FFCP PHASE1:Mm9::chr1:135936977..135936983,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=148|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:135936977..135936983,+|id=chr1:135936977..135936983,+|ontology_enrichment_celltype=CL:0002453!6.58e-08!8|ontology_enrichment_celltype_v019_2=CL:0002605,1.73e-30,2;CL:0002604,1.73e-30,2;CL:0002453,3.62e-17,8;CL:0000333,6.72e-14,10;CL:0000095,6.72e-14,10;CL:0000243,6.72e-14,10;CL:0000123,6.72e-14,10;CL:0000125,6.72e-14,10;CL:0000030,6.72e-14,10;CL:0000339,6.72e-14,10;CL:0000128,6.82e-11,6;CL:0000126,6.82e-11,6;CL:0000127,6.82e-11,6;CL:0000878,2.13e-08,2;CL:0000129,2.13e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000026!7.23e-09!13;UBERON:0004708!7.23e-09!13;UBERON:0002101!7.23e-09!13;UBERON:0004357!7.23e-09!13;UBERON:0009872!7.23e-09!13;UBERON:0004347!7.23e-09!13;UBERON:0005732!7.23e-09!13;UBERON:0005733!7.23e-09!13;UBERON:0000947!1.04e-07!4;UBERON:0001637!1.04e-07!4;UBERON:0003509!1.04e-07!4;UBERON:0004573!1.04e-07!4;UBERON:0004571!1.04e-07!4;UBERON:0010191!1.04e-07!4;UBERON:0004572!1.04e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.78e-09,7;UBERON:0003022,1.78e-09,7;UBERON:0002421,1.78e-09,7;UBERON:0000349,1.78e-09,7;UBERON:0002600,1.78e-09,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0.367093504323363,0,0.218025156380447,4.61340983742391,7.58276606389705,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0,0,0.180062129805349,0,0,0,0,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0,0.469380496577004,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0.906284817968409,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0.429742108096597,1.53030665655075,1.54413993383661,0.927471342481686|short_description=p@chr1:135936977..135936983,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=148 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:135936977..135936983,+ | |||
|id=chr1:135936977..135936983,+ | |||
|ontology_enrichment_celltype=CL:0002453!6.58e-08!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.73e-30,2;CL:0002604,1.73e-30,2;CL:0002453,3.62e-17,8;CL:0000333,6.72e-14,10;CL:0000095,6.72e-14,10;CL:0000243,6.72e-14,10;CL:0000123,6.72e-14,10;CL:0000125,6.72e-14,10;CL:0000030,6.72e-14,10;CL:0000339,6.72e-14,10;CL:0000128,6.82e-11,6;CL:0000126,6.82e-11,6;CL:0000127,6.82e-11,6;CL:0000878,2.13e-08,2;CL:0000129,2.13e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000026!7.23e-09!13;UBERON:0004708!7.23e-09!13;UBERON:0002101!7.23e-09!13;UBERON:0004357!7.23e-09!13;UBERON:0009872!7.23e-09!13;UBERON:0004347!7.23e-09!13;UBERON:0005732!7.23e-09!13;UBERON:0005733!7.23e-09!13;UBERON:0000947!1.04e-07!4;UBERON:0001637!1.04e-07!4;UBERON:0003509!1.04e-07!4;UBERON:0004573!1.04e-07!4;UBERON:0004571!1.04e-07!4;UBERON:0010191!1.04e-07!4;UBERON:0004572!1.04e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.78e-09,7;UBERON:0003022,1.78e-09,7;UBERON:0002421,1.78e-09,7;UBERON:0000349,1.78e-09,7;UBERON:0002600,1.78e-09,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0.367093504323363,0,0.218025156380447,4.61340983742391,7.58276606389705,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0,0,0.180062129805349,0,0,0,0,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0,0.469380496577004,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0.906284817968409,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0.429742108096597,1.53030665655075,1.54413993383661,0.927471342481686 | |||
|short_description=p@chr1:135936977..135936983,+ | |||
}} |
Revision as of 18:55, 13 September 2013
Short description: | p@chr1:135936977..135936983, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135936977..135936983, + |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.73e-30 | 2 |
astrocyte of the hippocampus | 1.73e-30 | 2 |
oligodendrocyte precursor cell | 3.62e-17 | 8 |
migratory neural crest cell | 6.72e-14 | 10 |
neuron associated cell | 6.72e-14 | 10 |
glial cell (sensu Vertebrata) | 6.72e-14 | 10 |
neuron associated cell (sensu Vertebrata) | 6.72e-14 | 10 |
glial cell | 6.72e-14 | 10 |
glioblast | 6.72e-14 | 10 |
glioblast (sensu Vertebrata) | 6.72e-14 | 10 |
oligodendrocyte | 6.82e-11 | 6 |
macroglial cell | 6.82e-11 | 6 |
astrocyte | 6.82e-11 | 6 |
central nervous system macrophage | 2.13e-08 | 2 |
microglial cell | 2.13e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.78e-09 | 7 |
lobe parts of cerebral cortex | 1.78e-09 | 7 |
hippocampal formation | 1.78e-09 | 7 |
limbic system | 1.78e-09 | 7 |
limbic lobe | 1.78e-09 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.