FFCP PHASE1:Mm9::chr1:130141009..130141020,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67812|HGNC=|MCL_coexpression_id=1533|UniProt=Q8VCH8,Q8C0Z0|association_with_transcript=251bp_to_ENSMUST00000027592,NM_026390,uc007cll.1_5end|description=CAGE_peak_5_at_Ubxn4_5end|id=chr1:130141009..130141020,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!6.82e-08!25;UBERON:0002330!6.82e-08!25;UBERON:0000160!4.53e-07!43;UBERON:0009854!8.62e-07!23;UBERON:0009856!8.62e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.39e-08,25;UBERON:0002330,2.39e-08,25;UBERON:0005256,3.13e-07,45;UBERON:0007023,3.52e-07,51;UBERON:0009854,3.98e-07,23;UBERON:0009856,3.98e-07,23;UBERON:0002107,6.45e-07,22;UBERON:0007499,6.45e-07,22;UBERON:0006925,6.45e-07,22;UBERON:0009497,6.45e-07,22;UBERON:0000015,6.45e-07,22;UBERON:0002423,6.45e-07,22;UBERON:0006235,6.45e-07,22;UBERON:0008835,6.45e-07,22;UBERON:0003894,6.45e-07,22;UBERON:0004161,6.45e-07,22;UBERON:0008836,6.45e-07,22|phase1_expression=0.320297694209588,2.79180326111489,4.09499315450582,3.0246421130683,1.00179145989269,1.6787927191189,1.16806320297763,0.903863264091034,1.83025338797167,1.17032263160997,0.513653904676515,1.03703806693937,0.684802919724823,0.611942816932982,0,1.21485160433896,0,0.473193248037357,0.411343300817216,0,2.8064285749853,0.992909512008853,2.61199789138935,1.43993180514066,2.75291137280604,0.57423196411502,0.430761996159075,2.15471232685889,1.71021077510736,1.26015064879965,2.66076612786366,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,3.34825304589526,0.7813353445238,1.0470474879476,1.76469446409304,2.04913645487534,1.94204141212461,1.00717454380462,1.62203089951223,2.38610777810186,0,0.65407546914134,1.5378032791413,2.72201858703997,1.25987779462826,1.43752564364972,0,0,0.336093799142464,3.34437266846731,0.85960031981627,2.06268836910977,0.606949382578793,1.05798195854407,1.26766280701236,0,0.889294796111139,0.449949858640699,0,0.7104801149461,1.79760066311043,1.53687322128622,1.03689612308478,0.540023753326763,0.841299845405528,0.285650984403804,0.220868540951614,0.734944795289724,0.191690942036473,0,1.10115880999389,0.766124028511126,1.0752457327937,1.05509030184155,0.731901148819277,1.56274011167028,2.23346399201105,1.12552522006336,1.22238598221448,0.589257170947335,1.28134512719193,0.372798891650601,2.34751199332871,0.906858721281426,2.6087803983151,6.88339101585109,7.47968467078526,9.71465744948071,9.09686984426737,9.85659151614138,2.24711072210803,2.38602451609281,0.779358013808606,1.41335829804136,0.422530259330042,2.56652954828636,0,7.11066703153331,0.216491041011214,0.760079596425296,0.505524445014783,3.08296475241462,1.8125651855302,1.63286352971307,0.173485326766136,0,0.230615497256059,1.20578112442098,1.99900802130698,1.88499886994513,3.95511948374998,2.74738778147832,2.65383165584962,1.13236794963186,0.662524555381181,0,1.86391761218122,1.17112318804619,0.41889341362691,2.29911349687732,0.718890747035522,1.79970819298022,1.01656181658452,1.19832511523858,0.915001205637253,0.879580464790051,0.173824320192276,1.02286182932132,1.0389402227978,0.811206315338788,0.916554274652847,1.49288364732112,2.52722758433675,5.47148825304832,0.650602214813519,0.919608417733892,0.360124259610698,0.90422890701429,1.29269348387523,0.896796041993948,0.562210347358373,2.84573707812917,0.215567992932842,0.378212160335639,0.703804496655795,0.219195732427575,0,1.0447564995665,0.61734640922383,0.199034266818493,2.1066395619397,1.80143534980301,1.98914449576915,0.414251545071004,0.469052119962192,1.2604344302271,0.473489471170421,0.393528463494808,0.462801338662135,0.697601834251224,0.804820204198858,1.28441876603886,0.493679549740441,1.47750717671186,0.810688095458557,0.584799949701329,1.3173006917463,1.34206418760372,1.47202963994889,0.720332286654991,3.96502539580558,2.3800550999719,0,0,1.03093969057675,2.01683524623343,1.77902435075896,2.28270751335071,2.84717436926707,3.45867804920423,2.5133520880027,2.78539060857611,0.974820435595601,1.79763881730844,1.94524244887225,2.58883655230677,0.189667900953082,0.228497025219458,3.38123207019241,0.814605311381257,0.387904974335251,1.96380295692892,0.758838445491087,2.36176236767363,2.19798218977925,2.46794327843601,8.59712618552732,0.667380422864376,0.196558995113203,0.899448449539415,1.21716072833102,0.72353147925725,1.01850340712568,3.16465751195892,2.2698931748505,1.92192989231657,4.31304619582064,2.97712758134803,5.30464044294753,3.78868316920668,9.68746033018326,6.75420929908714,0.739012760666419,0.37898282354097,0.162964976442026,0,0,0.837531287209079,0.952174563544055,1.75620283072019,1.41871629695572,0.8858587585951,1.11618338060241,0.983179888294428,1.20879487306127,1.3018415272336,1.50791283939272,0.54390568381871,2.95058563811422,2.48343071674259,1.60550589987792,1.28932855251423,0.983609672260053,2.27223834483936,1.57754109708128,0.780877488593277,1.07711698866399,1.19484398976276,0.891194696329576,1.69845918473299,1.21443210502468,2.0457910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| ||
|EntrezGene=67812 | |||
|HGNC= | |||
|MCL_coexpression_id=1533 | |||
|UniProt=Q8VCH8,Q8C0Z0 | |||
|association_with_transcript=251bp_to_ENSMUST00000027592,NM_026390,uc007cll.1_5end | |||
|description=CAGE_peak_5_at_Ubxn4_5end | |||
|id=chr1:130141009..130141020,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!6.82e-08!25;UBERON:0002330!6.82e-08!25;UBERON:0000160!4.53e-07!43;UBERON:0009854!8.62e-07!23;UBERON:0009856!8.62e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.39e-08,25;UBERON:0002330,2.39e-08,25;UBERON:0005256,3.13e-07,45;UBERON:0007023,3.52e-07,51;UBERON:0009854,3.98e-07,23;UBERON:0009856,3.98e-07,23;UBERON:0002107,6.45e-07,22;UBERON:0007499,6.45e-07,22;UBERON:0006925,6.45e-07,22;UBERON:0009497,6.45e-07,22;UBERON:0000015,6.45e-07,22;UBERON:0002423,6.45e-07,22;UBERON:0006235,6.45e-07,22;UBERON:0008835,6.45e-07,22;UBERON:0003894,6.45e-07,22;UBERON:0004161,6.45e-07,22;UBERON:0008836,6.45e-07,22 | |||
|phase1_expression=0.320297694209588,2.79180326111489,4.09499315450582,3.0246421130683,1.00179145989269,1.6787927191189,1.16806320297763,0.903863264091034,1.83025338797167,1.17032263160997,0.513653904676515,1.03703806693937,0.684802919724823,0.611942816932982,0,1.21485160433896,0,0.473193248037357,0.411343300817216,0,2.8064285749853,0.992909512008853,2.61199789138935,1.43993180514066,2.75291137280604,0.57423196411502,0.430761996159075,2.15471232685889,1.71021077510736,1.26015064879965,2.66076612786366,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,3.34825304589526,0.7813353445238,1.0470474879476,1.76469446409304,2.04913645487534,1.94204141212461,1.00717454380462,1.62203089951223,2.38610777810186,0,0.65407546914134,1.5378032791413,2.72201858703997,1.25987779462826,1.43752564364972,0,0,0.336093799142464,3.34437266846731,0.85960031981627,2.06268836910977,0.606949382578793,1.05798195854407,1.26766280701236,0,0.889294796111139,0.449949858640699,0,0.7104801149461,1.79760066311043,1.53687322128622,1.03689612308478,0.540023753326763,0.841299845405528,0.285650984403804,0.220868540951614,0.734944795289724,0.191690942036473,0,1.10115880999389,0.766124028511126,1.0752457327937,1.05509030184155,0.731901148819277,1.56274011167028,2.23346399201105,1.12552522006336,1.22238598221448,0.589257170947335,1.28134512719193,0.372798891650601,2.34751199332871,0.906858721281426,2.6087803983151,6.88339101585109,7.47968467078526,9.71465744948071,9.09686984426737,9.85659151614138,2.24711072210803,2.38602451609281,0.779358013808606,1.41335829804136,0.422530259330042,2.56652954828636,0,7.11066703153331,0.216491041011214,0.760079596425296,0.505524445014783,3.08296475241462,1.8125651855302,1.63286352971307,0.173485326766136,0,0.230615497256059,1.20578112442098,1.99900802130698,1.88499886994513,3.95511948374998,2.74738778147832,2.65383165584962,1.13236794963186,0.662524555381181,0,1.86391761218122,1.17112318804619,0.41889341362691,2.29911349687732,0.718890747035522,1.79970819298022,1.01656181658452,1.19832511523858,0.915001205637253,0.879580464790051,0.173824320192276,1.02286182932132,1.0389402227978,0.811206315338788,0.916554274652847,1.49288364732112,2.52722758433675,5.47148825304832,0.650602214813519,0.919608417733892,0.360124259610698,0.90422890701429,1.29269348387523,0.896796041993948,0.562210347358373,2.84573707812917,0.215567992932842,0.378212160335639,0.703804496655795,0.219195732427575,0,1.0447564995665,0.61734640922383,0.199034266818493,2.1066395619397,1.80143534980301,1.98914449576915,0.414251545071004,0.469052119962192,1.2604344302271,0.473489471170421,0.393528463494808,0.462801338662135,0.697601834251224,0.804820204198858,1.28441876603886,0.493679549740441,1.47750717671186,0.810688095458557,0.584799949701329,1.3173006917463,1.34206418760372,1.47202963994889,0.720332286654991,3.96502539580558,2.3800550999719,0,0,1.03093969057675,2.01683524623343,1.77902435075896,2.28270751335071,2.84717436926707,3.45867804920423,2.5133520880027,2.78539060857611,0.974820435595601,1.79763881730844,1.94524244887225,2.58883655230677,0.189667900953082,0.228497025219458,3.38123207019241,0.814605311381257,0.387904974335251,1.96380295692892,0.758838445491087,2.36176236767363,2.19798218977925,2.46794327843601,8.59712618552732,0.667380422864376,0.196558995113203,0.899448449539415,1.21716072833102,0.72353147925725,1.01850340712568,3.16465751195892,2.2698931748505,1.92192989231657,4.31304619582064,2.97712758134803,5.30464044294753,3.78868316920668,9.68746033018326,6.75420929908714,0.739012760666419,0.37898282354097,0.162964976442026,0,0,0.837531287209079,0.952174563544055,1.75620283072019,1.41871629695572,0.8858587585951,1.11618338060241,0.983179888294428,1.20879487306127,1.3018415272336,1.50791283939272,0.54390568381871,2.95058563811422,2.48343071674259,1.60550589987792,1.28932855251423,0.983609672260053,2.27223834483936,1.57754109708128,0.780877488593277,1.07711698866399,1.19484398976276,0.891194696329576,1.69845918473299,1.21443210502468,2.04579100537918,2.37172666767914,0.642642632843614,1.27746076687442,0.712262414669021,0.488660878060728,1.64970122972535,6.63725691699814,0.242780636154981,0.604647113929502,2.45186603682668,5.61073596473468,4.30409207121498,2.84271122485043,3.63533729477506,3.20847640546249,7.58488219045958,9.48767477174989,3.09406629744561,4.08527526904546,0.540183282093931,0.776152102696527,1.07168517515796,1.95074257006501,1.24858172321449,1.31639216481697,1.2178597964584,2.58138878870081,2.33015277950202,5.29268155331909,2.30840754118072,1.29171541356724,1.56813604813205,1.3130957840345,0.820704498725306,2.33184669303881,1.48340241608408,0.683483523191411,0.619160603889667,0.740778109478847,0.376736914009382,0.410082683163076,0.457556346413045,1.69978429993855,2.09927178485487,1.65839968565309,0.954670618015114,0.158167996790568,0.203319467126849,0.540026704109006,0.418176592028937,1.09181281873089,0.809186078308924,0.991841468704031,0.785267825952089,1.03691978633434,3.72803587852155,14.6560164057889,0.299033092087958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| |||
|short_description=p5@Ubxn4 | |||
}} |
Revision as of 18:43, 13 September 2013
Short description: | p5@Ubxn4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ubxn4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1533 |
Association with transcript: | 251bp_to_ENSMUST00000027592, NM_026390, uc007cll.1_5end |
EntrezGene: | Ubxn4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 2.39e-08 | 25 |
exocrine system | 2.39e-08 | 25 |
trunk mesenchyme | 3.13e-07 | 45 |
adult organism | 3.52e-07 | 51 |
digestive tract diverticulum | 3.98e-07 | 23 |
sac | 3.98e-07 | 23 |
liver | 6.45e-07 | 22 |
epithelial sac | 6.45e-07 | 22 |
digestive gland | 6.45e-07 | 22 |
epithelium of foregut-midgut junction | 6.45e-07 | 22 |
anatomical boundary | 6.45e-07 | 22 |
hepatobiliary system | 6.45e-07 | 22 |
foregut-midgut junction | 6.45e-07 | 22 |
hepatic diverticulum | 6.45e-07 | 22 |
liver primordium | 6.45e-07 | 22 |
septum transversum | 6.45e-07 | 22 |
liver bud | 6.45e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.