,27.323623436676,14.115912515575,7.64415719119937,0,16.6698101578635,16.9751109868316,15.6712577954583,17.8126852361734,34.1798006414267,16.0317510190011,8.15381035800839,9.43842982767638,10.6083128737787,12.9621470875255,19.4021366773913,16.4623234641875,45.7310690308592,14.3153363350713,18.5768215909474,6.14714029800155,11.2629174414801,15.0311328471919,29.8226817948995,21.3729981818429,18.0124167859571,27.3339049073193,21.9261677845834,18.5969846607956,26.4306072311975,20.9706895166752,27.9075367719362,26.6387226479273,27.2904182701874,22.2472447877388,22.0255327233134,24.9851545124347,17.0071737630028,21.2735919743259,34.3702951469798,30.5140691035387,10.2795149940536,13.104419952708,13.1445354757905,16.4268251440929,18.6420007674638,18.0640345601638,17.5222224926693,20.9549730298603,11.2095356325078,12.4810012910761,11.7887253189846,7.89104636739269,9.45360647367033,10.7958171621872,8.0255033199098,10.1507476077432,12.6398373716382,11.8380037272769,17.6181369625267,9.52778553663309,9.85009451920604,10.0834754418168,9.2330446878232,11.4123254413494,10.4901636763417,6.97601834251224,7.51165523918934,10.6256461554124,7.73431294593358,7.38753588355929,7.94474333549386,5.84799949701329,6.80605357402257,8.32079796314305,21.6598647021051,27.0639130557518,48.5715610986183,21.4204958997471,13.650448034255,13.237490296045,14.6908905907186,20.1683524623343,24.2392067790909,28.3436182907713,25.6245693234036,32.9397909448022,32.4222419352348,34.4194696631191,30.0244694163445,28.7622210769351,36.743468478698,43.0145150229433,6.44870863240478,11.5390997735826,16.9061603509621,10.5898690479563,11.4431967428899,17.5339549725796,16.5047361894312,19.4845395333075,21.351826986427,20.8541207027843,10.3758419480502,10.0107063429656,10.614185736113,11.2431056192427,9.53442570525964,8.20002343158217,10.6942857748196,15.8232875597946,16.5377931310536,8.23684239564244,24.4405951096503,16.3742016974142,10.9213185590096,16.1650481886152,12.3784215330119,19.2977408545347,21.8008764396594,8.90609635321278,12.2223732331519,9.67546988918572,9.85699042811709,20.2682571504597,18.091316707337,22.0501022079313,17.8127712839996,19.4888926890922,14.6698387164888,17.8611013040154,21.0675677876393,23.4331474902049,18.0949540727127,16.3171705145613,13.277635371514,21.5230662117691,22.9587343682543,26.8414762296145,10.4918365041072,8.83648245215305,8.20321370482267,11.3227235846025,12.0637102730367,12.6653462914853,11.8083297263669,11.3230612315533,14.9779959619711,11.6902343164525,13.4397844501818,24.4204200480573,22.9942938037395,6.58842733568844,19.7093220817827,26.7251599215507,17.2568679841952,8.01176099311439,12.09294227859,15.6542216197395,10.6308681437078,24.2873766875703,31.2698234733548,21.8120237686503,18.1813662976208,13.9056173491759,30.5713964867496,22.6898195146011,20.0859367394735,12.0640933000978,7.63216234318252,16.5039516974326,22.3448694389265,20.155676389034,17.4421961838248,11.2652031172402,19.2430800612242,23.513359865884,35.7256004849038,11.3771514529621,16.6308359496783,10.072258463002,10.9822556482886,13.459553779095,29.4395644996149,25.7741169794608,13.1570578214347,8.66824845445534,10.1856990053341,8.09984365120171,12.1657862671712,11.2101304871196,30.596117398894,34.5680087239435,30.8185941583865,13.3653886522116,12.3371037496643,16.8755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| |||
|short_description=p1@Avl9 | |||
}} | |||
Revision as of 10:22, 14 September 2013
| Short description: | p1@Avl9 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Avl9_5end |
| Coexpression cluster: | MCL_coexpression_mm9:587 |
| Association with transcript: | 0bp_to_ENSMUST00000031805, NM_030235, uc009cbk.2, uc009cbl.2_5end |
| EntrezGene: | Avl9 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestine | 1.08e-10 | 31 |
| adult organism | 1.08e-07 | 51 |
| mucosa | 3.50e-07 | 15 |
| gastrointestinal system | 9.81e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
