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FFCP PHASE1:Mm9::chr19:28085485..28085544,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=19726|HGNC=|UniProt=G5E890,P48381|association_with_transcript=0bp_to_ENSMUST00000046898,ENSMUST00000172907_5end|description=CAGE_peak_5_at_Rfx3_5end|id=chr19:28085485..28085544,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.80e-15!63;UBERON:0000153!2.07e-15!94;UBERON:0007811!4.31e-14!86;UBERON:0003056!6.95e-14!49;UBERON:0000955!1.77e-13!50;UBERON:0006238!1.77e-13!50;UBERON:0002616!7.25e-13!49;UBERON:0001049!2.68e-12!52;UBERON:0005068!2.68e-12!52;UBERON:0006241!2.68e-12!52;UBERON:0007135!2.68e-12!52;UBERON:0003080!9.32e-12!40;UBERON:0002780!2.65e-11!39;UBERON:0001890!2.65e-11!39;UBERON:0006240!2.65e-11!39;UBERON:0002346!5.34e-11!71;UBERON:0003075!5.34e-11!71;UBERON:0007284!5.34e-11!71;UBERON:0001017!1.14e-08!73;UBERON:0005743!1.14e-08!73;UBERON:0000073!9.39e-08!75;UBERON:0001016!9.39e-08!75;UBERON:0002791!1.31e-07!29;UBERON:0003528!1.31e-07!29;UBERON:0001893!1.31e-07!29;UBERON:0002020!1.89e-07!34;UBERON:0004121!1.92e-07!102;UBERON:0000924!1.92e-07!102;UBERON:0006601!1.92e-07!102;UBERON:0002021!4.01e-07!10;UBERON:0000411!4.01e-07!10;UBERON:0001950!4.01e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.16e-14,49;UBERON:0002346,6.15e-13,64;UBERON:0003075,6.15e-13,64;UBERON:0007284,6.15e-13,64;UBERON:0000955,1.01e-12,47;UBERON:0006238,1.01e-12,47;UBERON:0000073,1.22e-12,54;UBERON:0001049,3.21e-12,52;UBERON:0005068,3.21e-12,52;UBERON:0006241,3.21e-12,52;UBERON:0007135,3.21e-12,52;UBERON:0002616,4.12e-12,46;UBERON:0003080,7.29e-12,40;UBERON:0010371,1.10e-11,73;UBERON:0002780,2.09e-11,39;UBERON:0001890,2.09e-11,39;UBERON:0006240,2.09e-11,39;UBERON:0010314,1.54e-09,92;UBERON:0001017,1.95e-08,73;UBERON:0004121,4.35e-08,95;UBERON:0000924,4.35e-08,95;UBERON:0006601,4.35e-08,95;UBERON:0003528,1.13e-07,29;UBERON:0002791,1.13e-07,29;UBERON:0001893,1.13e-07,29;UBERON:0001016,1.77e-07,75;UBERON:0002020,1.89e-07,34;UBERON:0002021,3.50e-07,10;UBERON:0000411,3.50e-07,10;UBERON:0001950,3.50e-07,10|phase1_expression=6.24580503708696,1.39590163055744,0,0.60492842261366,0,1.17515490338323,2.33612640595526,5.4231795845462,2.111830832275,3.5109678948299,0.34243593645101,0.319088635981346,13.1824562047028,15.1237296184865,0.999329285446988,0.607425802169478,2.09868563438444,5.0473946457318,5.75880621144103,6.36584477697045,10.4603246885816,2.18440092641948,1.56719873483361,0.639969691173627,0,0,0,0.861884930743556,0,0.252030129759931,0.443461021310609,0,0.61506478758457,0,0,0.166234645358492,0.204169356262369,3.34825304589526,0.7813353445238,3.14114246384279,2.94115744015507,2.73218193983378,1.45653105909346,0.125896817975577,0.304130793658544,0.183546752161682,0.782391344348039,3.2703773457067,1.31811709640683,2.3331587888914,2.37976916763116,0,2.51673909086605,6.5282592781021,10.4189077734164,0.257259436035947,0.286533439938757,0,3.43937983461316,3.70293685490423,0.633831403506179,0.338844532069132,0,0,0,0,0.599200221036809,2.30530983192933,3.31806759387129,1.08004750665353,1.68259969081106,0.571301968807607,1.76694832761291,3.55223317723367,4.31304619582064,1.83843757322004,3.30347642998166,6.12899222808901,7.68032666281217,3.56092976871523,5.58074625974699,5.73004707612436,3.35019598801657,3.93933827022176,9.93188610549266,7.07108605136802,6.54909731675874,4.84638559145781,0.302904773332736,0.604572480854284,2.89864488701678,0,0,0,0,0.896053774194671,3.23022166303029,0,0,0.35333957451034,5.0703631119605,1.28326477414318,0,0,0,0,0,2.39786147410026,12.9468941823586,2.82040064223167,1.38788261412909,1.21786191324856,0.691846491768175,2.26083960828934,6.58496759959947,0.502666365318702,3.21353458054686,2.60278842455841,2.65383165584962,1.94120219936891,0.883366073841574,1.93950101254089,0,13.1751358655196,10.8912287542997,3.0654846625031,5.87094110079009,2.39961092397363,4.19331749341113,7.63932260964596,11.8950156732843,9.1727677042391,15.1227158567281,12.5300574091862,10.1816141834184,9.5722345209977,4.88828946481518,2.61254638281195,1.76905930903572,3.15662783829711,5.85541993332167,3.90833577536904,4.50155324513373,6.63101198477146,9.11689088627793,5.63700369253339,4.96619140166563,5.43277078551933,3.44908788692548,4.72765200419548,2.46331573829528,2.84954452155847,5.56094498451196,4.87553033131033,4.7329891373827,4.37875387000685,7.72434506044558,3.3455227924913,1.70498099637356,5.38527008592305,3.51789089971644,3.24111710629827,4.7348947117042,5.50939848892731,3.5481435964097,2.79040733700489,4.29237442239391,3.97002164048376,3.12663714835613,2.79084688934462,2.35099547682982,1.31579988682799,1.75640092232841,2.14730270016595,43.5300193527743,22.0215870491669,1.98251269790279,0.793351699990633,4.05247676016945,4.64473343720877,2.57734922644187,1.81515172161008,1.55664630691409,1.52180500890047,1.89811624617805,2.14108641141214,2.26201687920243,4.17808591286417,2.53453313254856,1.79763881730844,1.51296634912286,0.199141273254367,1.32767530667157,2.51346727741403,2.2541547134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|EntrezGene=19726
|HGNC=
|UniProt=G5E890,P48381
|association_with_transcript=0bp_to_ENSMUST00000046898,ENSMUST00000172907_5end
|description=CAGE_peak_5_at_Rfx3_5end
|id=chr19:28085485..28085544,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.80e-15!63;UBERON:0000153!2.07e-15!94;UBERON:0007811!4.31e-14!86;UBERON:0003056!6.95e-14!49;UBERON:0000955!1.77e-13!50;UBERON:0006238!1.77e-13!50;UBERON:0002616!7.25e-13!49;UBERON:0001049!2.68e-12!52;UBERON:0005068!2.68e-12!52;UBERON:0006241!2.68e-12!52;UBERON:0007135!2.68e-12!52;UBERON:0003080!9.32e-12!40;UBERON:0002780!2.65e-11!39;UBERON:0001890!2.65e-11!39;UBERON:0006240!2.65e-11!39;UBERON:0002346!5.34e-11!71;UBERON:0003075!5.34e-11!71;UBERON:0007284!5.34e-11!71;UBERON:0001017!1.14e-08!73;UBERON:0005743!1.14e-08!73;UBERON:0000073!9.39e-08!75;UBERON:0001016!9.39e-08!75;UBERON:0002791!1.31e-07!29;UBERON:0003528!1.31e-07!29;UBERON:0001893!1.31e-07!29;UBERON:0002020!1.89e-07!34;UBERON:0004121!1.92e-07!102;UBERON:0000924!1.92e-07!102;UBERON:0006601!1.92e-07!102;UBERON:0002021!4.01e-07!10;UBERON:0000411!4.01e-07!10;UBERON:0001950!4.01e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.16e-14,49;UBERON:0002346,6.15e-13,64;UBERON:0003075,6.15e-13,64;UBERON:0007284,6.15e-13,64;UBERON:0000955,1.01e-12,47;UBERON:0006238,1.01e-12,47;UBERON:0000073,1.22e-12,54;UBERON:0001049,3.21e-12,52;UBERON:0005068,3.21e-12,52;UBERON:0006241,3.21e-12,52;UBERON:0007135,3.21e-12,52;UBERON:0002616,4.12e-12,46;UBERON:0003080,7.29e-12,40;UBERON:0010371,1.10e-11,73;UBERON:0002780,2.09e-11,39;UBERON:0001890,2.09e-11,39;UBERON:0006240,2.09e-11,39;UBERON:0010314,1.54e-09,92;UBERON:0001017,1.95e-08,73;UBERON:0004121,4.35e-08,95;UBERON:0000924,4.35e-08,95;UBERON:0006601,4.35e-08,95;UBERON:0003528,1.13e-07,29;UBERON:0002791,1.13e-07,29;UBERON:0001893,1.13e-07,29;UBERON:0001016,1.77e-07,75;UBERON:0002020,1.89e-07,34;UBERON:0002021,3.50e-07,10;UBERON:0000411,3.50e-07,10;UBERON:0001950,3.50e-07,10
|phase1_expression=6.24580503708696,1.39590163055744,0,0.60492842261366,0,1.17515490338323,2.33612640595526,5.4231795845462,2.111830832275,3.5109678948299,0.34243593645101,0.319088635981346,13.1824562047028,15.1237296184865,0.999329285446988,0.607425802169478,2.09868563438444,5.0473946457318,5.75880621144103,6.36584477697045,10.4603246885816,2.18440092641948,1.56719873483361,0.639969691173627,0,0,0,0.861884930743556,0,0.252030129759931,0.443461021310609,0,0.61506478758457,0,0,0.166234645358492,0.204169356262369,3.34825304589526,0.7813353445238,3.14114246384279,2.94115744015507,2.73218193983378,1.45653105909346,0.125896817975577,0.304130793658544,0.183546752161682,0.782391344348039,3.2703773457067,1.31811709640683,2.3331587888914,2.37976916763116,0,2.51673909086605,6.5282592781021,10.4189077734164,0.257259436035947,0.286533439938757,0,3.43937983461316,3.70293685490423,0.633831403506179,0.338844532069132,0,0,0,0,0.599200221036809,2.30530983192933,3.31806759387129,1.08004750665353,1.68259969081106,0.571301968807607,1.76694832761291,3.55223317723367,4.31304619582064,1.83843757322004,3.30347642998166,6.12899222808901,7.68032666281217,3.56092976871523,5.58074625974699,5.73004707612436,3.35019598801657,3.93933827022176,9.93188610549266,7.07108605136802,6.54909731675874,4.84638559145781,0.302904773332736,0.604572480854284,2.89864488701678,0,0,0,0,0.896053774194671,3.23022166303029,0,0,0.35333957451034,5.0703631119605,1.28326477414318,0,0,0,0,0,2.39786147410026,12.9468941823586,2.82040064223167,1.38788261412909,1.21786191324856,0.691846491768175,2.26083960828934,6.58496759959947,0.502666365318702,3.21353458054686,2.60278842455841,2.65383165584962,1.94120219936891,0.883366073841574,1.93950101254089,0,13.1751358655196,10.8912287542997,3.0654846625031,5.87094110079009,2.39961092397363,4.19331749341113,7.63932260964596,11.8950156732843,9.1727677042391,15.1227158567281,12.5300574091862,10.1816141834184,9.5722345209977,4.88828946481518,2.61254638281195,1.76905930903572,3.15662783829711,5.85541993332167,3.90833577536904,4.50155324513373,6.63101198477146,9.11689088627793,5.63700369253339,4.96619140166563,5.43277078551933,3.44908788692548,4.72765200419548,2.46331573829528,2.84954452155847,5.56094498451196,4.87553033131033,4.7329891373827,4.37875387000685,7.72434506044558,3.3455227924913,1.70498099637356,5.38527008592305,3.51789089971644,3.24111710629827,4.7348947117042,5.50939848892731,3.5481435964097,2.79040733700489,4.29237442239391,3.97002164048376,3.12663714835613,2.79084688934462,2.35099547682982,1.31579988682799,1.75640092232841,2.14730270016595,43.5300193527743,22.0215870491669,1.98251269790279,0.793351699990633,4.05247676016945,4.64473343720877,2.57734922644187,1.81515172161008,1.55664630691409,1.52180500890047,1.89811624617805,2.14108641141214,2.26201687920243,4.17808591286417,2.53453313254856,1.79763881730844,1.51296634912286,0.199141273254367,1.32767530667157,2.51346727741403,2.25415471346161,3.05476991767971,2.52138233317913,2.66516115583211,1.96033265085198,1.47610147979602,1.56998727841375,1.48076596706161,0.889357881261447,1.00107063429656,1.37591296579242,0.449724224769707,0.608580364165509,0.72353147925725,0.50925170356284,1.43848068725405,2.10775794807546,0.549122826376163,1.43768206527355,1.11642284300551,1.24815069245824,0.505157755894224,0.179397413521912,0.482443521363367,10.7156850296631,1.89491411770485,3.09633455239849,2.8856664581782,5.63256595892405,7.03526281255626,5.2369600994923,4.09780660501378,7.25121662888479,6.42247599981447,4.9430978283821,7.70157579163969,6.90739927463582,6.94315481191256,0,0,0.983528546038072,1.93155722413313,4.49541651965817,3.39913891117389,1.47541450839008,2.01976741763498,0.315508219416257,1.56175497718655,1.93881057959519,0.955875191810208,1.55959071857676,1.13230612315533,4.04810701674894,1.16902343164525,2.37172666767914,16.0660658210904,8.09058485687131,1.06839362200353,5.86393053672874,13.6925202067204,0,2.18502572539483,1.51161778482376,2.82907619633847,0.295301892880773,3.3817866273832,1.55056975900933,5.81653967164009,3.56497378384721,0.948110273807448,0,0,9.19186935535228,7.74262704334634,1.68166288917581,6.43011105094777,7.27094957933322,7.31312152168489,12.3411765451591,8.22055362609418,1.40803024838226,1.69465656691056,1.10264199027481,4.45192882941996,5.48979050766079,1.62844897306021,0.954978752025092,1.80554989719567,3.78925087618806,5.7481843623258,3.07567585436135,1.03193433981611,2.40752885580625,0.565105371014073,3.41735569302563,3.43167259809784,7.64902934972349,5.59805809294632,8.01559848065658,0,1.10717597753397,2.43983360552218,2.59212817972323,1.88179466413022,2.40198820120795,3.10187996685088,4.87655388779482,2.09404753587224,1.68499465279331,1.24267862617385,37.2037339531566,1.19613236835183,0.992750942742586,1.75006069509643,1.16243841129958,3.21016638432478,5.28107573905893,2.3436789271911,2.51662426621706,2.89900944991207,13.2493802878618,7.58426689507628,0.608175645870493,1.33524244314275,2.46849563657811,2.68540043501222,3.57626438606277,4.56742708175882,3.69223817936443,5.45218829719997,4.95344243257499,5.64626636766307,6.52967800956341,4.9068039236568,6.42822961998629,2.26730383615211,0.221985953374065,0.269141569828427,0.839423081820392,4.63655025677257,3.37828455812128,4.02933573387983,2.57242054894879,1.00314420807073,31.0613513439387,22.0956113523445,21.1971339972577,15.2949332285882,7.53590771747707,9.82012066606611,10.1253375034771,9.90706647093285,7.25027854374727,9.83744592328458,3.84013186061454,6.78342284781753,3.58540572083682,5.34834777550247,2.09613162627982,3.30918315210025,5.778414922842,3.29656091582231,5.45562656306086,5.05394423527595,4.30914809813408,4.90428487603798,3.65201879132541,4.28968521112624,4.93945033018274,2.85776214769844,3.36064545240081,4.05109362973781,4.12085900803307,3.97437084362873,7.88599280486455,4.43689515398344,4.05341522910446,5.37781741539616,3.85848459702856,4.3153450024755,5.12198324043763,2.63069711437843,5.56796866768033,1.12228454331548,3.91495559809775,3.44765688314472,3.6830793885272,4.18329471202108,5.40138510747196,3.99696924700713,3.50897412668113,3.65280791882107,5.35607329792761,0.882365676478062,2.08681052058379
|short_description=p5@Rfx3
}}

Revision as of 17:18, 13 September 2013

Short description:p5@Rfx3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Rfx3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000046898, ENSMUST00000172907_5end
EntrezGene:Rfx3
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p5@Rfx3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.18
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E815.12
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.76
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.42
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.32
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.55
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.31
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.93
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H912.95
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C16.58
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I210.89
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.87
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.19
corpora quadrigemina, adult.CNhs10501.16-22A47.64
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F19.17
cortex, adult.CNhs10473.12-14D515.12
cortex, neonate N30.CNhs11107.1392-42F212.53
diencephalon, adult.CNhs10482.20-12F210.18
diencephalon, neonate N30.CNhs11201.1388-42B29.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.89
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.61
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C65.86
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C94.50
eyeball, embryo E17.CNhs11023.1261-18D46.63
eyeball, neonate N00.CNhs11207.633-15C69.12
eyeball, neonate N01.CNhs11140.1532-43E75.64
eyeball, neonate N02.CNhs11205.1551-44G84.97
eyeball, neonate N16.CNhs11188.777-19A25.43
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H24.73
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E75.56
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B54.73
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.72
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E95.39
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I93.24
heart, embryo E14.CNhs10597.403-26D44.73
heart, embryo E15.CNhs11017.431-16C85.51
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G34.29
heart, neonate N00.CNhs11213.639-21E33.97
heart, neonate N03.CNhs11221.1349-25I23.13
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G12.35
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E843.53
hippocampus, neonate N00.CNhs11228.627-43G122.02
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F82.51
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G72.67
kidney, neonate N10.CNhs11206.758-6D51.96
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B110.72
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F83.10
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A67.04
lung, embryo E18.CNhs10583.1287-20I65.24
lung, neonate N00.CNhs11224.640-42C64.10
lung, neonate N06.CNhs11212.683-20E57.25
lung, neonate N07.CNhs11111.715-19A36.42
lung, neonate N10.CNhs11219.750-23E64.94
lung, neonate N20.CNhs11109.822-18A47.70
lung, neonate N25.CNhs11119.1359-25C76.91
lung, neonate N30.CNhs11133.1394-42H26.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I916.07
ovary, adult.CNhs10507.91-2I78.09
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I45.86
oviduct, adult pregnant day01.CNhs10500.988-6G613.69
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E52.83
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G89.19
pituitary gland, embryo E12.CNhs11018.346-16E67.74
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A56.43
pituitary gland, embryo E15.CNhs10592.427-16B97.27
pituitary gland, embryo E16.CNhs11036.449-43F67.31
pituitary gland, embryo E17.CNhs11039.1265-44F512.34
pituitary gland, neonate N00.CNhs11190.1308-22E98.22
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C34.45
skin, neonate N00.CNhs11124.650-25G45.49
skin, neonate N03.CNhs11215.662-22H31.63
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C95.75
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H13.42
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.02
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D42.59
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B83.10
stomach, neonate N07.CNhs11210.718-18A94.88
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G537.20
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G53.21
testis, neonate N00.CNhs11189.1300-22B75.28
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E213.25
thymus, adult.CNhs10471.38-12B57.58
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F84.57
thymus, neonate N03.CNhs11137.2104-43C73.69
thymus, neonate N06.CNhs11197.681-26C45.45
thymus, neonate N07.CNhs11211.713-19D34.95
thymus, neonate N10.CNhs11194.748-24E45.65
thymus, neonate N20.CNhs11186.820-7A26.53
thymus, neonate N25.CNhs11125.1362-25G74.91
thymus, neonate N30.CNhs11132.1393-42G26.43
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E44.64
uterus, adult pregnant day19.CNhs10497.590-15F53.38
uterus, adult.CNhs10509.92-27E54.03
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A131.06
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.20
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I83.84
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.38
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.32
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.18
whole body, embryo E17.5.CNhs10513.490-9F95.40
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate5.16e-1449
neurectoderm6.15e-1364
neural plate6.15e-1364
presumptive neural plate6.15e-1364
brain1.01e-1247
future brain1.01e-1247
regional part of nervous system1.22e-1254
neural tube3.21e-1252
neural rod3.21e-1252
future spinal cord3.21e-1252
neural keel3.21e-1252
regional part of brain4.12e-1246
anterior neural tube7.29e-1240
ecto-epithelium1.10e-1173
regional part of forebrain2.09e-1139
forebrain2.09e-1139
future forebrain2.09e-1139
structure with developmental contribution from neural crest1.54e-0992
central nervous system1.95e-0873
ectoderm-derived structure4.35e-0895
ectoderm4.35e-0895
presumptive ectoderm4.35e-0895
brain grey matter1.13e-0729
regional part of telencephalon1.13e-0729
telencephalon1.13e-0729
nervous system1.77e-0775
gray matter1.89e-0734
occipital lobe3.50e-0710
visual cortex3.50e-0710
neocortex3.50e-0710







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