FFCP PHASE1:Mm9::chr10:75031393..75031418,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14598|HGNC=|MCL_coexpression_id=872|UniProt=D3YVX1,D3YXV6,Q60928,D3Z2C6,Q4FK56|association_with_transcript=0bp_to_ENSMUST00000125770,ENSMUST00000128886,ENSMUST00000134503,ENSMUST00000151212,uc007fqo.2_5end|description=CAGE_peak_2_at_Ggt1_5end|id=chr10:75031393..75031418,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001008!1.08e-11!17;UBERON:0006554!1.21e-11!16;UBERON:0002113!4.72e-11!14;UBERON:0003918!4.72e-11!14;UBERON:0005095!4.72e-11!14;UBERON:0007687!4.72e-11!14;UBERON:0005177!4.00e-10!85;UBERON:0001264!5.85e-10!12;UBERON:0003922!5.85e-10!12;UBERON:0002114!5.85e-10!12;UBERON:0003923!5.85e-10!12;UBERON:0003924!5.85e-10!12;UBERON:0003921!5.85e-10!12;UBERON:0002553!3.76e-09!39;UBERON:0003886!5.43e-09!38;UBERON:0005172!6.02e-09!49;UBERON:0005173!6.02e-09!49;UBERON:0002417!6.02e-09!49;UBERON:0000916!6.02e-09!49;UBERON:0001045!1.07e-08!13;UBERON:0002323!2.08e-08!37;UBERON:0004458!2.08e-08!37;UBERON:0002075!3.34e-08!19;UBERON:0005409!4.29e-08!59;UBERON:0002100!6.55e-08!98;UBERON:0002108!3.18e-07!16;UBERON:0000489!5.39e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002113,7.75e-15,14;UBERON:0003918,7.75e-15,14;UBERON:0011143,7.75e-15,14;UBERON:0005095,7.75e-15,14;UBERON:0007687,7.75e-15,14;UBERON:0006554,1.78e-13,18;UBERON:0001264,2.62e-13,12;UBERON:0001008,1.88e-12,19;UBERON:0005177,4.89e-10,79;UBERON:0002075,4.40e-09,19;UBERON:0000489,3.44e-08,21;UBERON:0002100,4.40e-08,90;UBERON:0005172,6.05e-08,49;UBERON:0005173,6.05e-08,49;UBERON:0002417,6.05e-08,49;UBERON:0000916,6.05e-08,49;UBERON:0003886,2.59e-07,38;UBERON:0002553,5.84e-07,39|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,31.5510606460469,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0,0,0.151452386666368,0.0755715601067855,0.579728977403356,0,0,0,0,0,13.6231087527799,0,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0.505524445014783,26.1481084556647,0,0,0.346970653532272,2.13125834818499,4.38169444786511,0.753613202763113,0.587943535678524,0,9.88779870937496,0,0,0,0,0,0,0,0,12.7728527604296,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,9.16554274652847,20.2783362094452,78.0913323560055,0,0.390361328888111,0,0.180062129805349,1.35634336052144,0.476255494059295,0.12811372028485,0.374806898238915,0,0,0,0,0,0.278047249225598,0,0,4.17971960318836,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,15.8601015832223,0.264450566663544,0.426576501070468,0.232236671860439,1.80414445850931,5.24377164020691,3.55804870151792,6.65789691393957,6.16887780007865,2.30578536613615,2.5133520880027,2.18852119245266,2.72949721966768,8.98819408654222,0,4.97853183135918,8.72472344384176,17.5942709418982,33.8123207019241,47.6544107158035,58.1857461502877,58.2127305089644,78.160359885582,130.782591109928,113.03908404579,122.533383774348,0.296452627087149,1.00107063429656,1.37591296579242,1.12431056192427,3.04290182082754,10.1294407096015,17.3145579211365,14.3848068725405,7.45822043165163,12.6298250066517,0,0.744281895337007,0.312037673114561,0.505157755894224,0,0.482443521363367,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0.585400943573396,0,0,0,0,0,0,0,0,51.6352486669988,12.1412168374082,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.283880170416537,2.49291845134157,0.81443479676788,0.329940245945071,240.268700395333,3.8844901784797,16.3254720760966,103.732793865744,144.107323725817,102.068469117384,41.3485269069154,45.0781824552107,49.909632973861,219.01347324952,353.152338726246,251.650725525576,0,0,0,0,0,0,0,0.304464949114599,1.40803024838226,0.847328283455281,33.0792597082443,0,0,0,0,0,6.12109756922687,0,0,4.12773735926445,2.03713980106683,0.188368457004691,0.410082683163076,0,0,0,0,8.59203556213602,0.316335993581135,2.03319467126849,3.24016022465404,2.29997125615916,4.80397640241591,2.29269388854195,0.495920734352016,0.26175594198403,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.516639293910924,0.168956125490778,0.704143431874524,1.69265700297135,0,0,0.288030006257865,0,0.608175645870493,0.718976700153791,0.25984164595559,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,1.33191572024439,0.179427713218951,0.503653849092235,0.579568782096571,1.50145980360946,0.36630324853453,0.857473516316263,170.032943267988,0,0,0,0,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0.972426868273176,0.419226325255965,1.2869045591501,2.66696073361938,2.47242068686673,1.92551525755089,1.01078884705519,4.81610669791456,2.07488975524684,3.183811253976,2.56100609619477,3.15895079255873,3.33405583898152,3.47652977834566,3.08654752741928,4.53294490883637,1.32479028120958,2.40008476669791,2.48466128623072,2.86123427936785,2.47088908274958,3.29382831453657,2.62305284464197,2.92684756596436,3.15683653725411,3.53090695999241,2.24456908663095,2.01679530811096,2.06859412988683,2.45538625901814,3.25367366490529,4.62975866354739,0.249810577937946,3.97683734357194,1.28922632428979,0,0,0.231867835620421|short_description=p2@Ggt1}} | ||
|EntrezGene=14598 | |||
|HGNC= | |||
|MCL_coexpression_id=872 | |||
|UniProt=D3YVX1,D3YXV6,Q60928,D3Z2C6,Q4FK56 | |||
|association_with_transcript=0bp_to_ENSMUST00000125770,ENSMUST00000128886,ENSMUST00000134503,ENSMUST00000151212,uc007fqo.2_5end | |||
|description=CAGE_peak_2_at_Ggt1_5end | |||
|id=chr10:75031393..75031418,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001008!1.08e-11!17;UBERON:0006554!1.21e-11!16;UBERON:0002113!4.72e-11!14;UBERON:0003918!4.72e-11!14;UBERON:0005095!4.72e-11!14;UBERON:0007687!4.72e-11!14;UBERON:0005177!4.00e-10!85;UBERON:0001264!5.85e-10!12;UBERON:0003922!5.85e-10!12;UBERON:0002114!5.85e-10!12;UBERON:0003923!5.85e-10!12;UBERON:0003924!5.85e-10!12;UBERON:0003921!5.85e-10!12;UBERON:0002553!3.76e-09!39;UBERON:0003886!5.43e-09!38;UBERON:0005172!6.02e-09!49;UBERON:0005173!6.02e-09!49;UBERON:0002417!6.02e-09!49;UBERON:0000916!6.02e-09!49;UBERON:0001045!1.07e-08!13;UBERON:0002323!2.08e-08!37;UBERON:0004458!2.08e-08!37;UBERON:0002075!3.34e-08!19;UBERON:0005409!4.29e-08!59;UBERON:0002100!6.55e-08!98;UBERON:0002108!3.18e-07!16;UBERON:0000489!5.39e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,7.75e-15,14;UBERON:0003918,7.75e-15,14;UBERON:0011143,7.75e-15,14;UBERON:0005095,7.75e-15,14;UBERON:0007687,7.75e-15,14;UBERON:0006554,1.78e-13,18;UBERON:0001264,2.62e-13,12;UBERON:0001008,1.88e-12,19;UBERON:0005177,4.89e-10,79;UBERON:0002075,4.40e-09,19;UBERON:0000489,3.44e-08,21;UBERON:0002100,4.40e-08,90;UBERON:0005172,6.05e-08,49;UBERON:0005173,6.05e-08,49;UBERON:0002417,6.05e-08,49;UBERON:0000916,6.05e-08,49;UBERON:0003886,2.59e-07,38;UBERON:0002553,5.84e-07,39 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,31.5510606460469,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0,0,0.151452386666368,0.0755715601067855,0.579728977403356,0,0,0,0,0,13.6231087527799,0,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0.505524445014783,26.1481084556647,0,0,0.346970653532272,2.13125834818499,4.38169444786511,0.753613202763113,0.587943535678524,0,9.88779870937496,0,0,0,0,0,0,0,0,12.7728527604296,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,9.16554274652847,20.2783362094452,78.0913323560055,0,0.390361328888111,0,0.180062129805349,1.35634336052144,0.476255494059295,0.12811372028485,0.374806898238915,0,0,0,0,0,0.278047249225598,0,0,4.17971960318836,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,15.8601015832223,0.264450566663544,0.426576501070468,0.232236671860439,1.80414445850931,5.24377164020691,3.55804870151792,6.65789691393957,6.16887780007865,2.30578536613615,2.5133520880027,2.18852119245266,2.72949721966768,8.98819408654222,0,4.97853183135918,8.72472344384176,17.5942709418982,33.8123207019241,47.6544107158035,58.1857461502877,58.2127305089644,78.160359885582,130.782591109928,113.03908404579,122.533383774348,0.296452627087149,1.00107063429656,1.37591296579242,1.12431056192427,3.04290182082754,10.1294407096015,17.3145579211365,14.3848068725405,7.45822043165163,12.6298250066517,0,0.744281895337007,0.312037673114561,0.505157755894224,0,0.482443521363367,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0.585400943573396,0,0,0,0,0,0,0,0,51.6352486669988,12.1412168374082,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.283880170416537,2.49291845134157,0.81443479676788,0.329940245945071,240.268700395333,3.8844901784797,16.3254720760966,103.732793865744,144.107323725817,102.068469117384,41.3485269069154,45.0781824552107,49.909632973861,219.01347324952,353.152338726246,251.650725525576,0,0,0,0,0,0,0,0.304464949114599,1.40803024838226,0.847328283455281,33.0792597082443,0,0,0,0,0,6.12109756922687,0,0,4.12773735926445,2.03713980106683,0.188368457004691,0.410082683163076,0,0,0,0,8.59203556213602,0.316335993581135,2.03319467126849,3.24016022465404,2.29997125615916,4.80397640241591,2.29269388854195,0.495920734352016,0.26175594198403,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.516639293910924,0.168956125490778,0.704143431874524,1.69265700297135,0,0,0.288030006257865,0,0.608175645870493,0.718976700153791,0.25984164595559,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,1.33191572024439,0.179427713218951,0.503653849092235,0.579568782096571,1.50145980360946,0.36630324853453,0.857473516316263,170.032943267988,0,0,0,0,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0.972426868273176,0.419226325255965,1.2869045591501,2.66696073361938,2.47242068686673,1.92551525755089,1.01078884705519,4.81610669791456,2.07488975524684,3.183811253976,2.56100609619477,3.15895079255873,3.33405583898152,3.47652977834566,3.08654752741928,4.53294490883637,1.32479028120958,2.40008476669791,2.48466128623072,2.86123427936785,2.47088908274958,3.29382831453657,2.62305284464197,2.92684756596436,3.15683653725411,3.53090695999241,2.24456908663095,2.01679530811096,2.06859412988683,2.45538625901814,3.25367366490529,4.62975866354739,0.249810577937946,3.97683734357194,1.28922632428979,0,0,0.231867835620421 | |||
|short_description=p2@Ggt1 | |||
}} |
Revision as of 17:21, 12 September 2013
Short description: | p2@Ggt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ggt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:872 |
Association with transcript: | 0bp_to_ENSMUST00000125770, ENSMUST00000128886, ENSMUST00000134503, ENSMUST00000151212, uc007fqo.2_5end |
EntrezGene: | Ggt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 7.75e-15 | 14 |
kidney mesenchyme | 7.75e-15 | 14 |
upper urinary tract | 7.75e-15 | 14 |
kidney rudiment | 7.75e-15 | 14 |
kidney field | 7.75e-15 | 14 |
urinary system structure | 1.78e-13 | 18 |
pancreas | 2.62e-13 | 12 |
renal system | 1.88e-12 | 19 |
trunk region element | 4.89e-10 | 79 |
viscus | 4.40e-09 | 19 |
cavitated compound organ | 3.44e-08 | 21 |
trunk | 4.40e-08 | 90 |
abdomen element | 6.05e-08 | 49 |
abdominal segment element | 6.05e-08 | 49 |
abdominal segment of trunk | 6.05e-08 | 49 |
abdomen | 6.05e-08 | 49 |
body cavity precursor | 2.59e-07 | 38 |
anatomical cavity | 5.84e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.