FFCP PHASE1:Mm9::chr1:92865960..92865979,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19329|HGNC=|UniProt=|association_with_transcript=145bp_to_ENSMUST00000128226_5end|description=CAGE_peak_2_at_Rab17_5end|id=chr1:92865960..92865979,-|ontology_enrichment_celltype=CL:0002563!3.05e-08!9;CL:0002251!3.05e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,2.24e-14,9;CL:0002251,2.24e-14,9;CL:0000239,1.77e-10,6;CL:0000677,1.77e-10,6;CL:0000584,1.77e-10,6;CL:0000066,3.47e-10,25;CL:0000075,7.64e-09,7;CL:0000223,7.81e-08,20;CL:0002076,7.98e-08,15;CL:0000107,4.59e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.26e-13!43;UBERON:0000344!9.40e-13!15;UBERON:0001242!2.56e-11!13;UBERON:0000060!2.56e-11!13;UBERON:0001262!2.56e-11!13;UBERON:0004786!2.56e-11!13;UBERON:0005409!8.74e-10!59;UBERON:0004923!2.06e-08!24;UBERON:0003350!3.05e-08!9;UBERON:0004808!3.05e-08!9;UBERON:0001277!3.05e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.49e-36,31;UBERON:0000344,4.90e-23,15;UBERON:0005409,9.75e-23,47;UBERON:0001242,2.81e-20,13;UBERON:0001262,2.81e-20,13;UBERON:0004786,2.81e-20,13;UBERON:0004923,4.82e-15,24;UBERON:0003350,2.24e-14,9;UBERON:0004808,2.24e-14,9;UBERON:0001277,2.24e-14,9;UBERON:0000485,2.17e-11,11;UBERON:0001007,3.26e-10,116;UBERON:0001555,3.26e-10,116;UBERON:0007026,3.26e-10,116;UBERON:0004119,6.97e-10,118;UBERON:0000925,6.97e-10,118;UBERON:0006595,6.97e-10,118;UBERON:0004921,7.12e-09,114;UBERON:0002108,9.23e-08,4;UBERON:0002410,4.59e-07,9|phase1_expression=0,3.14077866875425,8.18998630901165,13.0059610861937,13.5241847085514,1.00727563147134,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.198581902401771,0.261199789138935,2.87986361028132,2.75291137280604,9.18771142584032,6.03066794622705,3.44753972297422,17.29213117053,7.05684363327806,2.66076612786366,0,0,0,4.33277429626912,2.32728503501889,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,1.3599426674155,0,0,1.34408066129201,0.561777680527007,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,1.48439043634778,0,0,0,0,0,0,0.117588707135705,0,13.1013332899218,0,0,0,0,0,0,0,0,2.81002760729451,0.359445373517761,0,0,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,0,0,1.98251269790279,0.528901133327089,0,0.464473343720877,2.31961430379768,5.64713868945359,10.229390016864,7.98947629672748,4.74529061544512,11.5289268306808,7.03738584640755,10.9426059622633,7.01870713628832,3.59527763461689,2.80979464837102,3.98282546508734,0.189667900953082,0.342745537829186,0,1.22190796707189,1.55161989734101,0.561086559122548,2.33975187359752,1.77132177575523,2.04098346193787,3.20832626196681,0.889357881261447,0,0.786235980452812,0,0.811440485554012,0.241177159752417,0.25462585178142,1.15078454980324,0.324270453550071,0.274561413188081,2.87536413054709,0,0.936113019343682,0,0.538192240565737,1.92977408545347,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2085575359138,1.95219372148319,1.29254038639679,0.716906393857656,0,1.41538265394416,2.42886421004937,2.33804686329049,1.18586333383957,0,0,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,2.06742634534577,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0.509935289981566,0.839708713941948,0,0,0,0,0.648032044930808,0.209088296014469,0.436725127492355,0,0.165306911450672,0,1.16653475962614,4.97071450469541,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.93841237725591,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.419226325255965,0.551530525350042,1.77797382241292,0.206035057238894,0,0,1.52087579934144,0.377252682772152,0.468207537349412,0.448176066834085,0.516919220600519,0.476293691283074,0.347652977834566,0.578727661391115,0.824171801606613,0.441596760403192,0.342869252385415,0.70990322463735,0.476872379894642,0.581385666529314,0.752875043322645,0.507687647350059,0.914639864363863,0.526139422875686,0.679020569229309,0.561142271657738,0.593175090620871,0.197008964751127,0.409231043169689,0.309873682371932,0.771626443924566,0,0.467863216890817,0.429742108096597,0,0,0|short_description=p2@Rab17}} | ||
|EntrezGene=19329 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=145bp_to_ENSMUST00000128226_5end | |||
|description=CAGE_peak_2_at_Rab17_5end | |||
|id=chr1:92865960..92865979,- | |||
|ontology_enrichment_celltype=CL:0002563!3.05e-08!9;CL:0002251!3.05e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.24e-14,9;CL:0002251,2.24e-14,9;CL:0000239,1.77e-10,6;CL:0000677,1.77e-10,6;CL:0000584,1.77e-10,6;CL:0000066,3.47e-10,25;CL:0000075,7.64e-09,7;CL:0000223,7.81e-08,20;CL:0002076,7.98e-08,15;CL:0000107,4.59e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.26e-13!43;UBERON:0000344!9.40e-13!15;UBERON:0001242!2.56e-11!13;UBERON:0000060!2.56e-11!13;UBERON:0001262!2.56e-11!13;UBERON:0004786!2.56e-11!13;UBERON:0005409!8.74e-10!59;UBERON:0004923!2.06e-08!24;UBERON:0003350!3.05e-08!9;UBERON:0004808!3.05e-08!9;UBERON:0001277!3.05e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.49e-36,31;UBERON:0000344,4.90e-23,15;UBERON:0005409,9.75e-23,47;UBERON:0001242,2.81e-20,13;UBERON:0001262,2.81e-20,13;UBERON:0004786,2.81e-20,13;UBERON:0004923,4.82e-15,24;UBERON:0003350,2.24e-14,9;UBERON:0004808,2.24e-14,9;UBERON:0001277,2.24e-14,9;UBERON:0000485,2.17e-11,11;UBERON:0001007,3.26e-10,116;UBERON:0001555,3.26e-10,116;UBERON:0007026,3.26e-10,116;UBERON:0004119,6.97e-10,118;UBERON:0000925,6.97e-10,118;UBERON:0006595,6.97e-10,118;UBERON:0004921,7.12e-09,114;UBERON:0002108,9.23e-08,4;UBERON:0002410,4.59e-07,9 | |||
|phase1_expression=0,3.14077866875425,8.18998630901165,13.0059610861937,13.5241847085514,1.00727563147134,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.198581902401771,0.261199789138935,2.87986361028132,2.75291137280604,9.18771142584032,6.03066794622705,3.44753972297422,17.29213117053,7.05684363327806,2.66076612786366,0,0,0,4.33277429626912,2.32728503501889,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,1.3599426674155,0,0,1.34408066129201,0.561777680527007,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,1.48439043634778,0,0,0,0,0,0,0.117588707135705,0,13.1013332899218,0,0,0,0,0,0,0,0,2.81002760729451,0.359445373517761,0,0,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,0,0,1.98251269790279,0.528901133327089,0,0.464473343720877,2.31961430379768,5.64713868945359,10.229390016864,7.98947629672748,4.74529061544512,11.5289268306808,7.03738584640755,10.9426059622633,7.01870713628832,3.59527763461689,2.80979464837102,3.98282546508734,0.189667900953082,0.342745537829186,0,1.22190796707189,1.55161989734101,0.561086559122548,2.33975187359752,1.77132177575523,2.04098346193787,3.20832626196681,0.889357881261447,0,0.786235980452812,0,0.811440485554012,0.241177159752417,0.25462585178142,1.15078454980324,0.324270453550071,0.274561413188081,2.87536413054709,0,0.936113019343682,0,0.538192240565737,1.92977408545347,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2085575359138,1.95219372148319,1.29254038639679,0.716906393857656,0,1.41538265394416,2.42886421004937,2.33804686329049,1.18586333383957,0,0,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,2.06742634534577,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0.509935289981566,0.839708713941948,0,0,0,0,0.648032044930808,0.209088296014469,0.436725127492355,0,0.165306911450672,0,1.16653475962614,4.97071450469541,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.93841237725591,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.419226325255965,0.551530525350042,1.77797382241292,0.206035057238894,0,0,1.52087579934144,0.377252682772152,0.468207537349412,0.448176066834085,0.516919220600519,0.476293691283074,0.347652977834566,0.578727661391115,0.824171801606613,0.441596760403192,0.342869252385415,0.70990322463735,0.476872379894642,0.581385666529314,0.752875043322645,0.507687647350059,0.914639864363863,0.526139422875686,0.679020569229309,0.561142271657738,0.593175090620871,0.197008964751127,0.409231043169689,0.309873682371932,0.771626443924566,0,0.467863216890817,0.429742108096597,0,0,0 | |||
|short_description=p2@Rab17 | |||
}} |
Revision as of 21:15, 13 September 2013
Short description: | p2@Rab17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rab17_5end |
Coexpression cluster: | NA |
Association with transcript: | 145bp_to_ENSMUST00000128226_5end |
EntrezGene: | Rab17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.24e-14 | 9 |
epithelial cell of alimentary canal | 2.24e-14 | 9 |
brush border epithelial cell | 1.77e-10 | 6 |
gut absorptive cell | 1.77e-10 | 6 |
enterocyte | 1.77e-10 | 6 |
epithelial cell | 3.47e-10 | 25 |
columnar/cuboidal epithelial cell | 7.64e-09 | 7 |
endodermal cell | 7.81e-08 | 20 |
endo-epithelial cell | 7.98e-08 | 15 |
autonomic neuron | 4.59e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.49e-36 | 31 |
mucosa | 4.90e-23 | 15 |
gastrointestinal system | 9.75e-23 | 47 |
intestinal mucosa | 2.81e-20 | 13 |
wall of intestine | 2.81e-20 | 13 |
gastrointestinal system mucosa | 2.81e-20 | 13 |
organ component layer | 4.82e-15 | 24 |
epithelium of mucosa | 2.24e-14 | 9 |
gastrointestinal system epithelium | 2.24e-14 | 9 |
intestinal epithelium | 2.24e-14 | 9 |
simple columnar epithelium | 2.17e-11 | 11 |
digestive system | 3.26e-10 | 116 |
digestive tract | 3.26e-10 | 116 |
primitive gut | 3.26e-10 | 116 |
endoderm-derived structure | 6.97e-10 | 118 |
endoderm | 6.97e-10 | 118 |
presumptive endoderm | 6.97e-10 | 118 |
subdivision of digestive tract | 7.12e-09 | 114 |
small intestine | 9.23e-08 | 4 |
autonomic nervous system | 4.59e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.