FFCP PHASE1:Mm9::chr4:149009349..149009361,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=124|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:149009349..149009361,+|id=chr4:149009349..149009361,+|ontology_enrichment_celltype=CL:0000553!1.87e-07!6;CL:0000556!1.87e-07!6|ontology_enrichment_celltype_v019_2=CL:0002027,2.22e-18,3;CL:0002006,2.22e-18,3;CL:0002024,2.22e-18,3;CL:0000553,1.85e-09,6;CL:0000556,1.85e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!1.74e-07!6;UBERON:0004457!1.74e-07!6;UBERON:0000042!1.74e-07!6;UBERON:0004854!1.74e-07!6;UBERON:0009034!1.74e-07!6;UBERON:0002095!1.74e-07!6;UBERON:0004782!1.74e-07!6;UBERON:0003281!1.74e-07!6;UBERON:0009664!1.74e-07!6;UBERON:0002296!1.74e-07!6;UBERON:0005602!1.74e-07!6;UBERON:0001179!1.74e-07!6;UBERON:0006293!1.74e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.76e-23,6;UBERON:0004457,1.76e-23,6;UBERON:0000042,1.76e-23,6;UBERON:0004854,1.76e-23,6;UBERON:0009034,1.76e-23,6;UBERON:0002095,1.76e-23,6;UBERON:0004782,1.76e-23,6;UBERON:0003281,1.76e-23,6;UBERON:0009664,1.76e-23,6;UBERON:0002296,1.76e-23,6;UBERON:0005602,1.76e-23,6;UBERON:0001179,1.76e-23,6;UBERON:0006293,1.76e-23,6;UBERON:0003887,4.42e-14,10;UBERON:0005172,5.70e-10,49;UBERON:0005173,5.70e-10,49;UBERON:0002417,5.70e-10,49;UBERON:0000916,5.70e-10,49;UBERON:0000945,9.23e-09,16;UBERON:0010039,9.23e-09,16;UBERON:0002075,2.36e-07,19;UBERON:0002390,2.68e-07,45;UBERON:0003061,2.68e-07,45;UBERON:0009569,4.61e-07,66;UBERON:0002193,8.77e-07,48;UBERON:0002405,8.77e-07,48|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,4.33042690360362,5.87178275430495,13.2916756844348,0.473193248037357,0.274228867211478,0.84877930359606,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.30559649555362,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352766121407114,0.125666591329675,0,0,1.76922110389975,0.485300549842228,1.10420759230197,0.969750506270444,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0.746441823660558,0,0.210441855886474,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,1.17935397067922,1.34917267430912,0,0.241177159752417,1.01850340712568,0.287696137450811,1.94562272130042,1.09824565275233,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0.234423373184406,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,0,1.53783792718067,0.206386867963223,1.48155621895769,2.44878994106098,4.23752105935178,2.51655990527175,0,0,0.138199973804424,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.68741272937475,0.685082519770642,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.588795680537589,0,0,0,0,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,1.22769312950907,0.154936841185966,0,0.249810577937946,0.701794825336225,0.214871054048298,0.191288332068843,0.441182838239031,0|short_description=p@chr4:149009349..149009361,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=124 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:149009349..149009361,+ | |||
|id=chr4:149009349..149009361,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.87e-07!6;CL:0000556!1.87e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,2.22e-18,3;CL:0002006,2.22e-18,3;CL:0002024,2.22e-18,3;CL:0000553,1.85e-09,6;CL:0000556,1.85e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.74e-07!6;UBERON:0004457!1.74e-07!6;UBERON:0000042!1.74e-07!6;UBERON:0004854!1.74e-07!6;UBERON:0009034!1.74e-07!6;UBERON:0002095!1.74e-07!6;UBERON:0004782!1.74e-07!6;UBERON:0003281!1.74e-07!6;UBERON:0009664!1.74e-07!6;UBERON:0002296!1.74e-07!6;UBERON:0005602!1.74e-07!6;UBERON:0001179!1.74e-07!6;UBERON:0006293!1.74e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.76e-23,6;UBERON:0004457,1.76e-23,6;UBERON:0000042,1.76e-23,6;UBERON:0004854,1.76e-23,6;UBERON:0009034,1.76e-23,6;UBERON:0002095,1.76e-23,6;UBERON:0004782,1.76e-23,6;UBERON:0003281,1.76e-23,6;UBERON:0009664,1.76e-23,6;UBERON:0002296,1.76e-23,6;UBERON:0005602,1.76e-23,6;UBERON:0001179,1.76e-23,6;UBERON:0006293,1.76e-23,6;UBERON:0003887,4.42e-14,10;UBERON:0005172,5.70e-10,49;UBERON:0005173,5.70e-10,49;UBERON:0002417,5.70e-10,49;UBERON:0000916,5.70e-10,49;UBERON:0000945,9.23e-09,16;UBERON:0010039,9.23e-09,16;UBERON:0002075,2.36e-07,19;UBERON:0002390,2.68e-07,45;UBERON:0003061,2.68e-07,45;UBERON:0009569,4.61e-07,66;UBERON:0002193,8.77e-07,48;UBERON:0002405,8.77e-07,48 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,4.33042690360362,5.87178275430495,13.2916756844348,0.473193248037357,0.274228867211478,0.84877930359606,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.30559649555362,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352766121407114,0.125666591329675,0,0,1.76922110389975,0.485300549842228,1.10420759230197,0.969750506270444,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0.746441823660558,0,0.210441855886474,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,1.17935397067922,1.34917267430912,0,0.241177159752417,1.01850340712568,0.287696137450811,1.94562272130042,1.09824565275233,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0.234423373184406,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,0,1.53783792718067,0.206386867963223,1.48155621895769,2.44878994106098,4.23752105935178,2.51655990527175,0,0,0.138199973804424,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.68741272937475,0.685082519770642,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.588795680537589,0,0,0,0,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,1.22769312950907,0.154936841185966,0,0.249810577937946,0.701794825336225,0.214871054048298,0.191288332068843,0.441182838239031,0 | |||
|short_description=p@chr4:149009349..149009361,+ | |||
}} |
Revision as of 04:28, 14 September 2013
Short description: | p@chr4:149009349..149009361, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:149009349..149009361, + |
Coexpression cluster: | MCL_coexpression_mm9:124 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 2.22e-18 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.22e-18 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.22e-18 | 3 |
megakaryocyte progenitor cell | 1.85e-09 | 6 |
megakaryocyte | 1.85e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.76e-23 | 6 |
cavity lining | 1.76e-23 | 6 |
serous membrane | 1.76e-23 | 6 |
gastrointestinal system mesentery | 1.76e-23 | 6 |
stomach region | 1.76e-23 | 6 |
mesentery | 1.76e-23 | 6 |
gastrointestinal system serosa | 1.76e-23 | 6 |
mesentery of stomach | 1.76e-23 | 6 |
gut mesentery | 1.76e-23 | 6 |
dorsal mesentery | 1.76e-23 | 6 |
dorsal mesogastrium | 1.76e-23 | 6 |
peritoneal cavity | 1.76e-23 | 6 |
spleen primordium | 1.76e-23 | 6 |
intraembryonic coelom | 4.42e-14 | 10 |
abdomen element | 5.70e-10 | 49 |
abdominal segment element | 5.70e-10 | 49 |
abdominal segment of trunk | 5.70e-10 | 49 |
abdomen | 5.70e-10 | 49 |
stomach | 9.23e-09 | 16 |
food storage organ | 9.23e-09 | 16 |
viscus | 2.36e-07 | 19 |
hematopoietic system | 2.68e-07 | 45 |
blood island | 2.68e-07 | 45 |
subdivision of trunk | 4.61e-07 | 66 |
hemolymphoid system | 8.77e-07 | 48 |
immune system | 8.77e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.