FFCP PHASE1:Mm9::chr11:101229023..101229038,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=14377|HGNC=|MCL_coexpression_id=111|UniProt=P35576|association_with_transcript=-5bp_to_NM_008061,uc007lor.1_5end|description=CAGE_peak_1_at_G6pc_5end|id=chr11:101229023..101229038,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!3.08e-14!49;UBERON:0005173!3.08e-14!49;UBERON:0002417!3.08e-14!49;UBERON:0000916!3.08e-14!49;UBERON:0002107!1.13e-12!22;UBERON:0007499!1.13e-12!22;UBERON:0006925!1.13e-12!22;UBERON:0009497!1.13e-12!22;UBERON:0000015!1.13e-12!22;UBERON:0002423!1.13e-12!22;UBERON:0006235!1.13e-12!22;UBERON:0008835!1.13e-12!22;UBERON:0003894!1.13e-12!22;UBERON:0004161!1.13e-12!22;UBERON:0008836!1.13e-12!22;UBERON:0009854!9.06e-12!23;UBERON:0009856!9.06e-12!23;UBERON:0002365!3.38e-10!25;UBERON:0002330!3.38e-10!25;UBERON:0001007!8.03e-10!128;UBERON:0001555!8.03e-10!128;UBERON:0007026!8.03e-10!128;UBERON:0004119!2.34e-09!130;UBERON:0000925!2.34e-09!130;UBERON:0006595!2.34e-09!130;UBERON:0004921!5.15e-09!126;UBERON:0004185!5.15e-09!126;UBERON:0009569!8.78e-09!66;UBERON:0005409!1.02e-08!59;UBERON:0000160!2.22e-08!43;UBERON:0000344!9.05e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.28e-13,31;UBERON:0002107,6.72e-12,22;UBERON:0007499,6.72e-12,22;UBERON:0006925,6.72e-12,22;UBERON:0009497,6.72e-12,22;UBERON:0000015,6.72e-12,22;UBERON:0002423,6.72e-12,22;UBERON:0006235,6.72e-12,22;UBERON:0008835,6.72e-12,22;UBERON:0003894,6.72e-12,22;UBERON:0004161,6.72e-12,22;UBERON:0008836,6.72e-12,22;UBERON:0009854,4.13e-11,23;UBERON:0009856,4.13e-11,23;UBERON:0005172,6.27e-11,49;UBERON:0005173,6.27e-11,49;UBERON:0002417,6.27e-11,49;UBERON:0000916,6.27e-11,49;UBERON:0002365,9.83e-10,25;UBERON:0002330,9.83e-10,25;UBERON:0005409,2.39e-09,47;UBERON:0000344,6.52e-08,15;UBERON:0001007,3.22e-07,116;UBERON:0001555,3.22e-07,116;UBERON:0007026,3.22e-07,116;UBERON:0003104,5.57e-07,61;UBERON:0009142,5.57e-07,61;UBERON:0004119,7.13e-07,118;UBERON:0000925,7.13e-07,118;UBERON:0006595,7.13e-07,118|phase1_expression=0,82.7071716105286,97.8248364687502,365.376767258651,396.208522387561,2.68606835059024,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,121.186688465274,0,0,26.0787649153253,27.5291137280604,71.2047635502625,95.1984011511555,28.2267314818515,14.0617330397717,33.5200072580708,1.55211357458713,0,0,0,0,1.49611180822643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34796733052517,1110.80722518297,61.8773913674053,582.339743777205,646.527535360431,615.588942871739,226.958182932911,0,0,0,0,0,0,0,0,0,0,530.955040693629,0,2.22663208597237,0,0.913396434936424,0.461230994512117,2.71300752994721,42.0967571545823,3.01599819191221,0,0.578397427679647,0,0,0,0,0,0,0,12.7728527604296,0,0,0,0,0,0,0,0,0,0,0.81471491080253,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.536825675041487,0,0,202.546713969068,40.4609366995223,0,0,0,1.81515172161008,4.66993892074228,21.1150444984941,47.4529061544512,140.323509424857,121.14357064173,180.254563669283,113.07917052909,32.357498711552,60.9509300646638,120.878752865401,0,0,2.25415471346161,4.88763186828754,10.4734343070518,88.2308614220208,268.881755852342,230.419440996159,441.480422689946,574.413798055981,399.025236059302,0,0.196558995113203,0,0.202860121388503,0.241177159752417,1.2731292589071,81.993399173481,1801.32236947064,456.321068718591,336.41760327401,1208.7137980273,400.96840995221,586.488154593193,440.420650196294,1452.6374428251,0,0,0,0,0,0,0.952174563544055,0.390267295715598,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809621403349789,0,0,0,0,2.13678724400706,0.651547837414304,0,0,0,0,0,0,0.307435147943927,45.4833795976069,1.45413491791002,5.34746067577082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,74.3276133406119,0,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0,1.90934123603023,0,0,0,0.209088296014469,3.05707589244649,16.9929076444874,118.938322788758,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,7.68205870579306,0,0,0,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0.302899349844443,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,2.889207461421,2.88449080134452,1.92551525755089,2.27427490587418,3.04175159868288,2.07488975524684,2.80924522409647,3.26528277264833,3.50356360629241,3.33405583898152,1.97003354106254,3.08654752741928,1.23625770240992,3.23837624295674,2.05721551431249,2.30718548007139,1.43061713968393,2.90692833264657,2.1645157495526,2.70766745253365,2.56099162021882,1.8414879800649,2.17286582153379,1.68342681497322,2.13543032623513,1.77308068276014,2.86461730218783,3.25367366490529,1.35034627686799,0,35.3236728752567,116.030369186081,3.82576664137687,6.17655973534643,1.62307484934295|short_description=p1@G6pc}} | ||
|EntrezGene=14377 | |||
|HGNC= | |||
|MCL_coexpression_id=111 | |||
|UniProt=P35576 | |||
|association_with_transcript=-5bp_to_NM_008061,uc007lor.1_5end | |||
|description=CAGE_peak_1_at_G6pc_5end | |||
|id=chr11:101229023..101229038,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!3.08e-14!49;UBERON:0005173!3.08e-14!49;UBERON:0002417!3.08e-14!49;UBERON:0000916!3.08e-14!49;UBERON:0002107!1.13e-12!22;UBERON:0007499!1.13e-12!22;UBERON:0006925!1.13e-12!22;UBERON:0009497!1.13e-12!22;UBERON:0000015!1.13e-12!22;UBERON:0002423!1.13e-12!22;UBERON:0006235!1.13e-12!22;UBERON:0008835!1.13e-12!22;UBERON:0003894!1.13e-12!22;UBERON:0004161!1.13e-12!22;UBERON:0008836!1.13e-12!22;UBERON:0009854!9.06e-12!23;UBERON:0009856!9.06e-12!23;UBERON:0002365!3.38e-10!25;UBERON:0002330!3.38e-10!25;UBERON:0001007!8.03e-10!128;UBERON:0001555!8.03e-10!128;UBERON:0007026!8.03e-10!128;UBERON:0004119!2.34e-09!130;UBERON:0000925!2.34e-09!130;UBERON:0006595!2.34e-09!130;UBERON:0004921!5.15e-09!126;UBERON:0004185!5.15e-09!126;UBERON:0009569!8.78e-09!66;UBERON:0005409!1.02e-08!59;UBERON:0000160!2.22e-08!43;UBERON:0000344!9.05e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.28e-13,31;UBERON:0002107,6.72e-12,22;UBERON:0007499,6.72e-12,22;UBERON:0006925,6.72e-12,22;UBERON:0009497,6.72e-12,22;UBERON:0000015,6.72e-12,22;UBERON:0002423,6.72e-12,22;UBERON:0006235,6.72e-12,22;UBERON:0008835,6.72e-12,22;UBERON:0003894,6.72e-12,22;UBERON:0004161,6.72e-12,22;UBERON:0008836,6.72e-12,22;UBERON:0009854,4.13e-11,23;UBERON:0009856,4.13e-11,23;UBERON:0005172,6.27e-11,49;UBERON:0005173,6.27e-11,49;UBERON:0002417,6.27e-11,49;UBERON:0000916,6.27e-11,49;UBERON:0002365,9.83e-10,25;UBERON:0002330,9.83e-10,25;UBERON:0005409,2.39e-09,47;UBERON:0000344,6.52e-08,15;UBERON:0001007,3.22e-07,116;UBERON:0001555,3.22e-07,116;UBERON:0007026,3.22e-07,116;UBERON:0003104,5.57e-07,61;UBERON:0009142,5.57e-07,61;UBERON:0004119,7.13e-07,118;UBERON:0000925,7.13e-07,118;UBERON:0006595,7.13e-07,118 | |||
|phase1_expression=0,82.7071716105286,97.8248364687502,365.376767258651,396.208522387561,2.68606835059024,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,121.186688465274,0,0,26.0787649153253,27.5291137280604,71.2047635502625,95.1984011511555,28.2267314818515,14.0617330397717,33.5200072580708,1.55211357458713,0,0,0,0,1.49611180822643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34796733052517,1110.80722518297,61.8773913674053,582.339743777205,646.527535360431,615.588942871739,226.958182932911,0,0,0,0,0,0,0,0,0,0,530.955040693629,0,2.22663208597237,0,0.913396434936424,0.461230994512117,2.71300752994721,42.0967571545823,3.01599819191221,0,0.578397427679647,0,0,0,0,0,0,0,12.7728527604296,0,0,0,0,0,0,0,0,0,0,0.81471491080253,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.536825675041487,0,0,202.546713969068,40.4609366995223,0,0,0,1.81515172161008,4.66993892074228,21.1150444984941,47.4529061544512,140.323509424857,121.14357064173,180.254563669283,113.07917052909,32.357498711552,60.9509300646638,120.878752865401,0,0,2.25415471346161,4.88763186828754,10.4734343070518,88.2308614220208,268.881755852342,230.419440996159,441.480422689946,574.413798055981,399.025236059302,0,0.196558995113203,0,0.202860121388503,0.241177159752417,1.2731292589071,81.993399173481,1801.32236947064,456.321068718591,336.41760327401,1208.7137980273,400.96840995221,586.488154593193,440.420650196294,1452.6374428251,0,0,0,0,0,0,0.952174563544055,0.390267295715598,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809621403349789,0,0,0,0,2.13678724400706,0.651547837414304,0,0,0,0,0,0,0.307435147943927,45.4833795976069,1.45413491791002,5.34746067577082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,74.3276133406119,0,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0,1.90934123603023,0,0,0,0.209088296014469,3.05707589244649,16.9929076444874,118.938322788758,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,7.68205870579306,0,0,0,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0.302899349844443,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,2.889207461421,2.88449080134452,1.92551525755089,2.27427490587418,3.04175159868288,2.07488975524684,2.80924522409647,3.26528277264833,3.50356360629241,3.33405583898152,1.97003354106254,3.08654752741928,1.23625770240992,3.23837624295674,2.05721551431249,2.30718548007139,1.43061713968393,2.90692833264657,2.1645157495526,2.70766745253365,2.56099162021882,1.8414879800649,2.17286582153379,1.68342681497322,2.13543032623513,1.77308068276014,2.86461730218783,3.25367366490529,1.35034627686799,0,35.3236728752567,116.030369186081,3.82576664137687,6.17655973534643,1.62307484934295 | |||
|short_description=p1@G6pc | |||
}} |
Revision as of 18:15, 12 September 2013
Short description: | p1@G6pc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_G6pc_5end |
Coexpression cluster: | MCL_coexpression_mm9:111 |
Association with transcript: | -5bp_to_NM_008061, uc007lor.1_5end |
EntrezGene: | G6pc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.28e-13 | 31 |
liver | 6.72e-12 | 22 |
epithelial sac | 6.72e-12 | 22 |
digestive gland | 6.72e-12 | 22 |
epithelium of foregut-midgut junction | 6.72e-12 | 22 |
anatomical boundary | 6.72e-12 | 22 |
hepatobiliary system | 6.72e-12 | 22 |
foregut-midgut junction | 6.72e-12 | 22 |
hepatic diverticulum | 6.72e-12 | 22 |
liver primordium | 6.72e-12 | 22 |
septum transversum | 6.72e-12 | 22 |
liver bud | 6.72e-12 | 22 |
digestive tract diverticulum | 4.13e-11 | 23 |
sac | 4.13e-11 | 23 |
abdomen element | 6.27e-11 | 49 |
abdominal segment element | 6.27e-11 | 49 |
abdominal segment of trunk | 6.27e-11 | 49 |
abdomen | 6.27e-11 | 49 |
exocrine gland | 9.83e-10 | 25 |
exocrine system | 9.83e-10 | 25 |
gastrointestinal system | 2.39e-09 | 47 |
mucosa | 6.52e-08 | 15 |
digestive system | 3.22e-07 | 116 |
digestive tract | 3.22e-07 | 116 |
primitive gut | 3.22e-07 | 116 |
mesenchyme | 5.57e-07 | 61 |
entire embryonic mesenchyme | 5.57e-07 | 61 |
endoderm-derived structure | 7.13e-07 | 118 |
endoderm | 7.13e-07 | 118 |
presumptive endoderm | 7.13e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.