FFCP PHASE1:Mm9::chr12:37968652..37968685,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=319660|HGNC=|MCL_coexpression_id=2781|UniProt=|association_with_transcript=286bp_to_ENSMUST00000160158_5end|description=CAGE_peak_10_at_Agmo_5end|id=chr12:37968652..37968685,+|ontology_enrichment_celltype=CL:0000107!1.05e-08!9|ontology_enrichment_celltype_v019_2=CL:0000107,7.10e-20,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!1.05e-08!9;UBERON:0000010!1.65e-07!11;UBERON:0001017!9.98e-07!73;UBERON:0005743!9.98e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0002410,7.10e-20,9;UBERON:0000010,4.92e-16,11;UBERON:0001017,9.10e-11,73;UBERON:0001016,2.26e-10,75;UBERON:0000011,5.39e-10,3;UBERON:0010313,4.27e-09,3;UBERON:0002342,4.27e-09,3;UBERON:0002005,4.27e-09,3;UBERON:0005428,4.27e-09,3;UBERON:0005062,4.27e-09,3;UBERON:0004121,2.20e-08,95;UBERON:0000924,2.20e-08,95;UBERON:0006601,2.20e-08,95;UBERON:0001896,4.94e-07,2;UBERON:0002298,4.94e-07,2;UBERON:0005290,4.94e-07,2;UBERON:0010096,4.94e-07,2|phase1_expression=0.320297694209588,1.39590163055744,0,0.60492842261366,1.50268718983904,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0.861884930743556,0.760093677825496,0.756090389279792,0.221730510655305,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.856952953211411,0.662605622854841,0,0,0,0,0.510749352340751,0.307213066512487,0,0,0,1.3959149950069,0.56276261003168,0.916789486660861,0.294628585473668,0.284743361598206,0,0.151452386666368,0,0.289864488701678,0.860423876981386,0.679971333707751,1.07940638327563,3.24888208723835,0.896053774194671,0.842666520790511,0,0,0,0.704217098883403,0,0,0,0,0,0,0.91347103775248,0.258937883647172,0.29688427812965,0.173485326766136,0,0,0,0.117588707135705,0,0,0.578397427679647,0,0,0,0,0,0.292780797011547,0.83778682725382,1.78819938646014,0,0,0,1.49790639404823,1.83000241127451,0,0.695297280769106,0.511430914660661,1.45451631191692,1.62241263067758,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,2.52347938276953,0.205809224758569,2.97376904685418,0.264450566663544,0,0,0,0,0.22237804384487,0,0.949058123089023,0.329397909448022,0.251335208800269,0.397912944082302,1.36474860983384,0,0.432276099749388,0.597423819763102,0,0,0,0,0,0,0,0,0.156998727841375,0,1.1858105083486,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.936113019343682,0,0.538192240565737,0.964887042726734,0.554259570499814,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0.327726629431476,0,0.433947175744535,0,0,0.491764273019036,0.551873492609465,1.76605648986571,1.99259867206745,0,1.26235463602186,1.26203287766503,2.73307121007647,1.07711698866399,2.15071918157297,1.78238939265915,2.26461224631066,0.809621403349789,1.16902343164525,1.97643888973262,2.24924921495265,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81374878235628,0,0,0,0,0.582961673259701,6.67531087237835,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,1.93267296660805,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.386379188064381,0,0,0,1.00314420807073,0.564751842617067,0,0,1.54667864109319,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0,0.695603506861264|short_description=p10@Agmo}} | ||
|EntrezGene=319660 | |||
|HGNC= | |||
|MCL_coexpression_id=2781 | |||
|UniProt= | |||
|association_with_transcript=286bp_to_ENSMUST00000160158_5end | |||
|description=CAGE_peak_10_at_Agmo_5end | |||
|id=chr12:37968652..37968685,+ | |||
|ontology_enrichment_celltype=CL:0000107!1.05e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,7.10e-20,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!1.05e-08!9;UBERON:0000010!1.65e-07!11;UBERON:0001017!9.98e-07!73;UBERON:0005743!9.98e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,7.10e-20,9;UBERON:0000010,4.92e-16,11;UBERON:0001017,9.10e-11,73;UBERON:0001016,2.26e-10,75;UBERON:0000011,5.39e-10,3;UBERON:0010313,4.27e-09,3;UBERON:0002342,4.27e-09,3;UBERON:0002005,4.27e-09,3;UBERON:0005428,4.27e-09,3;UBERON:0005062,4.27e-09,3;UBERON:0004121,2.20e-08,95;UBERON:0000924,2.20e-08,95;UBERON:0006601,2.20e-08,95;UBERON:0001896,4.94e-07,2;UBERON:0002298,4.94e-07,2;UBERON:0005290,4.94e-07,2;UBERON:0010096,4.94e-07,2 | |||
|phase1_expression=0.320297694209588,1.39590163055744,0,0.60492842261366,1.50268718983904,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0.861884930743556,0.760093677825496,0.756090389279792,0.221730510655305,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.856952953211411,0.662605622854841,0,0,0,0,0.510749352340751,0.307213066512487,0,0,0,1.3959149950069,0.56276261003168,0.916789486660861,0.294628585473668,0.284743361598206,0,0.151452386666368,0,0.289864488701678,0.860423876981386,0.679971333707751,1.07940638327563,3.24888208723835,0.896053774194671,0.842666520790511,0,0,0,0.704217098883403,0,0,0,0,0,0,0.91347103775248,0.258937883647172,0.29688427812965,0.173485326766136,0,0,0,0.117588707135705,0,0,0.578397427679647,0,0,0,0,0,0.292780797011547,0.83778682725382,1.78819938646014,0,0,0,1.49790639404823,1.83000241127451,0,0.695297280769106,0.511430914660661,1.45451631191692,1.62241263067758,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,2.52347938276953,0.205809224758569,2.97376904685418,0.264450566663544,0,0,0,0,0.22237804384487,0,0.949058123089023,0.329397909448022,0.251335208800269,0.397912944082302,1.36474860983384,0,0.432276099749388,0.597423819763102,0,0,0,0,0,0,0,0,0.156998727841375,0,1.1858105083486,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.936113019343682,0,0.538192240565737,0.964887042726734,0.554259570499814,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0.327726629431476,0,0.433947175744535,0,0,0.491764273019036,0.551873492609465,1.76605648986571,1.99259867206745,0,1.26235463602186,1.26203287766503,2.73307121007647,1.07711698866399,2.15071918157297,1.78238939265915,2.26461224631066,0.809621403349789,1.16902343164525,1.97643888973262,2.24924921495265,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81374878235628,0,0,0,0,0.582961673259701,6.67531087237835,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,1.93267296660805,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.386379188064381,0,0,0,1.00314420807073,0.564751842617067,0,0,1.54667864109319,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0,0.695603506861264 | |||
|short_description=p10@Agmo | |||
}} |
Revision as of 22:47, 12 September 2013
Short description: | p10@Agmo |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Agmo_5end |
Coexpression cluster: | MCL_coexpression_mm9:2781 |
Association with transcript: | 286bp_to_ENSMUST00000160158_5end |
EntrezGene: | Agmo |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 7.10e-20 | 9 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 7.10e-20 | 9 |
peripheral nervous system | 4.92e-16 | 11 |
central nervous system | 9.10e-11 | 73 |
nervous system | 2.26e-10 | 75 |
parasympathetic nervous system | 5.39e-10 | 3 |
neural crest-derived structure | 4.27e-09 | 3 |
neural crest | 4.27e-09 | 3 |
enteric nervous system | 4.27e-09 | 3 |
vagal neural crest | 4.27e-09 | 3 |
neural fold | 4.27e-09 | 3 |
ectoderm-derived structure | 2.20e-08 | 95 |
ectoderm | 2.20e-08 | 95 |
presumptive ectoderm | 2.20e-08 | 95 |
medulla oblongata | 4.94e-07 | 2 |
brainstem | 4.94e-07 | 2 |
myelencephalon | 4.94e-07 | 2 |
future myelencephalon | 4.94e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.