FFCP PHASE1:Mm9::chr19:9093071..9093074,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=52|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:9093071..9093074,+|id=chr19:9093071..9093074,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,4.51e-19,3;CL:0000068,1.78e-18,3;CL:0002202,1.78e-18,3;CL:0000069,1.78e-18,3;CL:0002632,1.78e-18,3;CL:0002368,1.78e-18,3;CL:0000307,1.78e-18,3;CL:0000377,1.78e-18,3;CL:0002076,3.24e-14,15;CL:0000217,9.57e-13,2;CL:0000328,9.57e-13,2;CL:0002573,9.57e-13,2;CL:0002376,9.57e-13,2;CL:0000218,9.57e-13,2;CL:0000692,9.57e-13,2;CL:0002377,9.57e-13,2;CL:0002375,9.57e-13,2;CL:0002476,1.44e-12,2;CL:0000066,3.18e-11,25;CL:0000223,1.42e-10,20;CL:0000215,8.49e-09,3;CL:0000473,4.82e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.78e-18,3;UBERON:0001005,1.78e-18,3;UBERON:0007196,1.78e-18,3;UBERON:0001558,1.78e-18,3;UBERON:0000072,9.87e-08,27|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.17008658030214,0.198581902401771,0,0,0,1.14846392823004,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0.550640256485045,0,0,0,0.194429899074283,0,0,0,0,0.336093799142464,0,0.286533439938757,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,2.04460721999597,1.13357340160178,0.289864488701678,0,0,0,0,0,0,0,1.81850203222008,2.12003744706204,0.14084341977668,1.28326477414318,5.09610479413291,7.11066703153331,2.38140145112336,3.80039798212648,1.01104889002957,0,0,0,0,0,0,0,0.23517741427141,0.502666365318702,0.247194967734374,0,0,0.647067399789637,0.883366073841574,0,0,0,0.41889341362691,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0.509196819251581,0.124406970610093,0,0,0,0,0,0,0.204109497453984,0,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0,0.350296027101508,0.16455984991348,0.32833492815819,0.405344047729279,0.584799949701329,0,0.268412837520744,0,0,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335012514883631,0,0.975668239288994,0,0.44292937929755,0.318909537314974,0.81931657357869,0.345369963731791,0.433947175744535,1.50791283939272,1.08781136763742,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0.977321756121456,0,0,0,0,0,0,0,0,0,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.32977250588296,0,0.422190474497091,0.954978752025092,0.164140899745061,0.582961673259701,0,0,0.206386867963223,0,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0,0.269728692769641,0.0826534557253359,0.523511883968059,0,0,0,0,0,0,0.258319646955462,0,0.469428954583016,0.2604087696879,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0.269141569828427,0.671538465456314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.38581844092741,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr19:9093071..9093074,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:9093071..9093074,+ | |||
|id=chr19:9093071..9093074,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,4.51e-19,3;CL:0000068,1.78e-18,3;CL:0002202,1.78e-18,3;CL:0000069,1.78e-18,3;CL:0002632,1.78e-18,3;CL:0002368,1.78e-18,3;CL:0000307,1.78e-18,3;CL:0000377,1.78e-18,3;CL:0002076,3.24e-14,15;CL:0000217,9.57e-13,2;CL:0000328,9.57e-13,2;CL:0002573,9.57e-13,2;CL:0002376,9.57e-13,2;CL:0000218,9.57e-13,2;CL:0000692,9.57e-13,2;CL:0002377,9.57e-13,2;CL:0002375,9.57e-13,2;CL:0002476,1.44e-12,2;CL:0000066,3.18e-11,25;CL:0000223,1.42e-10,20;CL:0000215,8.49e-09,3;CL:0000473,4.82e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.78e-18,3;UBERON:0001005,1.78e-18,3;UBERON:0007196,1.78e-18,3;UBERON:0001558,1.78e-18,3;UBERON:0000072,9.87e-08,27 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.17008658030214,0.198581902401771,0,0,0,1.14846392823004,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0.550640256485045,0,0,0,0.194429899074283,0,0,0,0,0.336093799142464,0,0.286533439938757,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,2.04460721999597,1.13357340160178,0.289864488701678,0,0,0,0,0,0,0,1.81850203222008,2.12003744706204,0.14084341977668,1.28326477414318,5.09610479413291,7.11066703153331,2.38140145112336,3.80039798212648,1.01104889002957,0,0,0,0,0,0,0,0.23517741427141,0.502666365318702,0.247194967734374,0,0,0.647067399789637,0.883366073841574,0,0,0,0.41889341362691,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0.509196819251581,0.124406970610093,0,0,0,0,0,0,0.204109497453984,0,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0,0.350296027101508,0.16455984991348,0.32833492815819,0.405344047729279,0.584799949701329,0,0.268412837520744,0,0,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335012514883631,0,0.975668239288994,0,0.44292937929755,0.318909537314974,0.81931657357869,0.345369963731791,0.433947175744535,1.50791283939272,1.08781136763742,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0.977321756121456,0,0,0,0,0,0,0,0,0,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.32977250588296,0,0.422190474497091,0.954978752025092,0.164140899745061,0.582961673259701,0,0,0.206386867963223,0,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0,0.269728692769641,0.0826534557253359,0.523511883968059,0,0,0,0,0,0,0.258319646955462,0,0.469428954583016,0.2604087696879,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0.269141569828427,0.671538465456314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.38581844092741,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr19:9093071..9093074,+ | |||
}} |
Revision as of 18:30, 13 September 2013
Short description: | p@chr19:9093071..9093074, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:9093071..9093074, + |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 4.51e-19 | 3 |
duct epithelial cell | 1.78e-18 | 3 |
epithelial cell of tracheobronchial tree | 1.78e-18 | 3 |
branched duct epithelial cell | 1.78e-18 | 3 |
epithelial cell of lower respiratory tract | 1.78e-18 | 3 |
respiratory epithelial cell | 1.78e-18 | 3 |
tracheal epithelial cell | 1.78e-18 | 3 |
tracheoblast | 1.78e-18 | 3 |
endo-epithelial cell | 3.24e-14 | 15 |
insulating cell | 9.57e-13 | 2 |
myelin accumulating cell | 9.57e-13 | 2 |
Schwann cell | 9.57e-13 | 2 |
non-myelinating Schwann cell | 9.57e-13 | 2 |
myelinating Schwann cell;;Schwann cell | 9.57e-13 | 2 |
terminal Schwann cell | 9.57e-13 | 2 |
immature Schwann cell | 9.57e-13 | 2 |
Schwann cell precursor | 9.57e-13 | 2 |
bone marrow macrophage | 1.44e-12 | 2 |
epithelial cell | 3.18e-11 | 25 |
endodermal cell | 1.42e-10 | 20 |
barrier cell | 8.49e-09 | 3 |
defensive cell | 4.82e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.78e-18 | 3 |
respiratory airway | 1.78e-18 | 3 |
tracheobronchial tree | 1.78e-18 | 3 |
lower respiratory tract | 1.78e-18 | 3 |
segment of respiratory tract | 9.87e-08 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.