Personal tools

FFCP PHASE1:Mm9::chr11:21138518..21138539,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=245944|HGNC=|UniProt=E9PUS8,Q5SPW0,Q8BRE9,Q91ZJ4|association_with_transcript=-352bp_to_ENSMUST00000094375,NM_139061,uc007ido.2,uc007idp.2_5end|description=CAGE_peak_4_at_Vps54_5end|id=chr11:21138518..21138539,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.69e-10,31|phase1_expression=1.76163731815273,1.74487703819681,2.72999543633722,4.53696316960245,3.50627010962443,0.33575854382378,0.233612640595526,0.387369970324729,0.563154888606667,0,0,0.0797721589953364,0.684802919724823,0.174840804837995,0.333109761815663,0.809901069559304,0.699561878128147,0.788655413395594,1.09691546884591,0,0.425216450755349,0.496454756004426,0.522399578277871,1.27993938234725,0.91763712426868,2.29692785646008,0.86152399231815,0.861884930743556,1.33016393619462,0.504060259519861,0.443461021310609,0.635030673459631,0,0,0.866554859253824,0.831173226792462,1.02084678131185,1.67412652294763,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0.971020706062307,0.125896817975577,0.101376931219515,0,1.56478268869608,0.218025156380447,0,0,0.139986421625363,0,0.838913030288682,1.45072428402269,2.01656279485478,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0.207379224616955,0.405017814995072,0,0.285650984403804,0.220868540951614,0.367472397644862,1.15014565221884,0,2.20231761998777,0.255374676170375,0,0.395658863190582,0.914876436024097,0.52091337055676,0.279182999001381,1.12552522006336,0.916789486660861,0.589257170947335,0.569486723196412,0.931997229126503,0.151452386666368,0.302286240427142,0.289864488701678,1.72084775396277,0,0,0,0.448026887097336,0,0.340860645156116,0,0,0.845060518660083,1.28326477414318,2.54805239706646,0,0,0.506719730950197,0,0.34255163915718,0.258937883647172,1.1875371125186,0.520455980298408,0,0.691846491768175,1.05505848386836,1.41106448562846,1.0053327306374,0.494389935468748,0.722996784599558,0,0.323533699894818,0.441683036920787,1.45462575940567,0,0.585561594023094,1.46612694769419,1.53274233125155,0.599075622529601,0.599902730993408,0,0.299581278809645,0,0.628271760564322,0.347648640384553,0.255715457330331,1.45451631191692,0.486723789203273,0.611036183101898,1.11966273549084,2.52722758433675,1.05220927943237,0.390361328888111,0,0.540186389416048,0.150704817835715,1.15662048557257,1.40925092313335,1.12442069471675,0.258703370739016,0.862271971731369,0.378212160335639,0.351902248327898,1.09597866213787,0.834141747676794,0.348252166522167,0.61734640922383,0.398068533636986,0,0.257347907114715,0.284163499395593,0.828503090142008,0.703578179943289,0.720248245844059,1.42046841351126,0.983821158737019,0.925602677324269,0.465067889500816,0.268273401399619,0.934122738937356,0.16455984991348,1.14917224855367,0.486412857275134,0.877199924551994,0.219550115291051,0.671032093801859,1.05144974282064,0.720332286654991,5.28670052774077,2.3800550999719,0.853153002140936,0.696710015581316,1.03093969057675,2.01683524623343,1.77902435075896,1.90225626112559,1.89811624617805,1.81168850196412,4.27269854960458,2.98434708061726,3.31438948102504,3.59527763461689,2.59365659849633,1.1948476395262,0.189667900953082,1.37098215131675,0,0.814605311381257,2.32742984601151,1.40271639780637,1.01178459398812,1.03327103585722,2.66897837330337,0.740382983530803,0.296452627087149,1.16791574001266,0.786235980452812,1.12431056192427,0.811440485554012,0,0.763877555344259,0.575392274901621,1.94562272130042,1.09824565275233,1.43768206527355,2.23284568601102,1.24815069245824,0.757736633841335,0.538192240565737,1.92977408545347,1.10851914099963,0.947457058852424,0.651859905768103,0.678980343100753,0.938760993154008,0.335012514883631,0.476087281772027,1.17080188714679,1.10344600874334,1.10732344824387,1.11618338060241,0.655453258862952,1.89953480052485,1.59113964439663,0,1.63171705145613,0,0.827810238914197,0.963303539926752,0.35163505977661,0.491804836130026,1.26235463602186,0.315508219416257,0,0.215423397732799,0,0,0,0.404810701674894,0,0,1.28528526568723,1.13552068166615,0.712262414669021,1.46598263418218,1.15479086080775,0,0.242780636154981,0.906970670894253,0.377210159511796,0,1.53717573971964,1.55056975900933,1.45413491791002,1.06949213515416,0.632073515871632,0,0,1.70219802876894,0.540183282093931,0.258717367565509,0.428674070063185,1.06404140185364,0.535106452806212,1.48094118541909,0.913394847343798,0.938686832254841,0.42366414172764,0,0.49465875882444,1.93757312035087,0.844380948994182,0.596861720015682,0.656563598980245,1.45740418314925,0.927126510052548,1.19609616558497,1.44470807574256,0.925972636848558,0.753473828018764,0.410082683163076,0.915112692826091,0.509935289981566,0.279902904647316,0.138199973804424,0,0.474503990371703,0,0.86404272657441,0.418176592028937,0.87345025498471,0.404593039154462,0.330613822901344,0,0.777689839750757,0,0.56369293868419,0.897099276263873,0.496375471371293,1.94451188344048,1.29159823477731,1.35164900392623,1.64300134104056,2.3436789271911,1.04859344425711,0.724752362478018,0,0.316011120628178,0.608175645870493,0.513554785824136,0.909445760844565,0.716106782669926,1.39076948346885,0.721172697119813,1.47689527174577,0.605798699688886,0.685861259894999,0.504130925684203,0.682205165178267,0.673482891482306,0.935015217452552,0.226730383615211,0.665957860122194,0.179427713218951,0.167884616364078,0.772758376128762,0.375364950902364,1.28206136987086,1.2862102744744,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0.31136204275253,0.798049746802062,0.682934423016537,0,1.46729213839588,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,1.51618327058278,1.01391719956096,1.50901073108861,1.31098110457835,0.89635213366817,1.03383844120104,0.952587382566147,0.579421629724277,1.15745532278223,0.412085900803307,1.03039244094078,0.685738504770831,0.354951612318675,1.43061713968393,0.872078499793971,0.564656282491984,0.423073039458382,1.09756783723664,2.10455769150274,0.679020569229309,0.561142271657738,1.77952527186261,0.985044823755635,1.22769312950907,1.23949472948773,0.578719832943424,0.999242311751784,0.467863216890817,2.14871054048298,1.3390183244819,0.441182838239031,0.463735671240843|short_description=p4@Vps54}}
|EntrezGene=245944
|HGNC=
|UniProt=E9PUS8,Q5SPW0,Q8BRE9,Q91ZJ4
|association_with_transcript=-352bp_to_ENSMUST00000094375,NM_139061,uc007ido.2,uc007idp.2_5end
|description=CAGE_peak_4_at_Vps54_5end
|id=chr11:21138518..21138539,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.69e-10,31
|phase1_expression=1.76163731815273,1.74487703819681,2.72999543633722,4.53696316960245,3.50627010962443,0.33575854382378,0.233612640595526,0.387369970324729,0.563154888606667,0,0,0.0797721589953364,0.684802919724823,0.174840804837995,0.333109761815663,0.809901069559304,0.699561878128147,0.788655413395594,1.09691546884591,0,0.425216450755349,0.496454756004426,0.522399578277871,1.27993938234725,0.91763712426868,2.29692785646008,0.86152399231815,0.861884930743556,1.33016393619462,0.504060259519861,0.443461021310609,0.635030673459631,0,0,0.866554859253824,0.831173226792462,1.02084678131185,1.67412652294763,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0.971020706062307,0.125896817975577,0.101376931219515,0,1.56478268869608,0.218025156380447,0,0,0.139986421625363,0,0.838913030288682,1.45072428402269,2.01656279485478,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0.207379224616955,0.405017814995072,0,0.285650984403804,0.220868540951614,0.367472397644862,1.15014565221884,0,2.20231761998777,0.255374676170375,0,0.395658863190582,0.914876436024097,0.52091337055676,0.279182999001381,1.12552522006336,0.916789486660861,0.589257170947335,0.569486723196412,0.931997229126503,0.151452386666368,0.302286240427142,0.289864488701678,1.72084775396277,0,0,0,0.448026887097336,0,0.340860645156116,0,0,0.845060518660083,1.28326477414318,2.54805239706646,0,0,0.506719730950197,0,0.34255163915718,0.258937883647172,1.1875371125186,0.520455980298408,0,0.691846491768175,1.05505848386836,1.41106448562846,1.0053327306374,0.494389935468748,0.722996784599558,0,0.323533699894818,0.441683036920787,1.45462575940567,0,0.585561594023094,1.46612694769419,1.53274233125155,0.599075622529601,0.599902730993408,0,0.299581278809645,0,0.628271760564322,0.347648640384553,0.255715457330331,1.45451631191692,0.486723789203273,0.611036183101898,1.11966273549084,2.52722758433675,1.05220927943237,0.390361328888111,0,0.540186389416048,0.150704817835715,1.15662048557257,1.40925092313335,1.12442069471675,0.258703370739016,0.862271971731369,0.378212160335639,0.351902248327898,1.09597866213787,0.834141747676794,0.348252166522167,0.61734640922383,0.398068533636986,0,0.257347907114715,0.284163499395593,0.828503090142008,0.703578179943289,0.720248245844059,1.42046841351126,0.983821158737019,0.925602677324269,0.465067889500816,0.268273401399619,0.934122738937356,0.16455984991348,1.14917224855367,0.486412857275134,0.877199924551994,0.219550115291051,0.671032093801859,1.05144974282064,0.720332286654991,5.28670052774077,2.3800550999719,0.853153002140936,0.696710015581316,1.03093969057675,2.01683524623343,1.77902435075896,1.90225626112559,1.89811624617805,1.81168850196412,4.27269854960458,2.98434708061726,3.31438948102504,3.59527763461689,2.59365659849633,1.1948476395262,0.189667900953082,1.37098215131675,0,0.814605311381257,2.32742984601151,1.40271639780637,1.01178459398812,1.03327103585722,2.66897837330337,0.740382983530803,0.296452627087149,1.16791574001266,0.786235980452812,1.12431056192427,0.811440485554012,0,0.763877555344259,0.575392274901621,1.94562272130042,1.09824565275233,1.43768206527355,2.23284568601102,1.24815069245824,0.757736633841335,0.538192240565737,1.92977408545347,1.10851914099963,0.947457058852424,0.651859905768103,0.678980343100753,0.938760993154008,0.335012514883631,0.476087281772027,1.17080188714679,1.10344600874334,1.10732344824387,1.11618338060241,0.655453258862952,1.89953480052485,1.59113964439663,0,1.63171705145613,0,0.827810238914197,0.963303539926752,0.35163505977661,0.491804836130026,1.26235463602186,0.315508219416257,0,0.215423397732799,0,0,0,0.404810701674894,0,0,1.28528526568723,1.13552068166615,0.712262414669021,1.46598263418218,1.15479086080775,0,0.242780636154981,0.906970670894253,0.377210159511796,0,1.53717573971964,1.55056975900933,1.45413491791002,1.06949213515416,0.632073515871632,0,0,1.70219802876894,0.540183282093931,0.258717367565509,0.428674070063185,1.06404140185364,0.535106452806212,1.48094118541909,0.913394847343798,0.938686832254841,0.42366414172764,0,0.49465875882444,1.93757312035087,0.844380948994182,0.596861720015682,0.656563598980245,1.45740418314925,0.927126510052548,1.19609616558497,1.44470807574256,0.925972636848558,0.753473828018764,0.410082683163076,0.915112692826091,0.509935289981566,0.279902904647316,0.138199973804424,0,0.474503990371703,0,0.86404272657441,0.418176592028937,0.87345025498471,0.404593039154462,0.330613822901344,0,0.777689839750757,0,0.56369293868419,0.897099276263873,0.496375471371293,1.94451188344048,1.29159823477731,1.35164900392623,1.64300134104056,2.3436789271911,1.04859344425711,0.724752362478018,0,0.316011120628178,0.608175645870493,0.513554785824136,0.909445760844565,0.716106782669926,1.39076948346885,0.721172697119813,1.47689527174577,0.605798699688886,0.685861259894999,0.504130925684203,0.682205165178267,0.673482891482306,0.935015217452552,0.226730383615211,0.665957860122194,0.179427713218951,0.167884616364078,0.772758376128762,0.375364950902364,1.28206136987086,1.2862102744744,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0.31136204275253,0.798049746802062,0.682934423016537,0,1.46729213839588,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,1.51618327058278,1.01391719956096,1.50901073108861,1.31098110457835,0.89635213366817,1.03383844120104,0.952587382566147,0.579421629724277,1.15745532278223,0.412085900803307,1.03039244094078,0.685738504770831,0.354951612318675,1.43061713968393,0.872078499793971,0.564656282491984,0.423073039458382,1.09756783723664,2.10455769150274,0.679020569229309,0.561142271657738,1.77952527186261,0.985044823755635,1.22769312950907,1.23949472948773,0.578719832943424,0.999242311751784,0.467863216890817,2.14871054048298,1.3390183244819,0.441182838239031,0.463735671240843
|short_description=p4@Vps54
}}

Revision as of 19:14, 12 September 2013

Short description:p4@Vps54
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Vps54_5end
Coexpression cluster:NA
Association with transcript: -352bp_to_ENSMUST00000094375, NM_139061, uc007ido.2, uc007idp.2_5end
EntrezGene:Vps54
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Vps54

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine1.69e-1031







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:21138518..21138539,%2B&oldid=2887911"