FFCP PHASE1:Mm9::chr6:70672832..70672845,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=63|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:70672832..70672845,+|id=chr6:70672832..70672845,+|ontology_enrichment_celltype=CL:0000553!5.82e-10!6;CL:0000556!5.82e-10!6|ontology_enrichment_celltype_v019_2=CL:0000553,2.11e-19,6;CL:0000556,2.11e-19,6;CL:0000945,1.55e-13,1;CL:0000236,1.55e-13,1;CL:0000826,1.55e-13,1;CL:0000050,3.38e-13,9;CL:0000839,2.36e-09,13;CL:0002031,1.96e-08,25;CL:0000763,1.01e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003887!1.83e-09!10;UBERON:0002193!2.29e-08!48;UBERON:0002465!4.45e-08!3;UBERON:0002113!1.58e-07!14;UBERON:0003918!1.58e-07!14;UBERON:0005095!1.58e-07!14;UBERON:0007687!1.58e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0002465,8.93e-18,3;UBERON:0000029,3.62e-14,1;UBERON:0001097,3.62e-14,1;UBERON:0003968,3.62e-14,1;UBERON:0001467,3.62e-14,1;UBERON:0003199,1.16e-13,1;UBERON:0002193,1.28e-09,48;UBERON:0002405,1.28e-09,48;UBERON:0002371,1.01e-07,16;UBERON:0001962,1.76e-07,2;UBERON:0001961,1.76e-07,2;UBERON:0001744,1.76e-07,2|phase1_expression=0,0,0,0,0,0.671517087647559,0,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,0,2.83915948822414,2.74228867211478,0.42438965179803,0.0850432901510698,0,0,0.799962113967033,1.37645568640302,0,0,0.646413698057667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,5.95557132388495,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,1.70870880797853,0.206386867963223,0,0,0.27338845544205,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0,0,0.389762468933385,0,0.39736270956253,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:70672832..70672845,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:70672832..70672845,+ | |||
|id=chr6:70672832..70672845,+ | |||
|ontology_enrichment_celltype=CL:0000553!5.82e-10!6;CL:0000556!5.82e-10!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.11e-19,6;CL:0000556,2.11e-19,6;CL:0000945,1.55e-13,1;CL:0000236,1.55e-13,1;CL:0000826,1.55e-13,1;CL:0000050,3.38e-13,9;CL:0000839,2.36e-09,13;CL:0002031,1.96e-08,25;CL:0000763,1.01e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003887!1.83e-09!10;UBERON:0002193!2.29e-08!48;UBERON:0002465!4.45e-08!3;UBERON:0002113!1.58e-07!14;UBERON:0003918!1.58e-07!14;UBERON:0005095!1.58e-07!14;UBERON:0007687!1.58e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,8.93e-18,3;UBERON:0000029,3.62e-14,1;UBERON:0001097,3.62e-14,1;UBERON:0003968,3.62e-14,1;UBERON:0001467,3.62e-14,1;UBERON:0003199,1.16e-13,1;UBERON:0002193,1.28e-09,48;UBERON:0002405,1.28e-09,48;UBERON:0002371,1.01e-07,16;UBERON:0001962,1.76e-07,2;UBERON:0001961,1.76e-07,2;UBERON:0001744,1.76e-07,2 | |||
|phase1_expression=0,0,0,0,0,0.671517087647559,0,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,0,2.83915948822414,2.74228867211478,0.42438965179803,0.0850432901510698,0,0,0.799962113967033,1.37645568640302,0,0,0.646413698057667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,5.95557132388495,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,1.70870880797853,0.206386867963223,0,0,0.27338845544205,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0,0,0.389762468933385,0,0.39736270956253,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:70672832..70672845,+ | |||
}} |
Revision as of 10:30, 14 September 2013
Short description: | p@chr6:70672832..70672845, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:70672832..70672845, + |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.11e-19 | 6 |
megakaryocyte | 2.11e-19 | 6 |
lymphocyte of B lineage | 1.55e-13 | 1 |
B cell | 1.55e-13 | 1 |
pro-B cell | 1.55e-13 | 1 |
megakaryocyte-erythroid progenitor cell | 3.38e-13 | 9 |
myeloid lineage restricted progenitor cell | 2.36e-09 | 13 |
hematopoietic lineage restricted progenitor cell | 1.96e-08 | 25 |
myeloid cell | 1.01e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 8.93e-18 | 3 |
lymph node | 3.62e-14 | 1 |
axillary lymph node | 3.62e-14 | 1 |
peripheral lymph node | 3.62e-14 | 1 |
shoulder | 3.62e-14 | 1 |
egg chamber | 1.16e-13 | 1 |
hemolymphoid system | 1.28e-09 | 48 |
immune system | 1.28e-09 | 48 |
bone marrow | 1.01e-07 | 16 |
gut-associated lymphoid tissue | 1.76e-07 | 2 |
mucosa-associated lymphoid tissue | 1.76e-07 | 2 |
lymphoid tissue | 1.76e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.