FFCP PHASE1:Mm9::chr3:68820596..68820608,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70099|HGNC=|MCL_coexpression_id=5|UniProt=|association_with_transcript=-9bp_to_ENSMUST00000124983_5end|description=CAGE_peak_6_at_Smc4_5end|id=chr3:68820596..68820608,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!1.22e-08!147|ontology_enrichment_uberon_v019_2=UBERON:0001048,3.88e-08,134|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,0,0,0,0,0.342401459862411,0.34968160967599,0,0.809901069559304,1.39912375625629,0.157731082679119,0.548457734422955,0,0.680346321208558,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,1.34437519656986,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0,0,0.122490799214954,0,0,0,0,0,0,0,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0.779358013808606,1.41335829804136,0,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.11418387971906,0.258937883647172,0,0.173485326766136,0.304465478312141,0.691846491768175,0.904335843315735,0.470354828542819,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0,0,0,0.479260498023681,0,0.254140454146129,0,0,0,0,0,0,0,0.407357455401265,0.124406970610093,0,0.210441855886474,0.650602214813519,0,0.180062129805349,1.50704817835715,0.340182495756639,1.0249097622788,0.0937017245597288,0,0,0.189106080167819,0,0.657587197282725,0,0.348252166522167,0,0,0,0,0,0,0.469052119962192,0.900310307305074,0.23674473558521,1.57411385397923,2.62254091908543,1.39520366850245,0,1.05088808130453,0.658239399653922,0.656669856316381,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0.102904612379284,0,0,0.213288250535234,1.16118335930219,0,0.201683524623343,0,0.190225626112559,0,0,0.502670417600539,0,0,0.898819408654221,0.432276099749388,0.199141273254367,0,0.799739588268102,0,0.814605311381257,0.581857461502877,0.49095073923223,0.0632365371242573,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0,0.899448449539415,0,0.482354319504834,0.25462585178142,0,0.810676133875177,1.92192989231657,21.5652309791032,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0,0.189491411770485,0.325929952884052,0.678980343100753,1.64283173801951,0,0,0.585400943573396,0.315270288212382,0,0.637819074629948,1.3109065177259,0.863424909329478,0.144649058581512,0,0,0,0,0,0,0.327869890753351,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,0,0,0.178065603667255,0.488660878060728,0.164970122972535,0,0.242780636154981,0.302323556964751,0.565815239267694,0,0,0,0,0.712994756769443,0,0,0,0,0.36012218806262,0,0,0,0.356737635204141,0.493647061806363,0,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0,0.164140899745061,0,0,0.170870880797853,0.619160603889667,0.185194527369712,2.26042148405629,2.32380187125743,1.60144721244566,0.339956859987711,0.279902904647316,0,0,0,0,0.432021363287205,0.418176592028937,0.218362563746178,0.404593039154462,0.247960367176008,0,0,0,1.12738587736838,0,0,0.194451188344048,0.129159823477731,1.01373675294467,0.58678619322877,0.39061315453185,0.209718688851422,4.83168241652012,2.01621004380506,0,0.405450430580328,0.308132871494482,0.77952493786677,0.537080087002444,0.596044064343795,1.68273629327956,0.886137163047463,1.00966449948148,0.990688486514998,2.52065462842101,1.46186821109629,1.92423683280659,0.818138315270983,0,0.443971906748129,0.358855426437903,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,0.399024873401031,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.192075457214608,0,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0.263069711437843,0,0,0,0.197008964751127,1.22769312950907,0,0,0.249810577937946,0,0,0,0,0|short_description=p6@Smc4}} | ||
|EntrezGene=70099 | |||
|HGNC= | |||
|MCL_coexpression_id=5 | |||
|UniProt= | |||
|association_with_transcript=-9bp_to_ENSMUST00000124983_5end | |||
|description=CAGE_peak_6_at_Smc4_5end | |||
|id=chr3:68820596..68820608,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!1.22e-08!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,3.88e-08,134 | |||
|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,0,0,0,0,0.342401459862411,0.34968160967599,0,0.809901069559304,1.39912375625629,0.157731082679119,0.548457734422955,0,0.680346321208558,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,1.34437519656986,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0,0,0.122490799214954,0,0,0,0,0,0,0,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0.779358013808606,1.41335829804136,0,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.11418387971906,0.258937883647172,0,0.173485326766136,0.304465478312141,0.691846491768175,0.904335843315735,0.470354828542819,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0,0,0,0.479260498023681,0,0.254140454146129,0,0,0,0,0,0,0,0.407357455401265,0.124406970610093,0,0.210441855886474,0.650602214813519,0,0.180062129805349,1.50704817835715,0.340182495756639,1.0249097622788,0.0937017245597288,0,0,0.189106080167819,0,0.657587197282725,0,0.348252166522167,0,0,0,0,0,0,0.469052119962192,0.900310307305074,0.23674473558521,1.57411385397923,2.62254091908543,1.39520366850245,0,1.05088808130453,0.658239399653922,0.656669856316381,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0.102904612379284,0,0,0.213288250535234,1.16118335930219,0,0.201683524623343,0,0.190225626112559,0,0,0.502670417600539,0,0,0.898819408654221,0.432276099749388,0.199141273254367,0,0.799739588268102,0,0.814605311381257,0.581857461502877,0.49095073923223,0.0632365371242573,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0,0.899448449539415,0,0.482354319504834,0.25462585178142,0,0.810676133875177,1.92192989231657,21.5652309791032,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0,0.189491411770485,0.325929952884052,0.678980343100753,1.64283173801951,0,0,0.585400943573396,0.315270288212382,0,0.637819074629948,1.3109065177259,0.863424909329478,0.144649058581512,0,0,0,0,0,0,0.327869890753351,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,0,0,0.178065603667255,0.488660878060728,0.164970122972535,0,0.242780636154981,0.302323556964751,0.565815239267694,0,0,0,0,0.712994756769443,0,0,0,0,0.36012218806262,0,0,0,0.356737635204141,0.493647061806363,0,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0,0.164140899745061,0,0,0.170870880797853,0.619160603889667,0.185194527369712,2.26042148405629,2.32380187125743,1.60144721244566,0.339956859987711,0.279902904647316,0,0,0,0,0.432021363287205,0.418176592028937,0.218362563746178,0.404593039154462,0.247960367176008,0,0,0,1.12738587736838,0,0,0.194451188344048,0.129159823477731,1.01373675294467,0.58678619322877,0.39061315453185,0.209718688851422,4.83168241652012,2.01621004380506,0,0.405450430580328,0.308132871494482,0.77952493786677,0.537080087002444,0.596044064343795,1.68273629327956,0.886137163047463,1.00966449948148,0.990688486514998,2.52065462842101,1.46186821109629,1.92423683280659,0.818138315270983,0,0.443971906748129,0.358855426437903,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,0.399024873401031,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.192075457214608,0,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0.263069711437843,0,0,0,0.197008964751127,1.22769312950907,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p6@Smc4 | |||
}} |
Revision as of 02:29, 14 September 2013
Short description: | p6@Smc4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Smc4_5end |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | -9bp_to_ENSMUST00000124983_5end |
EntrezGene: | Smc4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primordium | 3.88e-08 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.