FFCP PHASE1:Mm9::chr7:110961038..110961042,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=124|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:110961038..110961042,+|id=chr7:110961038..110961042,+|ontology_enrichment_celltype=CL:0000553!6.62e-07!6;CL:0000556!6.62e-07!6|ontology_enrichment_celltype_v019_2=CL:0002027,1.42e-20,3;CL:0002006,1.42e-20,3;CL:0002024,1.42e-20,3;CL:0000553,1.39e-10,6;CL:0000556,1.39e-10,6;CL:0000050,3.22e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.17e-13,22;UBERON:0007499,2.17e-13,22;UBERON:0006925,2.17e-13,22;UBERON:0009497,2.17e-13,22;UBERON:0000015,2.17e-13,22;UBERON:0002423,2.17e-13,22;UBERON:0006235,2.17e-13,22;UBERON:0008835,2.17e-13,22;UBERON:0003894,2.17e-13,22;UBERON:0004161,2.17e-13,22;UBERON:0008836,2.17e-13,22;UBERON:0009854,8.73e-13,23;UBERON:0009856,8.73e-13,23;UBERON:0002365,1.01e-11,25;UBERON:0002330,1.01e-11,25;UBERON:0005172,1.15e-11,49;UBERON:0005173,1.15e-11,49;UBERON:0002417,1.15e-11,49;UBERON:0000916,1.15e-11,49;UBERON:0002106,5.87e-10,6;UBERON:0004457,5.87e-10,6;UBERON:0000042,5.87e-10,6;UBERON:0004854,5.87e-10,6;UBERON:0009034,5.87e-10,6;UBERON:0002095,5.87e-10,6;UBERON:0004782,5.87e-10,6;UBERON:0003281,5.87e-10,6;UBERON:0009664,5.87e-10,6;UBERON:0002296,5.87e-10,6;UBERON:0005602,5.87e-10,6;UBERON:0001179,5.87e-10,6;UBERON:0006293,5.87e-10,6;UBERON:0009569,2.29e-08,66;UBERON:0005177,8.56e-07,79|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.66152452176024,6.2767332890846,13.2916756844348,0.473193248037357,0.274228867211478,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405017814995072,0.210324961351382,0.285650984403804,0,0,0,0.919218786610021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520455980298408,0.608930956624282,0.461230994512117,0.150722640552623,0,0,0.247194967734374,0,0.884610551949874,0,0.662524555381181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0.229902104433473,0,0.150704817835715,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0.0810688095458557,0.292399974850665,0.219550115291051,0.134206418760372,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,1.96558995113203,1.12431056192427,1.21716072833102,1.92941727801933,5.60176873919124,0.863088412352432,0.324270453550071,1.92192989231657,1.43768206527355,0,0.312037673114561,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0,0.491589944147214,0.345369963731791,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.643011105094777,0,0.713475270408282,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,1.19609616558497,0.412773735926445,0.370389054739423,1.31857919903284,0.27338845544205,6.63456702298916,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0,0,0,0,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53660245178721,0.486213434136588,0.209613162627982,0.367687016900028,0,0.618105171716683,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.38581844092741,0.412085900803307,0,0.342869252385415,0,0.715308569841963,0.581385666529314,0.282328141245992,0.592302255241736,0.548783918618318,0.526139422875686,0.407412341537585,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0,0.385813221962283,0,0.467863216890817,0,0,0.220591419119515,0.231867835620421|short_description=p@chr7:110961038..110961042,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=124 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:110961038..110961042,+ | |||
|id=chr7:110961038..110961042,+ | |||
|ontology_enrichment_celltype=CL:0000553!6.62e-07!6;CL:0000556!6.62e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,1.42e-20,3;CL:0002006,1.42e-20,3;CL:0002024,1.42e-20,3;CL:0000553,1.39e-10,6;CL:0000556,1.39e-10,6;CL:0000050,3.22e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.17e-13,22;UBERON:0007499,2.17e-13,22;UBERON:0006925,2.17e-13,22;UBERON:0009497,2.17e-13,22;UBERON:0000015,2.17e-13,22;UBERON:0002423,2.17e-13,22;UBERON:0006235,2.17e-13,22;UBERON:0008835,2.17e-13,22;UBERON:0003894,2.17e-13,22;UBERON:0004161,2.17e-13,22;UBERON:0008836,2.17e-13,22;UBERON:0009854,8.73e-13,23;UBERON:0009856,8.73e-13,23;UBERON:0002365,1.01e-11,25;UBERON:0002330,1.01e-11,25;UBERON:0005172,1.15e-11,49;UBERON:0005173,1.15e-11,49;UBERON:0002417,1.15e-11,49;UBERON:0000916,1.15e-11,49;UBERON:0002106,5.87e-10,6;UBERON:0004457,5.87e-10,6;UBERON:0000042,5.87e-10,6;UBERON:0004854,5.87e-10,6;UBERON:0009034,5.87e-10,6;UBERON:0002095,5.87e-10,6;UBERON:0004782,5.87e-10,6;UBERON:0003281,5.87e-10,6;UBERON:0009664,5.87e-10,6;UBERON:0002296,5.87e-10,6;UBERON:0005602,5.87e-10,6;UBERON:0001179,5.87e-10,6;UBERON:0006293,5.87e-10,6;UBERON:0009569,2.29e-08,66;UBERON:0005177,8.56e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.66152452176024,6.2767332890846,13.2916756844348,0.473193248037357,0.274228867211478,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405017814995072,0.210324961351382,0.285650984403804,0,0,0,0.919218786610021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520455980298408,0.608930956624282,0.461230994512117,0.150722640552623,0,0,0.247194967734374,0,0.884610551949874,0,0.662524555381181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0.229902104433473,0,0.150704817835715,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0.0810688095458557,0.292399974850665,0.219550115291051,0.134206418760372,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,1.96558995113203,1.12431056192427,1.21716072833102,1.92941727801933,5.60176873919124,0.863088412352432,0.324270453550071,1.92192989231657,1.43768206527355,0,0.312037673114561,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0,0.491589944147214,0.345369963731791,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.643011105094777,0,0.713475270408282,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,1.19609616558497,0.412773735926445,0.370389054739423,1.31857919903284,0.27338845544205,6.63456702298916,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0,0,0,0,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53660245178721,0.486213434136588,0.209613162627982,0.367687016900028,0,0.618105171716683,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.38581844092741,0.412085900803307,0,0.342869252385415,0,0.715308569841963,0.581385666529314,0.282328141245992,0.592302255241736,0.548783918618318,0.526139422875686,0.407412341537585,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0,0.385813221962283,0,0.467863216890817,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr7:110961038..110961042,+ | |||
}} |
Revision as of 11:22, 14 September 2013
Short description: | p@chr7:110961038..110961042, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:110961038..110961042, + |
Coexpression cluster: | MCL_coexpression_mm9:124 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 1.42e-20 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.42e-20 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.42e-20 | 3 |
megakaryocyte progenitor cell | 1.39e-10 | 6 |
megakaryocyte | 1.39e-10 | 6 |
megakaryocyte-erythroid progenitor cell | 3.22e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
liver | 2.17e-13 | 22 |
epithelial sac | 2.17e-13 | 22 |
digestive gland | 2.17e-13 | 22 |
epithelium of foregut-midgut junction | 2.17e-13 | 22 |
anatomical boundary | 2.17e-13 | 22 |
hepatobiliary system | 2.17e-13 | 22 |
foregut-midgut junction | 2.17e-13 | 22 |
hepatic diverticulum | 2.17e-13 | 22 |
liver primordium | 2.17e-13 | 22 |
septum transversum | 2.17e-13 | 22 |
liver bud | 2.17e-13 | 22 |
digestive tract diverticulum | 8.73e-13 | 23 |
sac | 8.73e-13 | 23 |
exocrine gland | 1.01e-11 | 25 |
exocrine system | 1.01e-11 | 25 |
abdomen element | 1.15e-11 | 49 |
abdominal segment element | 1.15e-11 | 49 |
abdominal segment of trunk | 1.15e-11 | 49 |
abdomen | 1.15e-11 | 49 |
spleen | 5.87e-10 | 6 |
cavity lining | 5.87e-10 | 6 |
serous membrane | 5.87e-10 | 6 |
gastrointestinal system mesentery | 5.87e-10 | 6 |
stomach region | 5.87e-10 | 6 |
mesentery | 5.87e-10 | 6 |
gastrointestinal system serosa | 5.87e-10 | 6 |
mesentery of stomach | 5.87e-10 | 6 |
gut mesentery | 5.87e-10 | 6 |
dorsal mesentery | 5.87e-10 | 6 |
dorsal mesogastrium | 5.87e-10 | 6 |
peritoneal cavity | 5.87e-10 | 6 |
spleen primordium | 5.87e-10 | 6 |
subdivision of trunk | 2.29e-08 | 66 |
trunk region element | 8.56e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.