FFCP PHASE1:Mm9::chr6:54766884..54766897,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=387524|HGNC=|UniProt=Q71FD5|association_with_transcript=-12bp_to_ENSMUST00000079869,NM_199143,uc009cae.2_5end|description=CAGE_peak_8_at_Znrf2_5end|id=chr6:54766884..54766897,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002320,7.08e-07,46;CL:0000134,7.08e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!1.97e-10!128;UBERON:0001555!1.97e-10!128;UBERON:0007026!1.97e-10!128;UBERON:0004921!2.01e-10!126;UBERON:0004185!2.01e-10!126;UBERON:0004119!8.64e-10!130;UBERON:0000925!8.64e-10!130;UBERON:0006595!8.64e-10!130;UBERON:0003929!1.26e-07!55;UBERON:0002405!3.24e-07!70;UBERON:0000160!5.65e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.07e-12,31;UBERON:0004921,1.01e-11,114;UBERON:0001007,2.90e-11,116;UBERON:0001555,2.90e-11,116;UBERON:0007026,2.90e-11,116;UBERON:0004119,8.04e-11,118;UBERON:0000925,8.04e-11,118;UBERON:0006595,8.04e-11,118;UBERON:0003929,4.94e-09,55;UBERON:0005409,4.17e-08,47;UBERON:0001242,9.47e-08,13;UBERON:0001262,9.47e-08,13;UBERON:0004786,9.47e-08,13;UBERON:0002384,7.08e-07,46|phase1_expression=0.320297694209588,2.44282785347553,2.72999543633722,4.83942738090928,4.50806156951712,1.34303417529512,0.467225281191051,2.7115897922731,1.267098499365,1.17032263160997,0.34243593645101,0.478632953972018,3.42401459862411,3.58423649917889,0.333109761815663,0.809901069559304,1.39912375625629,1.89277299214943,1.91960207048034,0.84877930359606,0.765389611359628,1.09220046320974,0.783599367416806,0.319984845586813,0.68822784320151,3.44539178469012,1.7230479846363,2.15471232685889,3.80046838912748,4.03248207615889,1.10865255327652,0,0,0,0.577703239502549,1.32987716286794,0.204169356262369,0.837063261473815,0.7813353445238,0,0.588231488031014,0.683045484958446,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0,0,1.67782606057736,5.80289713609076,3.36093799142464,0.257259436035947,0.573066879877513,0,0.404632921719196,0,0,0,0,2.2497492932035,1.97773272513395,0.7104801149461,0.299600110518405,0.384218305321555,0.622137673850866,0.405017814995072,0.630974884054146,0.285650984403804,0.220868540951614,0.61245399607477,0.191690942036473,0,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,1.04182674111352,0,0,0.15279824777681,0.883885756421003,0.427115042397309,0.186399445825301,0.302904773332736,0.0755715601067855,0.289864488701678,1.72084775396277,4.0798280022465,2.15881276655127,1.94932925234301,1.34408066129201,1.12355536105401,0.170430322578058,0,0,0.14084341977668,0,0,0,0.432982082022428,0.760079596425296,1.51657333504435,0.91347103775248,1.03575153458869,1.1875371125186,0.520455980298408,0.304465478312141,0.691846491768175,0.301445281105245,0.587943535678524,0.376999773989026,1.48316980640624,1.44599356919912,0,0.323533699894818,0.220841518460394,0.969750506270444,0,0.292780797011547,0.209446706813455,1.02182822083437,1.55759661857696,0,1.14363204365758,0.149790639404823,0,0.251308704225729,0,0,0,0.162241263067758,0.611036183101898,0.373220911830279,0.252722758433675,1.68353484709179,0.520481771850815,0.229902104433473,0,0.150704817835715,0.204109497453984,0.12811372028485,0.281105173679186,0.517406741478031,0.215567992932842,0,0,0,0,0.696504333044333,0.411564272815887,0.199034266818493,0.702213187313235,0.772043721344145,2.27330799516474,0.828503090142008,0,0,0,0.590292695242212,0.308534225774757,0.232533944750408,0.804820204198858,0.700592054203017,0.493679549740441,0.492502392237286,0.56748166682099,1.02339991197733,0.439100230582101,0.671032093801859,0.210289948564127,0.720332286654991,3.30418782983798,0.528901133327089,0.213288250535234,0,0.515469845288373,1.4117846723634,1.11189021922435,1.52180500890047,2.37264530772256,1.81168850196412,2.26201687920243,1.39269530428806,0.974820435595601,1.79763881730844,1.08069024937347,2.38969527905241,0,0.228497025219458,0,0.203651327845314,0.775809948670503,0.841629838683823,0.505892296994058,1.32849133181642,2.19798218977925,2.59134044235781,1.1858105083486,0.166845105716094,0,0.449724224769707,0.405720242777006,0.482354319504834,1.2731292589071,0.287696137450811,1.13494658742525,1.09824565275233,0,1.11642284300551,1.24815069245824,1.26289438973556,1.4351793081753,2.8946611281802,0.369506380333209,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0.167506257441816,0,1.17080188714679,0.315270288212382,0,0.478364305972461,0.655453258862952,0.345369963731791,0.723245292907558,1.50791283939272,0,1.96705709207614,2.75936746304733,0.321101179975584,0.117211686592203,0.491804836130026,0.252470927204373,0.315508219416257,0.390438744296638,0,0.477937595905104,0.668396022247182,0,0.404810701674894,0.292255857911312,1.58115111178609,0.321321316421807,1.13552068166615,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.754420319023592,0,0.922305443831782,2.32585463851399,0.727067458955011,0,1.26414703174326,1.05418608574999,1.03135543248187,0.34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| ||
|EntrezGene=387524 | |||
|HGNC= | |||
|UniProt=Q71FD5 | |||
|association_with_transcript=-12bp_to_ENSMUST00000079869,NM_199143,uc009cae.2_5end | |||
|description=CAGE_peak_8_at_Znrf2_5end | |||
|id=chr6:54766884..54766897,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,7.08e-07,46;CL:0000134,7.08e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.97e-10!128;UBERON:0001555!1.97e-10!128;UBERON:0007026!1.97e-10!128;UBERON:0004921!2.01e-10!126;UBERON:0004185!2.01e-10!126;UBERON:0004119!8.64e-10!130;UBERON:0000925!8.64e-10!130;UBERON:0006595!8.64e-10!130;UBERON:0003929!1.26e-07!55;UBERON:0002405!3.24e-07!70;UBERON:0000160!5.65e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.07e-12,31;UBERON:0004921,1.01e-11,114;UBERON:0001007,2.90e-11,116;UBERON:0001555,2.90e-11,116;UBERON:0007026,2.90e-11,116;UBERON:0004119,8.04e-11,118;UBERON:0000925,8.04e-11,118;UBERON:0006595,8.04e-11,118;UBERON:0003929,4.94e-09,55;UBERON:0005409,4.17e-08,47;UBERON:0001242,9.47e-08,13;UBERON:0001262,9.47e-08,13;UBERON:0004786,9.47e-08,13;UBERON:0002384,7.08e-07,46 | |||
|phase1_expression=0.320297694209588,2.44282785347553,2.72999543633722,4.83942738090928,4.50806156951712,1.34303417529512,0.467225281191051,2.7115897922731,1.267098499365,1.17032263160997,0.34243593645101,0.478632953972018,3.42401459862411,3.58423649917889,0.333109761815663,0.809901069559304,1.39912375625629,1.89277299214943,1.91960207048034,0.84877930359606,0.765389611359628,1.09220046320974,0.783599367416806,0.319984845586813,0.68822784320151,3.44539178469012,1.7230479846363,2.15471232685889,3.80046838912748,4.03248207615889,1.10865255327652,0,0,0,0.577703239502549,1.32987716286794,0.204169356262369,0.837063261473815,0.7813353445238,0,0.588231488031014,0.683045484958446,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0,0,1.67782606057736,5.80289713609076,3.36093799142464,0.257259436035947,0.573066879877513,0,0.404632921719196,0,0,0,0,2.2497492932035,1.97773272513395,0.7104801149461,0.299600110518405,0.384218305321555,0.622137673850866,0.405017814995072,0.630974884054146,0.285650984403804,0.220868540951614,0.61245399607477,0.191690942036473,0,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,1.04182674111352,0,0,0.15279824777681,0.883885756421003,0.427115042397309,0.186399445825301,0.302904773332736,0.0755715601067855,0.289864488701678,1.72084775396277,4.0798280022465,2.15881276655127,1.94932925234301,1.34408066129201,1.12355536105401,0.170430322578058,0,0,0.14084341977668,0,0,0,0.432982082022428,0.760079596425296,1.51657333504435,0.91347103775248,1.03575153458869,1.1875371125186,0.520455980298408,0.304465478312141,0.691846491768175,0.301445281105245,0.587943535678524,0.376999773989026,1.48316980640624,1.44599356919912,0,0.323533699894818,0.220841518460394,0.969750506270444,0,0.292780797011547,0.209446706813455,1.02182822083437,1.55759661857696,0,1.14363204365758,0.149790639404823,0,0.251308704225729,0,0,0,0.162241263067758,0.611036183101898,0.373220911830279,0.252722758433675,1.68353484709179,0.520481771850815,0.229902104433473,0,0.150704817835715,0.204109497453984,0.12811372028485,0.281105173679186,0.517406741478031,0.215567992932842,0,0,0,0,0.696504333044333,0.411564272815887,0.199034266818493,0.702213187313235,0.772043721344145,2.27330799516474,0.828503090142008,0,0,0,0.590292695242212,0.308534225774757,0.232533944750408,0.804820204198858,0.700592054203017,0.493679549740441,0.492502392237286,0.56748166682099,1.02339991197733,0.439100230582101,0.671032093801859,0.210289948564127,0.720332286654991,3.30418782983798,0.528901133327089,0.213288250535234,0,0.515469845288373,1.4117846723634,1.11189021922435,1.52180500890047,2.37264530772256,1.81168850196412,2.26201687920243,1.39269530428806,0.974820435595601,1.79763881730844,1.08069024937347,2.38969527905241,0,0.228497025219458,0,0.203651327845314,0.775809948670503,0.841629838683823,0.505892296994058,1.32849133181642,2.19798218977925,2.59134044235781,1.1858105083486,0.166845105716094,0,0.449724224769707,0.405720242777006,0.482354319504834,1.2731292589071,0.287696137450811,1.13494658742525,1.09824565275233,0,1.11642284300551,1.24815069245824,1.26289438973556,1.4351793081753,2.8946611281802,0.369506380333209,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0.167506257441816,0,1.17080188714679,0.315270288212382,0,0.478364305972461,0.655453258862952,0.345369963731791,0.723245292907558,1.50791283939272,0,1.96705709207614,2.75936746304733,0.321101179975584,0.117211686592203,0.491804836130026,0.252470927204373,0.315508219416257,0.390438744296638,0,0.477937595905104,0.668396022247182,0,0.404810701674894,0.292255857911312,1.58115111178609,0.321321316421807,1.13552068166615,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.754420319023592,0,0.922305443831782,2.32585463851399,0.727067458955011,0,1.26414703174326,1.05418608574999,1.03135543248187,0.340439605753788,0,0.258717367565509,0.214337035031592,0.354680467284547,0,0,0,0.23467170806371,0,0.661585194164886,0.8244312647074,0.484393280087717,0.542816324353403,0.477489376012546,0.492422699235184,2.04036585640896,0.18542530201051,0.683483523191411,0.206386867963223,0.370389054739423,0.376736914009382,0.410082683163076,0.228778173206523,0.339956859987711,0.69975726161829,0.967399816630967,2.86401185404534,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0.539457385539283,0.991841468704031,1.30877970992015,1.55537967950151,0.621339313086926,0.56369293868419,0.149516546043979,0.165458490457098,0.777804753376191,0.258319646955462,0.168956125490778,0.938857909166032,0.39061315453185,0.314578033277133,0,0.288030006257865,1.26404448251271,0.405450430580328,0.308132871494482,0.649604114888975,0.716106782669926,0.993406773906324,1.08175904567972,0.738447635872886,0.807731599585181,1.600342939755,0.806609481094724,1.26695244961678,1.53938946624527,2.10378423926824,1.13365191807606,0,0.269141569828427,0.167884616364078,0.965947970160952,0.750729901804728,0.549454872801795,1.286210274474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| |||
|short_description=p8@Znrf2 | |||
}} | |||
Revision as of 10:21, 14 September 2013
| Short description: | p8@Znrf2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_8_at_Znrf2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -12bp_to_ENSMUST00000079869, NM_199143, uc009cae.2_5end |
| EntrezGene: | Znrf2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| connective tissue cell | 7.08e-07 | 46 |
| mesenchymal cell | 7.08e-07 | 46 |
| Ontology term | p-value | n |
|---|---|---|
| intestine | 7.07e-12 | 31 |
| subdivision of digestive tract | 1.01e-11 | 114 |
| digestive system | 2.90e-11 | 116 |
| digestive tract | 2.90e-11 | 116 |
| primitive gut | 2.90e-11 | 116 |
| endoderm-derived structure | 8.04e-11 | 118 |
| endoderm | 8.04e-11 | 118 |
| presumptive endoderm | 8.04e-11 | 118 |
| gut epithelium | 4.94e-09 | 55 |
| gastrointestinal system | 4.17e-08 | 47 |
| intestinal mucosa | 9.47e-08 | 13 |
| wall of intestine | 9.47e-08 | 13 |
| gastrointestinal system mucosa | 9.47e-08 | 13 |
| connective tissue | 7.08e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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