FFCP PHASE1:Mm9::chr1:34031496..34031516,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=31|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:34031496..34031516,+|id=chr1:34031496..34031516,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,7.85e-07,3;CL:0000351,7.85e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003100!6.91e-08!11;UBERON:0000014!5.72e-07!5;UBERON:0001003!5.72e-07!5;UBERON:0002097!5.72e-07!5;UBERON:0002199!5.72e-07!5;UBERON:0007029!5.72e-07!5;UBERON:0007376!5.72e-07!5;UBERON:0002416!5.72e-07!5;UBERON:0007383!5.72e-07!5;UBERON:0007023!9.03e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.07e-15,3;UBERON:0000478,4.07e-15,3;UBERON:0000158,4.07e-15,3;UBERON:0000014,3.31e-14,5;UBERON:0001003,3.31e-14,5;UBERON:0002097,3.31e-14,5;UBERON:0002199,3.31e-14,5;UBERON:0007029,3.31e-14,5;UBERON:0007376,3.31e-14,5;UBERON:0002416,3.31e-14,5;UBERON:0007383,3.31e-14,5;UBERON:0001987,1.07e-10,2;UBERON:0003124,1.07e-10,2;UBERON:0004340,1.07e-10,2;UBERON:0003100,2.03e-10,11;UBERON:0001911,2.77e-10,2;UBERON:0000076,2.77e-10,2;UBERON:0005333,2.77e-10,2;UBERON:0008425,2.77e-10,2;UBERON:0005311,2.77e-10,2;UBERON:0007023,2.80e-09,51;UBERON:0003102,4.84e-09,22;UBERON:0000358,7.85e-07,3;UBERON:0000307,7.85e-07,3;UBERON:0007010,7.85e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0,0,0,0,0,0.125666591329675,12.1125534189843,4.33798070759735,1.76922110389975,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0.510914110417183,0,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0,0,0.746441823660558,0,27.1469994093551,0,0,0,0,0,0,0,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.0810688095458557,0.292399974850665,0.219550115291051,0.536825675041487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,2.95058563811422,4.41498794087572,0.160550589987792,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7737366450968,66.7271023221033,0,3.95727007059552,0.484393280087717,1.14594557363496,1.3130957840345,1.31312719796049,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0.56369293868419,0,0.165458490457098,0,0,0,0,0,0,0,0.576060012515731,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,1.33191572024439,0.269141569828427,2.51826924546118,2.70465431645067,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,0.754505365544305,0,0.256100609619477,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0.476872379894642,0,0.188218760830661,0.338458431566706,0.182927972872773,0,0.135804113845862,1.12228454331548,0.474540072496697,0.29551344712669,0.409231043169689,0.154936841185966,0,0,0.233931608445408,1.07435527024149,0.765153328275374,0.882365676478062,0.927471342481686|short_description=p@chr1:34031496..34031516,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=31 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:34031496..34031516,+ | |||
|id=chr1:34031496..34031516,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,7.85e-07,3;CL:0000351,7.85e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003100!6.91e-08!11;UBERON:0000014!5.72e-07!5;UBERON:0001003!5.72e-07!5;UBERON:0002097!5.72e-07!5;UBERON:0002199!5.72e-07!5;UBERON:0007029!5.72e-07!5;UBERON:0007376!5.72e-07!5;UBERON:0002416!5.72e-07!5;UBERON:0007383!5.72e-07!5;UBERON:0007023!9.03e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.07e-15,3;UBERON:0000478,4.07e-15,3;UBERON:0000158,4.07e-15,3;UBERON:0000014,3.31e-14,5;UBERON:0001003,3.31e-14,5;UBERON:0002097,3.31e-14,5;UBERON:0002199,3.31e-14,5;UBERON:0007029,3.31e-14,5;UBERON:0007376,3.31e-14,5;UBERON:0002416,3.31e-14,5;UBERON:0007383,3.31e-14,5;UBERON:0001987,1.07e-10,2;UBERON:0003124,1.07e-10,2;UBERON:0004340,1.07e-10,2;UBERON:0003100,2.03e-10,11;UBERON:0001911,2.77e-10,2;UBERON:0000076,2.77e-10,2;UBERON:0005333,2.77e-10,2;UBERON:0008425,2.77e-10,2;UBERON:0005311,2.77e-10,2;UBERON:0007023,2.80e-09,51;UBERON:0003102,4.84e-09,22;UBERON:0000358,7.85e-07,3;UBERON:0000307,7.85e-07,3;UBERON:0007010,7.85e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0,0,0,0,0,0.125666591329675,12.1125534189843,4.33798070759735,1.76922110389975,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0.510914110417183,0,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0,0,0.746441823660558,0,27.1469994093551,0,0,0,0,0,0,0,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.0810688095458557,0.292399974850665,0.219550115291051,0.536825675041487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,2.95058563811422,4.41498794087572,0.160550589987792,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7737366450968,66.7271023221033,0,3.95727007059552,0.484393280087717,1.14594557363496,1.3130957840345,1.31312719796049,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0.56369293868419,0,0.165458490457098,0,0,0,0,0,0,0,0.576060012515731,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,1.33191572024439,0.269141569828427,2.51826924546118,2.70465431645067,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,0.754505365544305,0,0.256100609619477,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0.476872379894642,0,0.188218760830661,0.338458431566706,0.182927972872773,0,0.135804113845862,1.12228454331548,0.474540072496697,0.29551344712669,0.409231043169689,0.154936841185966,0,0,0.233931608445408,1.07435527024149,0.765153328275374,0.882365676478062,0.927471342481686 | |||
|short_description=p@chr1:34031496..34031516,+ | |||
}} |
Revision as of 20:14, 13 September 2013
Short description: | p@chr1:34031496..34031516, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:34031496..34031516, + |
Coexpression cluster: | MCL_coexpression_mm9:31 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 7.85e-07 | 3 |
trophoblast cell | 7.85e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.07e-15 | 3 |
extraembryonic structure | 4.07e-15 | 3 |
membranous layer | 4.07e-15 | 3 |
zone of skin | 3.31e-14 | 5 |
skin epidermis | 3.31e-14 | 5 |
skin of body | 3.31e-14 | 5 |
integument | 3.31e-14 | 5 |
surface | 3.31e-14 | 5 |
outer epithelium | 3.31e-14 | 5 |
integumental system | 3.31e-14 | 5 |
enveloping layer of ectoderm | 3.31e-14 | 5 |
placenta | 1.07e-10 | 2 |
chorion | 1.07e-10 | 2 |
allantois | 1.07e-10 | 2 |
female organism | 2.03e-10 | 11 |
mammary gland | 2.77e-10 | 2 |
external ectoderm | 2.77e-10 | 2 |
mammary bud | 2.77e-10 | 2 |
mammary ridge | 2.77e-10 | 2 |
mammary placode | 2.77e-10 | 2 |
adult organism | 2.80e-09 | 51 |
surface structure | 4.84e-09 | 22 |
blastocyst | 7.85e-07 | 3 |
blastula | 7.85e-07 | 3 |
cleaving embryo | 7.85e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.