FFCP PHASE1:Mm9::chr17:44309492..44309496,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=217|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:44309492..44309496,+|id=chr17:44309492..44309496,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,5.96e-10,6;CL:0000677,5.96e-10,6;CL:0000584,5.96e-10,6;CL:0000075,1.73e-08,7;CL:0000682,1.51e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.63e-19!43;UBERON:0005409!2.10e-18!59;UBERON:0000344!4.13e-10!15;UBERON:0001242!1.72e-08!13;UBERON:0000060!1.72e-08!13;UBERON:0001262!1.72e-08!13;UBERON:0004786!1.72e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.29e-48,31;UBERON:0005409,3.09e-35,47;UBERON:0000344,7.75e-12,15;UBERON:0001007,8.25e-12,116;UBERON:0001555,8.25e-12,116;UBERON:0007026,8.25e-12,116;UBERON:0004119,1.67e-11,118;UBERON:0000925,1.67e-11,118;UBERON:0006595,1.67e-11,118;UBERON:0004921,5.49e-11,114;UBERON:0001242,6.57e-11,13;UBERON:0001262,6.57e-11,13;UBERON:0004786,6.57e-11,13;UBERON:0004923,8.24e-07,24|phase1_expression=0,1.39590163055744,1.36499771816861,2.11724947914781,2.00358291978539,0.33575854382378,1.40167584357315,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0.639969691173627,2.52350209173887,1.14846392823004,1.29228598847722,1.50829862880122,1.71021077510736,1.00812051903972,0.443461021310609,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,14.0501380364725,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.1205711578173,7.66906643324278,0.426576501070468,1.16118335930219,1.9330119198314,5.24377164020691,6.89371935919098,4.94586627892654,16.1339880925134,7.41145296258049,9.55073793441024,7.56034593756373,6.62877896205008,17.0775687644302,20.3169766882213,13.9398891278057,0,0,0,0.407302655690628,0.775809948670503,0.350679099451593,0.632365371242573,1.03327103585722,2.511979645462,0.987177311374404,0,0,0,0,0,0.241177159752417,0.50925170356284,0,0.162135226775035,0.823684239564244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,10.4933101186746,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.648032044930808,0.418176592028937,1.09181281873089,0.134864346384821,0.247960367176008,0,2.85152941241944,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.561849044819294,0.256100609619477,0.287177344778066,0.476293691283074,0.811190281613988,0.578727661391115,0.412085900803307,0.735994600671987,0.685738504770831,0.70990322463735,0.238436189947321,0.872078499793971,0.376437521661322,0.676916863133412,0.73171189149109,1.05227884575137,0.679020569229309,0.561142271657738,0.355905054372522,0.0985044823755635,0,1.08455788830176,0.964533054905707,0,0.233931608445408,0.644613162144895,0.191288332068843,0.220591419119515,0|short_description=p@chr17:44309492..44309496,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=217 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:44309492..44309496,+ | |||
|id=chr17:44309492..44309496,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.96e-10,6;CL:0000677,5.96e-10,6;CL:0000584,5.96e-10,6;CL:0000075,1.73e-08,7;CL:0000682,1.51e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.63e-19!43;UBERON:0005409!2.10e-18!59;UBERON:0000344!4.13e-10!15;UBERON:0001242!1.72e-08!13;UBERON:0000060!1.72e-08!13;UBERON:0001262!1.72e-08!13;UBERON:0004786!1.72e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.29e-48,31;UBERON:0005409,3.09e-35,47;UBERON:0000344,7.75e-12,15;UBERON:0001007,8.25e-12,116;UBERON:0001555,8.25e-12,116;UBERON:0007026,8.25e-12,116;UBERON:0004119,1.67e-11,118;UBERON:0000925,1.67e-11,118;UBERON:0006595,1.67e-11,118;UBERON:0004921,5.49e-11,114;UBERON:0001242,6.57e-11,13;UBERON:0001262,6.57e-11,13;UBERON:0004786,6.57e-11,13;UBERON:0004923,8.24e-07,24 | |||
|phase1_expression=0,1.39590163055744,1.36499771816861,2.11724947914781,2.00358291978539,0.33575854382378,1.40167584357315,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0.639969691173627,2.52350209173887,1.14846392823004,1.29228598847722,1.50829862880122,1.71021077510736,1.00812051903972,0.443461021310609,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,14.0501380364725,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.1205711578173,7.66906643324278,0.426576501070468,1.16118335930219,1.9330119198314,5.24377164020691,6.89371935919098,4.94586627892654,16.1339880925134,7.41145296258049,9.55073793441024,7.56034593756373,6.62877896205008,17.0775687644302,20.3169766882213,13.9398891278057,0,0,0,0.407302655690628,0.775809948670503,0.350679099451593,0.632365371242573,1.03327103585722,2.511979645462,0.987177311374404,0,0,0,0,0,0.241177159752417,0.50925170356284,0,0.162135226775035,0.823684239564244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,10.4933101186746,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.648032044930808,0.418176592028937,1.09181281873089,0.134864346384821,0.247960367176008,0,2.85152941241944,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.561849044819294,0.256100609619477,0.287177344778066,0.476293691283074,0.811190281613988,0.578727661391115,0.412085900803307,0.735994600671987,0.685738504770831,0.70990322463735,0.238436189947321,0.872078499793971,0.376437521661322,0.676916863133412,0.73171189149109,1.05227884575137,0.679020569229309,0.561142271657738,0.355905054372522,0.0985044823755635,0,1.08455788830176,0.964533054905707,0,0.233931608445408,0.644613162144895,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr17:44309492..44309496,+ | |||
}} |
Revision as of 14:35, 13 September 2013
Short description: | p@chr17:44309492..44309496, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:44309492..44309496, + |
Coexpression cluster: | MCL_coexpression_mm9:217 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.96e-10 | 6 |
gut absorptive cell | 5.96e-10 | 6 |
enterocyte | 5.96e-10 | 6 |
columnar/cuboidal epithelial cell | 1.73e-08 | 7 |
M cell of gut | 1.51e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.29e-48 | 31 |
gastrointestinal system | 3.09e-35 | 47 |
mucosa | 7.75e-12 | 15 |
digestive system | 8.25e-12 | 116 |
digestive tract | 8.25e-12 | 116 |
primitive gut | 8.25e-12 | 116 |
endoderm-derived structure | 1.67e-11 | 118 |
endoderm | 1.67e-11 | 118 |
presumptive endoderm | 1.67e-11 | 118 |
subdivision of digestive tract | 5.49e-11 | 114 |
intestinal mucosa | 6.57e-11 | 13 |
wall of intestine | 6.57e-11 | 13 |
gastrointestinal system mucosa | 6.57e-11 | 13 |
organ component layer | 8.24e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.