FFCP PHASE1:Mm9::chr19:7369884..7369958,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13728|HGNC=|MCL_coexpression_id=895|UniProt=Q3T9A3,Q05512|association_with_transcript=0bp_to_ENSMUST00000025921,NM_001080390,uc008gkq.1_5end|description=CAGE_peak_2_at_Mark2_5end|id=chr19:7369884..7369958,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.05e-22!130;UBERON:0000925!1.05e-22!130;UBERON:0006595!1.05e-22!130;UBERON:0001007!9.35e-22!128;UBERON:0001555!9.35e-22!128;UBERON:0007026!9.35e-22!128;UBERON:0004921!1.34e-20!126;UBERON:0004185!1.34e-20!126;UBERON:0005409!3.31e-11!59;UBERON:0000077!2.13e-10!97;UBERON:0004923!8.27e-10!24;UBERON:0001041!3.57e-09!92;UBERON:0005911!9.05e-09!69;UBERON:0001004!2.29e-08!42;UBERON:0003104!3.58e-08!131;UBERON:0009142!3.58e-08!131;UBERON:0004177!5.30e-08!29;UBERON:0000065!5.31e-08!41;UBERON:0002193!8.56e-08!48;UBERON:0003929!1.19e-07!55;UBERON:0000160!1.27e-07!43;UBERON:0000072!2.27e-07!27;UBERON:0002405!4.80e-07!70;UBERON:0000344!6.32e-07!15;UBERON:0003408!8.65e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.08e-26,118;UBERON:0000925,8.08e-26,118;UBERON:0006595,8.08e-26,118;UBERON:0001007,9.01e-25,116;UBERON:0001555,9.01e-25,116;UBERON:0007026,9.01e-25,116;UBERON:0004921,1.74e-23,114;UBERON:0005409,3.07e-15,47;UBERON:0000160,2.04e-11,31;UBERON:0001041,6.00e-11,80;UBERON:0004923,1.52e-10,24;UBERON:0000077,2.97e-10,35;UBERON:0001004,1.60e-09,42;UBERON:0004177,3.29e-09,29;UBERON:0005057,3.29e-09,29;UBERON:0000065,4.08e-09,41;UBERON:0002193,4.85e-09,48;UBERON:0002405,4.85e-09,48;UBERON:0005911,8.85e-09,69;UBERON:0000072,1.63e-08,27;UBERON:0003408,6.94e-08,24;UBERON:0006562,1.23e-07,24;UBERON:0001557,1.23e-07,24;UBERON:0001042,1.23e-07,24;UBERON:0008814,1.23e-07,24;UBERON:0009145,1.23e-07,24;UBERON:0002390,1.31e-07,45;UBERON:0003061,1.31e-07,45;UBERON:0003929,1.48e-07,55;UBERON:0002370,1.81e-07,23;UBERON:0000974,1.81e-07,23;UBERON:0004807,1.81e-07,23;UBERON:0005058,1.81e-07,23;UBERON:0003351,1.81e-07,23;UBERON:0009113,1.81e-07,23;UBERON:0003295,1.81e-07,23;UBERON:0009722,1.81e-07,23;UBERON:0005562,1.81e-07,23;UBERON:0007690,1.81e-07,23;UBERON:0000344,2.09e-07,15|phase1_expression=0,16.40184415905,20.4749657725291,12.40103266358,14.0250804384977,11.7515490338323,9.34450562382103,45.1931632045517,7.74337971834167,7.49006484230379,2.39705155515707,1.83475965689274,49.4770109501185,59.1836124376612,7.32841475994458,8.09901069559304,3.49780939064073,23.9751245672261,23.0352248457641,19.0975343309114,4.67738095830884,11.1205865344992,5.22399578277871,21.5989770771099,19.4997888907094,16.0784949952206,17.230479846363,17.2376986148711,11.7814520062952,11.3413558391969,11.5299865540758,8.25539875497521,7.38077745101484,0,7.22129049378186,5.48574329683025,6.73758875665818,63.61680787201,28.9094077473806,50.7818031654584,44.1173616023261,49.8623204019665,40.2973593015858,0.125896817975577,0.101376931219515,1.28482726513177,0,0,0,0,2.93971485413261,0,10.4025215755797,35.5427449585559,45.7087566833751,0,0.573066879877513,2.06268836910977,0.202316460859598,0,0,0.338844532069132,0.889294796111139,0,0.988866362566974,0,0,0.384218305321555,0,0,0,0,0,0,0,0.919218786610021,0,0,0,0,0,0.52091337055676,0,0.56276261003168,0.15279824777681,0,0,0,0.605809546665472,0.0755715601067855,1.15945795480671,0,0.679971333707751,0,0.649776417447669,0.896053774194671,4.49422144421606,0.511290967734173,0.259786004602869,1.41335829804136,0,0,0,0,8.22665955842614,7.34743609877786,10.1104889002957,6.96521666286266,26.4116641320115,1.63286352971307,0.346970653532272,0.608930956624282,0.230615497256059,0.150722640552623,0.823120949949934,0.628332956648377,39.3039998697654,1.44599356919912,7.96149496754887,1.45590164952668,4.85851340612866,2.42437626567611,27.9587641827183,0,0,22.2247638031475,0.958520996047362,0,0.254140454146129,0.149790639404823,0,0,0,0.255715457330331,0,0.162241263067758,0.611036183101898,4.47865094196335,2.0217820674694,3.78795340595653,0.390361328888111,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.187403449119458,1.55222022443409,0,0,0.351902248327898,0.43839146485515,1.11218899690239,1.39300866608867,0.61734640922383,0.199034266818493,1.40442637462647,1.54408744268829,3.12579849335152,0,0.469052119962192,0,0.23674473558521,0,0.462801338662135,0.232533944750408,0.536546802799238,0.116765342367169,0,0.164167464079095,0.56748166682099,0.292399974850665,0.439100230582101,0.268412837520744,0,0,20.4859645449955,19.5693419331023,0.213288250535234,0.464473343720877,4.76809606891745,7.86565746031036,8.00560957841533,11.7939888189787,10.9141684155238,11.5289268306808,10.8074139784116,15.7175612912509,11.1129529657898,23.3693046250098,18.1555961894743,13.7407478545513,0.379335801906163,0.685491075658373,2.25415471346161,0,0.969762435838129,0.911765658574141,2.21327879934901,3.69025369949005,4.23896565171712,3.94870924549762,0.592905254174298,2.16898637430922,2.94838492669805,5.39669069723649,6.28866376304359,4.3411888755435,4.8378911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| ||
|EntrezGene=13728 | |||
|HGNC= | |||
|MCL_coexpression_id=895 | |||
|UniProt=Q3T9A3,Q05512 | |||
|association_with_transcript=0bp_to_ENSMUST00000025921,NM_001080390,uc008gkq.1_5end | |||
|description=CAGE_peak_2_at_Mark2_5end | |||
|id=chr19:7369884..7369958,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.05e-22!130;UBERON:0000925!1.05e-22!130;UBERON:0006595!1.05e-22!130;UBERON:0001007!9.35e-22!128;UBERON:0001555!9.35e-22!128;UBERON:0007026!9.35e-22!128;UBERON:0004921!1.34e-20!126;UBERON:0004185!1.34e-20!126;UBERON:0005409!3.31e-11!59;UBERON:0000077!2.13e-10!97;UBERON:0004923!8.27e-10!24;UBERON:0001041!3.57e-09!92;UBERON:0005911!9.05e-09!69;UBERON:0001004!2.29e-08!42;UBERON:0003104!3.58e-08!131;UBERON:0009142!3.58e-08!131;UBERON:0004177!5.30e-08!29;UBERON:0000065!5.31e-08!41;UBERON:0002193!8.56e-08!48;UBERON:0003929!1.19e-07!55;UBERON:0000160!1.27e-07!43;UBERON:0000072!2.27e-07!27;UBERON:0002405!4.80e-07!70;UBERON:0000344!6.32e-07!15;UBERON:0003408!8.65e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.08e-26,118;UBERON:0000925,8.08e-26,118;UBERON:0006595,8.08e-26,118;UBERON:0001007,9.01e-25,116;UBERON:0001555,9.01e-25,116;UBERON:0007026,9.01e-25,116;UBERON:0004921,1.74e-23,114;UBERON:0005409,3.07e-15,47;UBERON:0000160,2.04e-11,31;UBERON:0001041,6.00e-11,80;UBERON:0004923,1.52e-10,24;UBERON:0000077,2.97e-10,35;UBERON:0001004,1.60e-09,42;UBERON:0004177,3.29e-09,29;UBERON:0005057,3.29e-09,29;UBERON:0000065,4.08e-09,41;UBERON:0002193,4.85e-09,48;UBERON:0002405,4.85e-09,48;UBERON:0005911,8.85e-09,69;UBERON:0000072,1.63e-08,27;UBERON:0003408,6.94e-08,24;UBERON:0006562,1.23e-07,24;UBERON:0001557,1.23e-07,24;UBERON:0001042,1.23e-07,24;UBERON:0008814,1.23e-07,24;UBERON:0009145,1.23e-07,24;UBERON:0002390,1.31e-07,45;UBERON:0003061,1.31e-07,45;UBERON:0003929,1.48e-07,55;UBERON:0002370,1.81e-07,23;UBERON:0000974,1.81e-07,23;UBERON:0004807,1.81e-07,23;UBERON:0005058,1.81e-07,23;UBERON:0003351,1.81e-07,23;UBERON:0009113,1.81e-07,23;UBERON:0003295,1.81e-07,23;UBERON:0009722,1.81e-07,23;UBERON:0005562,1.81e-07,23;UBERON:0007690,1.81e-07,23;UBERON:0000344,2.09e-07,15 | |||
|phase1_expression=0,16.40184415905,20.4749657725291,12.40103266358,14.0250804384977,11.7515490338323,9.34450562382103,45.1931632045517,7.74337971834167,7.49006484230379,2.39705155515707,1.83475965689274,49.4770109501185,59.1836124376612,7.32841475994458,8.09901069559304,3.49780939064073,23.9751245672261,23.0352248457641,19.0975343309114,4.67738095830884,11.1205865344992,5.22399578277871,21.5989770771099,19.4997888907094,16.0784949952206,17.230479846363,17.2376986148711,11.7814520062952,11.3413558391969,11.5299865540758,8.25539875497521,7.38077745101484,0,7.22129049378186,5.48574329683025,6.73758875665818,63.61680787201,28.9094077473806,50.7818031654584,44.1173616023261,49.8623204019665,40.2973593015858,0.125896817975577,0.101376931219515,1.28482726513177,0,0,0,0,2.93971485413261,0,10.4025215755797,35.5427449585559,45.7087566833751,0,0.573066879877513,2.06268836910977,0.202316460859598,0,0,0.338844532069132,0.889294796111139,0,0.988866362566974,0,0,0.384218305321555,0,0,0,0,0,0,0,0.919218786610021,0,0,0,0,0,0.52091337055676,0,0.56276261003168,0.15279824777681,0,0,0,0.605809546665472,0.0755715601067855,1.15945795480671,0,0.679971333707751,0,0.649776417447669,0.896053774194671,4.49422144421606,0.511290967734173,0.259786004602869,1.41335829804136,0,0,0,0,8.22665955842614,7.34743609877786,10.1104889002957,6.96521666286266,26.4116641320115,1.63286352971307,0.346970653532272,0.608930956624282,0.230615497256059,0.150722640552623,0.823120949949934,0.628332956648377,39.3039998697654,1.44599356919912,7.96149496754887,1.45590164952668,4.85851340612866,2.42437626567611,27.9587641827183,0,0,22.2247638031475,0.958520996047362,0,0.254140454146129,0.149790639404823,0,0,0,0.255715457330331,0,0.162241263067758,0.611036183101898,4.47865094196335,2.0217820674694,3.78795340595653,0.390361328888111,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.187403449119458,1.55222022443409,0,0,0.351902248327898,0.43839146485515,1.11218899690239,1.39300866608867,0.61734640922383,0.199034266818493,1.40442637462647,1.54408744268829,3.12579849335152,0,0.469052119962192,0,0.23674473558521,0,0.462801338662135,0.232533944750408,0.536546802799238,0.116765342367169,0,0.164167464079095,0.56748166682099,0.292399974850665,0.439100230582101,0.268412837520744,0,0,20.4859645449955,19.5693419331023,0.213288250535234,0.464473343720877,4.76809606891745,7.86565746031036,8.00560957841533,11.7939888189787,10.9141684155238,11.5289268306808,10.8074139784116,15.7175612912509,11.1129529657898,23.3693046250098,18.1555961894743,13.7407478545513,0.379335801906163,0.685491075658373,2.25415471346161,0,0.969762435838129,0.911765658574141,2.21327879934901,3.69025369949005,4.23896565171712,3.94870924549762,0.592905254174298,2.16898637430922,2.94838492669805,5.39669069723649,6.28866376304359,4.3411888755435,4.83789118384698,6.32931502391783,5.18832725680113,2.47105271869273,8.62609239164127,4.83783231969054,0.624075346229121,1.76805214562978,2.33216637578486,0.964887042726734,18.4753190166605,0,0.162964976442026,0.339490171550376,1.40814148973101,5.52770649557992,8.09348379012447,7.02481132288076,7.25121662888479,5.09368786192182,5.89982644032702,7.70157579163969,8.46156411142888,12.150520920847,0,2.71952841909355,3.93411418415229,1.10374698521893,0.321101179975584,0.117211686592203,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,0,7.2389443456217,1.6025904330053,1.46598263418218,7.58862565673663,1.32745138339963,0,0,0.565815239267694,0.295301892880773,2.15204603560749,3.10113951801865,2.18120237686503,0.712994756769443,2.52829406348653,2.10837217149998,1.03135543248187,1.70219802876894,0,0,0,0,0,0.164549020602121,0.304464949114599,10.0908834467395,13.7690846061483,3.96951116498931,4.61681508236144,1.45317984026315,2.0506394475573,3.22305328808468,4.43180429311665,15.7399651780119,0.18542530201051,11.9609616558497,3.09580301944834,8.51894825900674,10.360265135258,11.7557035840082,7.32090154260872,0.509935289981566,1.6794174278839,1.10559979043539,14.3200592702267,0.158167996790568,1.82987520414164,4.75223499615926,8.99079672862215,9.38959024108564,10.1148259788616,10.9102561557443,8.11443420150492,15.9426417148905,11.8054469486516,0,0.747582730219894,0.66183396182839,0.194451188344048,0.258319646955462,0.337912250981556,0.938857909166032,0.651021924219751,0.209718688851422,0.483168241652012,0.288030006257865,28.441000856536,5.6763060281246,5.34096977257102,9.22437843142345,15.0382424360684,20.6628608972515,20.4332264183947,22.5964976577103,26.2512769865184,23.31928283643,28.2313318383153,31.9661848826388,26.8431038176519,32.1411480999315,5.8949899739955,6.65957860122194,6.9976808155391,2.85403847818933,4.63655025677257,4.87974436173073,6.77661009788881,9.4322086794789,13.5424468089548,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.798049746802062,0.341467211508268,0.486213434136588,1.67690530102386,1.47074806760011,2.00022055021454,0.824140228955577,3.20919209591815,1.76888048234658,1.01391719956096,1.13175804831646,1.31098110457835,1.53660365771686,1.608193130757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| |||
|short_description=p2@Mark2 | |||
}} | |||
Revision as of 18:24, 13 September 2013
| Short description: | p2@Mark2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Mark2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:895 |
| Association with transcript: | 0bp_to_ENSMUST00000025921, NM_001080390, uc008gkq.1_5end |
| EntrezGene: | Mark2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
