FFCP PHASE1:Mm9::chr12:110783406..110783429,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17263|HGNC=|MCL_coexpression_id=220|UniProt=|association_with_transcript=-178bp_to_ENSMUST00000146701,NR_003633,uc007pau.2_5end|description=CAGE_peak_9_at_Meg3_5end|id=chr12:110783406..110783429,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!7.74e-09!333;UBERON:0002346!3.51e-08!71;UBERON:0003075!3.51e-08!71;UBERON:0007284!3.51e-08!71;UBERON:0002021!6.25e-08!10;UBERON:0000411!6.25e-08!10;UBERON:0001950!6.25e-08!10;UBERON:0003056!1.41e-07!49;UBERON:0001049!2.59e-07!52;UBERON:0005068!2.59e-07!52;UBERON:0006241!2.59e-07!52;UBERON:0007135!2.59e-07!52;UBERON:0000955!4.31e-07!50;UBERON:0006238!4.31e-07!50;UBERON:0002616!8.56e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.63e-09,10;UBERON:0000411,4.63e-09,10;UBERON:0001950,4.63e-09,10;UBERON:0000955,2.32e-07,47;UBERON:0006238,2.32e-07,47;UBERON:0002616,5.08e-07,46;UBERON:0001049,5.99e-07,52;UBERON:0005068,5.99e-07,52;UBERON:0006241,5.99e-07,52;UBERON:0007135,5.99e-07,52|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,0.404632921719196,0,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.441737081903227,0.367472397644862,0.0958454710182364,0,0,1.27687338085188,0.46081959976873,0.527545150920775,0.457438218012048,0.52091337055676,0,1.12552522006336,1.22238598221448,2.06240009831567,2.42031857358475,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3750742250372,1.56136794089522,1.52232739156071,0.691846491768175,3.61734337326294,6.70255630673517,0.628332956648377,4.6967043869531,0.433798070759735,0,16.5002186946357,2.65009822152472,2.42437626567611,0,4.09893115816166,3.56059401582874,0,0,0,0,6.89036941262184,6.8625090422794,3.39266750704734,5.73620256634512,7.16003280524926,4.1557608911912,5.353961681236,6.11036183101898,0.746441823660558,0,0.841767423545896,0.390361328888111,0.459804208866946,0.900310649026746,5.27466862425003,4.08218994907967,2.17793324484245,1.21812241927647,3.3631438196072,0,2.64748512234947,1.23165786914764,2.41115305670332,12.2340789659263,6.61679116392116,8.64284972913362,3.78165106955137,0,0,0,0.621377317606506,1.64168241986767,0.900310307305074,0.946978942340841,1.57411385397923,3.39387648352232,2.55787339225449,1.3413670069981,0.583826711835847,0.658239399653922,0.985004784474571,0.486412857275134,0.438599962275997,0.439100230582101,0.134206418760372,2.73376933133365,2.88132914661996,0,0,3.19932375802851,7.43157349953403,1.54640953586512,2.62188582010345,2.00140239460383,1.52180500890047,0,0.164698954724011,1.25667604400135,1.98956472041151,0.974820435595601,2.69645822596266,0.864552199498777,0.199141273254367,0,1.82797620175566,0,2.03651327845314,0.969762435838129,0.98190147846446,0.126473074248515,0,0.156998727841375,0,0,1.33476084572875,0.982794975566015,2.24862112384854,1.21716072833102,2.41177159752417,1.52775511068852,1.72617682470486,2.2698931748505,2.47105271869273,43.1304619582064,4.09355042435354,1.5601883655728,0,0,0,0,0.37898282354097,2.11854469374634,2.37643120085263,2.81628297946203,2.1775813467436,5.47500374037832,7.41507861859636,1.26108115284953,1.55025282754142,1.11618338060241,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0,0,2.56880943980467,3.39913891117389,0.163934945376675,0.504941854408746,0,0,0.215423397732799,0,0,0,0,0,0,3.53453448063988,0,2.84904965867608,3.25773918707152,0.164970122972535,0,2.18502572539483,5.44182402536552,5.46954731292105,1.18120757152309,2.15204603560749,1.55056975900933,4.72593848320757,3.92147116223193,0.632073515871632,0,0,9.19186935535228,1.98067203434441,3.10460841078611,3.00071849044229,2.30542303734956,2.31879462882692,4.44282355625727,0.608929898229199,0.704015124191131,1.27099242518292,0.220528398054962,0.32977250588296,4.68246837418126,2.65376869683886,1.90995750405018,1.80554989719567,0.291480836629851,2.78137953015765,0,1.03193433981611,0.925972636848558,0,0,0,0,0,0,0,1.58167996790568,2.84647253977588,3.99619761040665,6.48173717644853,4.80397640241591,2.83215127408124,2.64491058321075,0.26175594198403,0.129614973291793,0,0,0.897099276263873,0.496375471371293,1.94451188344048,0.129159823477731,4.56181538825101,3.75543163666413,3.51551839078665,0.419437377702843,0.241584120826006,0,0,0.810900861160657,1.74608627180206,0.77952493786677,0.358053391334963,0.198681354781265,0,0.295379054349154,0,0.228620419965,0,0,0,0,0.453460767230423,0,0,0,0,0.375364950902364,0.549454872801795,0.428736758158132,0,14.1187960654267,8.74617949363636,13.1765968091061,14.2638141345261,4.11049511862385,8.3093328712867,6.75022500231806,9.45674526770863,7.70342095273148,11.39072685854,0.31136204275253,1.59609949360412,3.41467211508268,6.80698807791223,0.628839487883947,0.183843508450014,2.22246727801615,1.64828045791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| ||
|EntrezGene=17263 | |||
|HGNC= | |||
|MCL_coexpression_id=220 | |||
|UniProt= | |||
|association_with_transcript=-178bp_to_ENSMUST00000146701,NR_003633,uc007pau.2_5end | |||
|description=CAGE_peak_9_at_Meg3_5end | |||
|id=chr12:110783406..110783429,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!7.74e-09!333;UBERON:0002346!3.51e-08!71;UBERON:0003075!3.51e-08!71;UBERON:0007284!3.51e-08!71;UBERON:0002021!6.25e-08!10;UBERON:0000411!6.25e-08!10;UBERON:0001950!6.25e-08!10;UBERON:0003056!1.41e-07!49;UBERON:0001049!2.59e-07!52;UBERON:0005068!2.59e-07!52;UBERON:0006241!2.59e-07!52;UBERON:0007135!2.59e-07!52;UBERON:0000955!4.31e-07!50;UBERON:0006238!4.31e-07!50;UBERON:0002616!8.56e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.63e-09,10;UBERON:0000411,4.63e-09,10;UBERON:0001950,4.63e-09,10;UBERON:0000955,2.32e-07,47;UBERON:0006238,2.32e-07,47;UBERON:0002616,5.08e-07,46;UBERON:0001049,5.99e-07,52;UBERON:0005068,5.99e-07,52;UBERON:0006241,5.99e-07,52;UBERON:0007135,5.99e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,0.404632921719196,0,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.441737081903227,0.367472397644862,0.0958454710182364,0,0,1.27687338085188,0.46081959976873,0.527545150920775,0.457438218012048,0.52091337055676,0,1.12552522006336,1.22238598221448,2.06240009831567,2.42031857358475,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3750742250372,1.56136794089522,1.52232739156071,0.691846491768175,3.61734337326294,6.70255630673517,0.628332956648377,4.6967043869531,0.433798070759735,0,16.5002186946357,2.65009822152472,2.42437626567611,0,4.09893115816166,3.56059401582874,0,0,0,0,6.89036941262184,6.8625090422794,3.39266750704734,5.73620256634512,7.16003280524926,4.1557608911912,5.353961681236,6.11036183101898,0.746441823660558,0,0.841767423545896,0.390361328888111,0.459804208866946,0.900310649026746,5.27466862425003,4.08218994907967,2.17793324484245,1.21812241927647,3.3631438196072,0,2.64748512234947,1.23165786914764,2.41115305670332,12.2340789659263,6.61679116392116,8.64284972913362,3.78165106955137,0,0,0,0.621377317606506,1.64168241986767,0.900310307305074,0.946978942340841,1.57411385397923,3.39387648352232,2.55787339225449,1.3413670069981,0.583826711835847,0.658239399653922,0.985004784474571,0.486412857275134,0.438599962275997,0.439100230582101,0.134206418760372,2.73376933133365,2.88132914661996,0,0,3.19932375802851,7.43157349953403,1.54640953586512,2.62188582010345,2.00140239460383,1.52180500890047,0,0.164698954724011,1.25667604400135,1.98956472041151,0.974820435595601,2.69645822596266,0.864552199498777,0.199141273254367,0,1.82797620175566,0,2.03651327845314,0.969762435838129,0.98190147846446,0.126473074248515,0,0.156998727841375,0,0,1.33476084572875,0.982794975566015,2.24862112384854,1.21716072833102,2.41177159752417,1.52775511068852,1.72617682470486,2.2698931748505,2.47105271869273,43.1304619582064,4.09355042435354,1.5601883655728,0,0,0,0,0.37898282354097,2.11854469374634,2.37643120085263,2.81628297946203,2.1775813467436,5.47500374037832,7.41507861859636,1.26108115284953,1.55025282754142,1.11618338060241,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0,0,2.56880943980467,3.39913891117389,0.163934945376675,0.504941854408746,0,0,0.215423397732799,0,0,0,0,0,0,3.53453448063988,0,2.84904965867608,3.25773918707152,0.164970122972535,0,2.18502572539483,5.44182402536552,5.46954731292105,1.18120757152309,2.15204603560749,1.55056975900933,4.72593848320757,3.92147116223193,0.632073515871632,0,0,9.19186935535228,1.98067203434441,3.10460841078611,3.00071849044229,2.30542303734956,2.31879462882692,4.44282355625727,0.608929898229199,0.704015124191131,1.27099242518292,0.220528398054962,0.32977250588296,4.68246837418126,2.65376869683886,1.90995750405018,1.80554989719567,0.291480836629851,2.78137953015765,0,1.03193433981611,0.925972636848558,0,0,0,0,0,0,0,1.58167996790568,2.84647253977588,3.99619761040665,6.48173717644853,4.80397640241591,2.83215127408124,2.64491058321075,0.26175594198403,0.129614973291793,0,0,0.897099276263873,0.496375471371293,1.94451188344048,0.129159823477731,4.56181538825101,3.75543163666413,3.51551839078665,0.419437377702843,0.241584120826006,0,0,0.810900861160657,1.74608627180206,0.77952493786677,0.358053391334963,0.198681354781265,0,0.295379054349154,0,0.228620419965,0,0,0,0,0.453460767230423,0,0,0,0,0.375364950902364,0.549454872801795,0.428736758158132,0,14.1187960654267,8.74617949363636,13.1765968091061,14.2638141345261,4.11049511862385,8.3093328712867,6.75022500231806,9.45674526770863,7.70342095273148,11.39072685854,0.31136204275253,1.59609949360412,3.41467211508268,6.80698807791223,0.628839487883947,0.183843508450014,2.22246727801615,1.64828045791115,4.1719497246936,2.27427490587418,2.28131369901216,3.01802146217722,2.43467919421694,2.30490548657529,2.46972516509137,2.38146845641537,4.51948871184936,5.01563973205633,4.12085900803307,4.41596760403192,5.14303878578123,7.63145966485151,3.57654284920981,4.65108533223451,3.29382831453657,3.80765735512544,4.75612729469209,6.57674278594607,4.20992752922171,1.68342681497322,2.72860541685601,3.64466584789585,5.72923460437565,2.47898945897546,2.50778594275484,3.74715866906919,4.67863216890817,4.29742108096597,18.363679878609,3.52946270591225,1.85494268496337 | |||
|short_description=p9@Meg3 | |||
}} |
Revision as of 22:13, 12 September 2013
Short description: | p9@Meg3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Meg3_5end |
Coexpression cluster: | MCL_coexpression_mm9:220 |
Association with transcript: | -178bp_to_ENSMUST00000146701, NR_003633, uc007pau.2_5end |
EntrezGene: | Meg3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.63e-09 | 10 |
visual cortex | 4.63e-09 | 10 |
neocortex | 4.63e-09 | 10 |
brain | 2.32e-07 | 47 |
future brain | 2.32e-07 | 47 |
regional part of brain | 5.08e-07 | 46 |
neural tube | 5.99e-07 | 52 |
neural rod | 5.99e-07 | 52 |
future spinal cord | 5.99e-07 | 52 |
neural keel | 5.99e-07 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.